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PDB: 2662 件

8AQ9
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Domain 2 of zinc-loaded Caenorhabditis elegans MTL-1
分子名称: Metallothionein-1, ZINC ION
著者Leszczyszyn, O.I, Sturzenbaum, S.R, Blindauer, C.A.
登録日2022-08-11
公開日2024-01-17
実験手法SOLUTION NMR
主引用文献Juggling cadmium detoxification and zinc homeostasis: A division of labour between the two C. elegans metallothioneins.
Chemosphere, 350, 2023
4IZQ
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GGGCATGCCC in the A-DNA Form
分子名称: DNA (5'-D(*GP*GP*GP*CP*AP*TP*GP*CP*CP*C)-3')
著者Hall, J.P, Ruiz-Morte, S, Murray, C.A, Cardin, C.J.
登録日2013-01-30
公開日2014-02-05
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.04 Å)
主引用文献GGGCATGCCC in the A-DNA Form
To be Published
4L7Z
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Crystal Structure of Chloroflexus aurantiacus malyl-CoA lyase
分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, HpcH/HpaI aldolase
著者Zarzycki, J, Kerfeld, C.A.
登録日2013-06-14
公開日2013-12-04
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.502 Å)
主引用文献The crystal structures of the tri-functional Chloroflexus aurantiacus and bi-functional Rhodobacter sphaeroides malyl-CoA lyases and comparison with CitE-like superfamily enzymes and malate synthases.
Bmc Struct.Biol., 13, 2013
6Q2J
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Cryo-EM structure of extracellular dimeric complex of RET/GFRAL/GDF15
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, GDNF family receptor alpha-like, ...
著者Li, J, Shang, G.J, Chen, Y.J, Brautigam, C.A, Liou, J, Zhang, X.W, Bai, X.C.
登録日2019-08-08
公開日2019-10-02
最終更新日2020-07-29
実験手法ELECTRON MICROSCOPY (4.1 Å)
主引用文献Cryo-EM analyses reveal the common mechanism and diversification in the activation of RET by different ligands.
Elife, 8, 2019
4KX3
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Structure of murine cytosolic 5'-nucleotidase III complexed with thymidine monophosphate
分子名称: 1,2-ETHANEDIOL, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, BETA-MERCAPTOETHANOL, ...
著者Bitto, E, Bingman, C.A, Grobosky, C.L.
登録日2013-05-24
公開日2013-06-05
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Structure of murine cytosolic 5'-nucleotidase III complexed with thymidine monophosphate
To be Published
4J3Y
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Crystal structure of XIAP-BIR2 domain
分子名称: E3 ubiquitin-protein ligase XIAP, ZINC ION
著者Lukacs, C.M, Janson, C.A.
登録日2013-02-06
公開日2013-09-25
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.45 Å)
主引用文献The structure of XIAP BIR2: understanding the selectivity of the BIR domains.
Acta Crystallogr.,Sect.D, 69, 2013
2K14
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Solution structure of the soluble domain of the NfeD protein YuaF from Bacillus subtilis
分子名称: YuaF protein
著者Walker, C.A, Hinderhofer, M, Witte, D.J, Boos, W, Moller, H.M.
登録日2008-02-20
公開日2008-08-26
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Solution structure of the soluble domain of the NfeD protein YuaF from Bacillus subtilis.
J.Biomol.Nmr, 42, 2008
1JDR
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Crystal Structure of a Proximal Domain Potassium Binding Variant of Cytochrome c Peroxidase
分子名称: Cytochrome c Peroxidase, POTASSIUM ION, PROTOPORPHYRIN IX CONTAINING FE
著者Bonagura, C.A, Sundaramoorthy, M, Bhaskar, B, Poulos, T.L.
登録日2001-06-14
公開日2001-06-27
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献The effects of an engineered cation site on the structure, activity, and EPR properties of cytochrome c peroxidase.
Biochemistry, 38, 1999
6PYS
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Human PI3Kalpha in complex with Compound 2-10 ((3S)-3-benzyl-3-methyl-5-[5-(2-methylpyrimidin-5-yl)pyrazolo[1,5-a]pyrimidin-3-yl]-1,3-dihydro-2H-indol-2-one)
分子名称: (3S)-3-benzyl-3-methyl-5-[5-(2-methylpyrimidin-5-yl)pyrazolo[1,5-a]pyrimidin-3-yl]-1,3-dihydro-2H-indol-2-one, GLYCEROL, Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit alpha isoform
著者Lesburg, C.A, Augustin, M.A.
登録日2019-07-30
公開日2019-08-28
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.19 Å)
主引用文献Design of selective PI3K delta inhibitors using an iterative scaffold-hopping workflow.
Bioorg.Med.Chem.Lett., 29, 2019
6Q1I
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GH5-4 broad specificity endoglucanase from Clostrdium longisporum
分子名称: Endoglucanase A
著者Bianchetti, C.M, Bingman, C.A, Fox, B.G.
登録日2019-08-04
公開日2020-08-05
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.35 Å)
主引用文献A structural and kinetic survey of GH5_4 endoglucanases reveals determinants of broad substrate specificity and opportunities for biomass hydrolysis.
J.Biol.Chem., 295, 2020
4L7I
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Crystal structure of S-Adenosylmethionine synthase from Sulfolobus solfataricus complexed with SAM and PPi
分子名称: DIPHOSPHATE, MAGNESIUM ION, PHOSPHATE ION, ...
著者Wang, F, Hurley, K.A, Helmich, K.E, Singh, S, Bingman, C.A, Thorson, J.S, Phillips Jr, G.N, Enzyme Discovery for Natural Product Biosynthesis (NatPro)
登録日2013-06-13
公開日2013-07-03
最終更新日2023-12-06
実験手法X-RAY DIFFRACTION (2.189 Å)
主引用文献Understanding molecular recognition of promiscuity of thermophilic methionine adenosyltransferase sMAT from Sulfolobus solfataricus.
Febs J., 281, 2014
2F2G
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X-Ray Structure of Gene Product From Arabidopsis Thaliana AT3G16990
分子名称: 4-AMINO-5-HYDROXYMETHYL-2-METHYLPYRIMIDINE, SEED MATURATION PROTEIN PM36 HOMOLOG, SULFATE ION
著者Wesenberg, G.W, Smith, D.W, Phillips Jr, G.N, Johnson, K.A, Bitto, E, Bingman, C.A, Center for Eukaryotic Structural Genomics (CESG)
登録日2005-11-16
公開日2005-12-13
最終更新日2017-10-18
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Crystal structure of gene locus At3g16990 from Arabidopsis thaliana
Proteins, 57, 2004
6Q2S
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Cryo-EM structure of RET/GFRa3/ARTN extracellular complex. The 3D refinement was applied with C2 symmetry.
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, GDNF family receptor alpha-3, ...
著者Li, J, Shang, G.J, Chen, Y.J, Brautigam, C.A, Liou, J, Zhang, X.W, Bai, X.C.
登録日2019-08-08
公開日2019-10-02
最終更新日2020-07-29
実験手法ELECTRON MICROSCOPY (3.8 Å)
主引用文献Cryo-EM analyses reveal the common mechanism and diversification in the activation of RET by different ligands.
Elife, 8, 2019
4ITC
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BU of 4itc by Molmil
Crystal Structure Analysis of the K1 Cleaved Adhesin domain of Lys-gingipain (Kgp) from Porphyromonas gingivalis W83
分子名称: CALCIUM ION, GLYCEROL, GUANIDINE, ...
著者Ganuelas, L.A, Li, N, Hunter, N, Collyer, C.A.
登録日2013-01-18
公開日2013-09-25
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献The lysine gingipain adhesin domains from Porphyromonas gingivalis interact with erythrocytes and albumin: Structures correlate to function.
Eur J Microbiol Immunol (Bp), 3, 2013
1CPT
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BU of 1cpt by Molmil
CRYSTAL STRUCTURE AND REFINEMENT OF CYTOCHROME P450-TERP AT 2.3 ANGSTROMS RESOLUTION
分子名称: CYTOCHROME P450-TERP, PROTOPORPHYRIN IX CONTAINING FE
著者Hasemann, C.A, Ravichandran, K.G, Peterson, J.A, Deisenhofer, J.
登録日1993-11-23
公開日1994-01-31
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Crystal structure and refinement of cytochrome P450terp at 2.3 A resolution.
J.Mol.Biol., 236, 1994
1JBV
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BU of 1jbv by Molmil
FPGS-AMPPCP complex
分子名称: FOLYLPOLYGLUTAMATE SYNTHASE, MAGNESIUM ION, PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER
著者Sun, X, Cross, J.A, Bognar, A.L, Baker, E.N, Smith, C.A.
登録日2001-06-06
公開日2001-09-19
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Folate-binding triggers the activation of folylpolyglutamate synthetase.
J.Mol.Biol., 310, 2001
2F8K
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Sequence specific recognition of RNA hairpins by the SAM domain of Vts1
分子名称: 5'-R(*UP*AP*AP*UP*CP*UP*UP*UP*GP*AP*CP*AP*GP*AP*UP*U)-3', Protein VTS1
著者Aviv, T, Lin, Z, Ben-Ari, G, Smibert, C.A, Sicheri, F.
登録日2005-12-02
公開日2006-01-24
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Sequence-specific recognition of RNA hairpins by the SAM domain of Vts1p.
Nat.Struct.Mol.Biol., 13, 2006
1JIL
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BU of 1jil by Molmil
Crystal structure of S. aureus TyrRS in complex with SB284485
分子名称: [2-AMINO-3-(4-HYDROXY-PHENYL)-PROPIONYLAMINO]- (3,4,5-TRIHYDROXY-6-METHYL-TETRAHYDRO-PYRAN-2-YL)- ACETIC ACID, tyrosyl-tRNA synthetase
著者Qiu, X, Janson, C.A, Smith, W.W, Jarvest, R.L.
登録日2001-07-02
公開日2001-10-26
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Crystal structure of Staphylococcus aureus tyrosyl-tRNA synthetase in complex with a class of potent and specific inhibitors.
Protein Sci., 10, 2001
7ZLV
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Tail tip of siphophage T5 : central fibre protein pb4
分子名称: Probable central straight fiber
著者Linares, R, Arnaud, C.A, Effantin, G, Epalle, N, Boeri Erba, E, Schoehn, G, Breyton, C.
登録日2022-04-15
公開日2023-02-08
最終更新日2024-07-24
実験手法ELECTRON MICROSCOPY (4.22 Å)
主引用文献Structural basis of bacteriophage T5 infection trigger and E. coli cell wall perforation.
Sci Adv, 9, 2023
4ISZ
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RNA ligase RtcB in complex with GTP alphaS and Mn(II)
分子名称: GUANOSINE-5'-RP-ALPHA-THIO-TRIPHOSPHATE, MANGANESE (II) ION, SULFATE ION, ...
著者Desai, K.K, Bingman, C.A, Phillips Jr, G.N, Raines, R.T.
登録日2013-01-17
公開日2013-04-10
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.303 Å)
主引用文献Structures of the Noncanonical RNA Ligase RtcB Reveal the Mechanism of Histidine Guanylylation.
Biochemistry, 52, 2013
6PZ7
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GH5-4 broad specificity endoglucanase from Clostridium acetobutylicum
分子名称: 1,2-ETHANEDIOL, CHLORIDE ION, Endoglucanase family 5
著者Bianchetti, C.M, Bingman, C.A, Fox, B.G.
登録日2019-07-31
公開日2020-08-05
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.25 Å)
主引用文献A structural and kinetic survey of GH5_4 endoglucanases reveals determinants of broad substrate specificity and opportunities for biomass hydrolysis.
J.Biol.Chem., 295, 2020
4GIP
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Structure of the cleavage-activated prefusion form of the parainfluenza virus 5 (PIV5) fusion protein
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Fusion glycoprotein F1, Fusion glycoprotein F2
著者Welch, B.D, Liu, Y, Kors, C.A, Leser, G.P, Jardetzky, T.S, Lamb, R.A.
登録日2012-08-08
公開日2012-09-19
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structure of the cleavage-activated prefusion form of the parainfluenza virus 5 fusion protein.
Proc.Natl.Acad.Sci.USA, 109, 2012
6Q2O
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Cryo-EM structure of RET/GFRa2/NRTN extracellular complex. The 3D refinement was applied with C2 symmetry.
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, GDNF family receptor alpha-2, ...
著者Li, J, Shang, G.J, Chen, Y.J, Brautigam, C.A, Liou, J, Zhang, X.W, Bai, X.C.
登録日2019-08-08
公開日2019-10-02
最終更新日2020-07-29
実験手法ELECTRON MICROSCOPY (3.65 Å)
主引用文献Cryo-EM analyses reveal the common mechanism and diversification in the activation of RET by different ligands.
Elife, 8, 2019
2EZM
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SOLUTION NMR STRUCTURE OF CYANOVIRIN-N, RESTRAINED REGULARIZED MEAN COORDINATES
分子名称: CYANOVIRIN-N
著者Bewley, C.A, Gronenborn, A.M, Clore, G.M.
登録日1998-05-06
公開日1999-05-11
最終更新日2022-03-09
実験手法SOLUTION NMR
主引用文献Solution structure of cyanovirin-N, a potent HIV-inactivating protein.
Nat.Struct.Biol., 5, 1998
4MZ4
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Discovery of an Irreversible HCV NS5B Polymerase Inhibitor
分子名称: 1-[(2-chloroquinolin-3-yl)methyl]-6-fluoro-5-methyl-3-(2-oxo-1,2-dihydropyridin-3-yl)-1H-indole-2-carboxylic acid, PHOSPHATE ION, RNA-directed RNA polymerase
著者Zeng, Q, Anilkumar, G.N, Rosenblum, S.B, Huang, H.-C, Lesburg, C.A, Jiang, Y, Selyutin, O, Chan, T.-Y, Bennett, F, Chen, K.X, Venkatraman, S, Sannigrahi, M, Velazquez, F, Duca, J.S, Gavalas, S, Huang, Y, Pu, H, Wang, L, Pinto, P, Vibulbhan, B, Agrawal, S, Ferrari, E, Jiang, C.-K, Li, C, Hesk, D, Gesell, J, Sorota, S, Shih, N.-Y, Njoroge, F.G, Kozlowski, J.A.
登録日2013-09-29
公開日2013-12-11
最終更新日2013-12-18
実験手法X-RAY DIFFRACTION (1.63 Å)
主引用文献Discovery of an irreversible HCV NS5B polymerase inhibitor.
Bioorg.Med.Chem.Lett., 23, 2013

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