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PDB: 323 results

3ZOP
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BU of 3zop by Molmil
Arg90Cit chorismate mutase of Bacillus subtilis at 1.6 A resolution
Descriptor: CHORISMATE MUTASE AROH
Authors:Burschowsky, D, vanEerde, A, Okvist, M, Kienhofer, A, Kast, P, Hilvert, D, Krengel, U.
Deposit date:2013-02-22
Release date:2014-04-16
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (1.61 Å)
Cite:Electrostatic Transition State Stabilization Rather Than Reactant Destabilization Provides the Chemical Basis for Efficient Chorismate Mutase Catalysis.
Proc.Natl.Acad.Sci.USA, 111, 2014
3ZP4
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BU of 3zp4 by Molmil
Arg90Cit chorismate mutase of Bacillus subtilis in complex with a transition state analog
Descriptor: 8-HYDROXY-2-OXA-BICYCLO[3.3.1]NON-6-ENE-3,5-DICARBOXYLIC ACID, CHORISMATE MUTASE AROH
Authors:Burschowsky, D, vanEerde, A, Okvist, M, Kienhofer, A, Kast, P, Hilvert, D, Krengel, U.
Deposit date:2013-02-26
Release date:2014-04-16
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.798 Å)
Cite:Electrostatic Transition State Stabilization Rather Than Reactant Destabilization Provides the Chemical Basis for Efficient Chorismate Mutase Catalysis.
Proc.Natl.Acad.Sci.USA, 111, 2014
3ZP7
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BU of 3zp7 by Molmil
Arg90Cit chorismate mutase of Bacillus subtilis in complex with chorismate and prephenate
Descriptor: (3R,4R)-3-[(1-carboxyethenyl)oxy]-4-hydroxycyclohexa-1,5-diene-1-carboxylic acid, CHORISMATE MUTASE AROH, PREPHENIC ACID
Authors:Burschowsky, D, vanEerde, A, Okvist, M, Kienhofer, A, Kast, P, Hilvert, D, Krengel, U.
Deposit date:2013-02-26
Release date:2014-04-16
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.698 Å)
Cite:Electrostatic Transition State Stabilization Rather Than Reactant Destabilization Provides the Chemical Basis for Efficient Chorismate Mutase Catalysis.
Proc.Natl.Acad.Sci.USA, 111, 2014
1HRM
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BU of 1hrm by Molmil
THE PROXIMAL LIGAND VARIANT HIS93TYR OF HORSE HEART MYOGLOBIN
Descriptor: MYOGLOBIN, PROTOPORPHYRIN IX CONTAINING FE, SULFATE ION
Authors:Burk, D.L, Brayer, G.D.
Deposit date:1994-09-21
Release date:1995-01-26
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:The proximal ligand variant His93Tyr of horse heart myoglobin.
Biochemistry, 34, 1995
8ASJ
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BU of 8asj by Molmil
Four subunit cytochrome b-c1 complex from Rhodobacter sphaeroides in native nanodiscs - focussed refinement in the b-c conformation
Descriptor: 1,2-dioleoyl-sn-glycero-3-phosphoethanolamine, Cytochrome b, Cytochrome b-c1 subunit IV, ...
Authors:Swainsbury, D.J.K, Hawkings, F.R, Martin, E.C, Musial, S, Salisbury, J.H, Jackson, P.J, Farmer, D.A, Johnson, M.P, Siebert, C.A, Hitchcock, A, Hunter, C.N.
Deposit date:2022-08-19
Release date:2023-03-15
Last modified:2023-03-22
Method:ELECTRON MICROSCOPY (3.75 Å)
Cite:Cryo-EM structure of the four-subunit Rhodobacter sphaeroides cytochrome bc 1 complex in styrene maleic acid nanodiscs.
Proc.Natl.Acad.Sci.USA, 120, 2023
8ASI
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BU of 8asi by Molmil
Four subunit cytochrome b-c1 complex from Rhodobacter sphaeroides in native nanodiscs - consensus refinement in the b-b conformation
Descriptor: 1,2-dioleoyl-sn-glycero-3-phosphoethanolamine, Cytochrome b, Cytochrome b-c1 subunit IV, ...
Authors:Swainsbury, D.J.K, Hawkings, F.R, Martin, E.C, Musial, S, Salisbury, J.H, Jackson, P.J, Farmer, D.A, Johnson, M.P, Siebert, C.A, Hitchcock, A, Hunter, C.N.
Deposit date:2022-08-19
Release date:2023-03-15
Last modified:2023-03-22
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:Cryo-EM structure of the four-subunit Rhodobacter sphaeroides cytochrome bc 1 complex in styrene maleic acid nanodiscs.
Proc.Natl.Acad.Sci.USA, 120, 2023
5UTG
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BU of 5utg by Molmil
Red abalone lysin F104A
Descriptor: Egg-lysin
Authors:Wilburn, D.B, Tuttle, L.M.
Deposit date:2017-02-14
Release date:2018-01-31
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Solution structure of sperm lysin yields novel insights into molecular dynamics of rapid protein evolution.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
5QU1
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BU of 5qu1 by Molmil
Crystal Structure of the monomeric human Nck SH3.1 domain, triclinic, 1.08A
Descriptor: Cytoplasmic protein NCK1, SULFATE ION
Authors:Burger, D, Ruf, A, Benz, J, Schlatter, D, Rudolph, M.G.
Deposit date:2019-12-13
Release date:2020-02-12
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.08 Å)
Cite:Small molecule AX-024 reduces T cell proliferation independently of CD3ε/Nck1 interaction, which is governed by a domain swap in the Nck1-SH3.1 domain.
J.Biol.Chem., 295, 2020
5QU5
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BU of 5qu5 by Molmil
Domain Swap in the first SH3 domain of human Nck1
Descriptor: Cytoplasmic protein NCK1
Authors:Burger, D, Ruf, A, Benz, J, Schlatter, D, Rudolph, M.G.
Deposit date:2019-12-13
Release date:2020-02-12
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.11 Å)
Cite:Small molecule AX-024 reduces T cell proliferation independently of CD3ε/Nck1 interaction, which is governed by a domain swap in the Nck1-SH3.1 domain.
J.Biol.Chem., 295, 2020
3FC6
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BU of 3fc6 by Molmil
hRXRalpha & mLXRalpha with an indole Pharmacophore, SB786875
Descriptor: Nr1h3 protein, RETINOIC ACID, Retinoic acid receptor RXR-alpha, ...
Authors:Washburn, D.G, Hoang, T.H, Campobasso, N, Smallwood, A, Parks, D.J, Webb, C.L, Frank, K, Nord, M, Duraiswami, C, Evans, C, Jaye, M, Thompson, S.K.
Deposit date:2008-11-21
Release date:2009-02-10
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.063 Å)
Cite:Synthesis and SAR of potent LXR agonists containing an indole pharmacophore.
Bioorg.Med.Chem.Lett., 19, 2009
1AWO
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BU of 1awo by Molmil
THE SOLUTION NMR STRUCTURE OF ABL SH3 AND ITS RELATIONSHIP TO SH2 IN THE SH(32) CONSTRUCT, 20 STRUCTURES
Descriptor: ABL TYROSINE KINASE
Authors:Cowburn, D.
Deposit date:1997-10-03
Release date:1998-01-28
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:The solution structure of Abl SH3, and its relationship to SH2 in the SH(32) construct.
Structure, 3, 1995
1J7I
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BU of 1j7i by Molmil
Crystal Structure of 3',5"-Aminoglycoside Phosphotransferase Type IIIa Apoenzyme
Descriptor: AMINOGLYCOSIDE 3'-PHOSPHOTRANSFERASE
Authors:Burk, D.L, Hon, W.C, Leung, A.K.-W, Berghuis, A.M.
Deposit date:2001-05-16
Release date:2001-08-08
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Structural analyses of nucleotide binding to an aminoglycoside phosphotransferase.
Biochemistry, 40, 2001
2MHY
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BU of 2mhy by Molmil
Structure determination of the salamander courtship pheromone Plethodontid Modulating Factor
Descriptor: Plethodontid modulating factor
Authors:Wilburn, D.B, Bowen, K.E, Doty, K.A, Arumugam, S, Lane, A.N, Feldhoff, P.W, Feldhoff, R.C.
Deposit date:2013-12-05
Release date:2014-01-01
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Structural insights into the evolution of a sexy protein: novel topology and restricted backbone flexibility in a hypervariable pheromone from the red-legged salamander, Plethodon shermani.
Plos One, 9, 2014
5HUB
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BU of 5hub by Molmil
High-resolution structure of chorismate mutase from Corynebacterium glutamicum
Descriptor: Chorismate mutase, FORMIC ACID
Authors:Burschowsky, D, Heim, J.B, Thorbjoernsrud, H.V, Krengel, U.
Deposit date:2016-01-27
Release date:2017-08-02
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.06 Å)
Cite:Inter-Enzyme Allosteric Regulation of Chorismate Mutase in Corynebacterium glutamicum: Structural Basis of Feedback Activation by Trp.
Biochemistry, 57, 2018
2KWU
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BU of 2kwu by Molmil
Solution Structure of UBM2 of murine Polymerase iota in Complex with Ubiquitin
Descriptor: DNA polymerase iota, Ubiquitin
Authors:Burschowsky, D, Rudolf, F, Rabut, G, Herrmann, T, Peter, M, Wider, G.
Deposit date:2010-04-19
Release date:2010-10-06
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Structural analysis of the conserved ubiquitin-binding motifs (UBMs) of the translesion polymerase iota in complex with ubiquitin.
J.Biol.Chem., 286, 2011
2KWV
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BU of 2kwv by Molmil
Solution Structure of UBM1 of murine Polymerase iota in Complex with Ubiquitin
Descriptor: DNA polymerase iota, Ubiquitin
Authors:Burschowsky, D, Rudolf, F, Rabut, G, Herrmann, T, Peter, M, Wider, G.
Deposit date:2010-04-20
Release date:2010-10-06
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Structural analysis of the conserved ubiquitin-binding motifs (UBMs) of the translesion polymerase iota in complex with ubiquitin.
J.Biol.Chem., 286, 2011
1J7U
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BU of 1j7u by Molmil
Crystal Structure of 3',5"-Aminoglycoside Phosphotransferase Type IIIa AMPPNP Complex
Descriptor: AMINOGLYCOSIDE 3'-PHOSPHOTRANSFERASE, MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER
Authors:Burk, D.L, Hon, W.C, Leung, A.K.-W, Berghuis, A.M.
Deposit date:2001-05-18
Release date:2001-08-08
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structural analyses of nucleotide binding to an aminoglycoside phosphotransferase.
Biochemistry, 40, 2001
1J7L
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BU of 1j7l by Molmil
Crystal Structure of 3',5"-Aminoglycoside Phosphotransferase Type IIIa ADP Complex
Descriptor: ADENOSINE-5'-DIPHOSPHATE, AMINOGLYCOSIDE 3'-PHOSPHOTRANSFERASE, MAGNESIUM ION
Authors:Burk, D.L, Hon, W.C, Leung, A.K.-W, Berghuis, A.M.
Deposit date:2001-05-17
Release date:2001-08-08
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structural analyses of nucleotide binding to an aminoglycoside phosphotransferase.
Biochemistry, 40, 2001
4TR6
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BU of 4tr6 by Molmil
Crystal structure of DNA polymerase sliding clamp from Bacillus subtilis
Descriptor: DNA polymerase III subunit beta, SODIUM ION
Authors:Burnouf, D, Olieric, V, Ennifar, E, Wolff, P.
Deposit date:2014-06-14
Release date:2014-09-10
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Differential Modes of Peptide Binding onto Replicative Sliding Clamps from Various Bacterial Origins.
J.Med.Chem., 57, 2014
5HUC
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BU of 5huc by Molmil
DAHP synthase from Corynebacterium glutamicum
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, 3-Deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase, MANGANESE (II) ION, ...
Authors:Burschowsky, D, Heim, J.B, Thorbjoernsrud, H.V, Krengel, U.
Deposit date:2016-01-27
Release date:2017-08-02
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:Inter-Enzyme Allosteric Regulation of Chorismate Mutase in Corynebacterium glutamicum: Structural Basis of Feedback Activation by Trp.
Biochemistry, 57, 2018
5HUE
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BU of 5hue by Molmil
DAHP synthase from Corynebacterium glutamicum in complex with tryptophan
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 3-Deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase, ...
Authors:Burschowsky, D, Heim, J.B, Thorbjoernsrud, H.V, Krengel, U.
Deposit date:2016-01-27
Release date:2017-08-02
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:Inter-Enzyme Allosteric Regulation of Chorismate Mutase in Corynebacterium glutamicum: Structural Basis of Feedback Activation by Trp.
Biochemistry, 57, 2018
3ZO8
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BU of 3zo8 by Molmil
Wild-type chorismate mutase of Bacillus subtilis at 1.6 A resolution
Descriptor: CHORISMATE MUTASE AROH
Authors:Burschowsky, D, vanEerde, A, Okvist, M, Kienhofer, A, Kast, P, Hilvert, D, Krengel, U.
Deposit date:2013-02-20
Release date:2014-04-16
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.59 Å)
Cite:Electrostatic Transition State Stabilization Rather Than Reactant Destabilization Provides the Chemical Basis for Efficient Chorismate Mutase Catalysis.
Proc.Natl.Acad.Sci.USA, 111, 2014
6AZ5
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BU of 6az5 by Molmil
Crystal structure of CBMd (family CBM41) from Eubacterium rectale Amy13K
Descriptor: alpha-amylase
Authors:Cockburn, D.W, Wawrzak, Z, Suh, C, Koropatkin, N.M.
Deposit date:2017-09-10
Release date:2017-11-29
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Novel carbohydrate binding modules in the surface anchored alpha-amylase of Eubacterium rectale provide a molecular rationale for the range of starches used by this organism in the human gut.
Mol. Microbiol., 107, 2018
4UF2
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BU of 4uf2 by Molmil
Deerpox virus DPV022 in complex with Bax BH3
Descriptor: Antiapoptotic membrane protein, Apoptosis regulator BAX
Authors:Burton, D.R, Kvansakul, M.
Deposit date:2014-12-23
Release date:2015-08-05
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (3 Å)
Cite:Structural Basis of Deerpox Virus-Mediated Inhibition of Apoptosis.
Acta Crystallogr.,Sect.D, 71, 2015
4UF3
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BU of 4uf3 by Molmil
Deerpox virus DPV022 in complex with Bim BH3
Descriptor: Antiapoptotic membrane protein, Bcl-2-like protein 11
Authors:Burton, D.R, Kvansakul, M.
Deposit date:2014-12-23
Release date:2015-08-05
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structural Basis of Deerpox Virus-Mediated Inhibition of Apoptosis.
Acta Crystallogr.,Sect.D, 71, 2015

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數據於2024-10-30公開中

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