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PDB: 175 results

2BJB
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BU of 2bjb by Molmil
Mycobacterium Tuberculosis Epsp Synthase In Unliganded State
Descriptor: 3-PHOSPHOSHIKIMATE 1-CARBOXYVINYLTRANSFERASE, ACETATE ION, SODIUM ION
Authors:Bourenkov, G.P, Kachalova, G.S, Strizhov, N, Bruning, M, Vagin, A, Bartunik, H.D.
Deposit date:2005-02-01
Release date:2006-03-09
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Mycobacterium Tuberculosis Epsp Synthase in Unliganded State
To be Published
3K7Q
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BU of 3k7q by Molmil
Crystal structure of substrate-bound 6-hydroxy-L-nicotine oxidase from Arthrobacter nicotinovorans
Descriptor: (1R)-2-{[(S)-(2-aminoethoxy)(hydroxy)phosphoryl]oxy}-1-[(pentadecanoyloxy)methyl]ethyl (12E)-hexadeca-9,12-dienoate, 5-[(2S)-1-methylpyrrolidin-2-yl]pyridin-2-ol, 6-hydroxy-L-nicotine oxidase, ...
Authors:Bourenkov, G.P, Kachalova, G.S, Bartunik, H.D.
Deposit date:2009-10-13
Release date:2010-01-19
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Crystal Structure Analysis of Free and Substrate-Bound 6-Hydroxy-l-Nicotine Oxidase from Arthrobacter nicotinovorans.
J.Mol.Biol., 396, 2010
3K7M
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Crystal structure of 6-hydroxy-L-nicotine oxidase from Arthrobacter nicotinovorans
Descriptor: (1R)-2-{[(S)-(2-aminoethoxy)(hydroxy)phosphoryl]oxy}-1-[(pentadecanoyloxy)methyl]ethyl (12E)-hexadeca-9,12-dienoate, 6-hydroxy-L-nicotine oxidase, FLAVIN-ADENINE DINUCLEOTIDE
Authors:Bourenkov, G.P, Kachalova, G.S, Bartunik, H.D.
Deposit date:2009-10-13
Release date:2010-01-19
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Crystal Structure Analysis of Free and Substrate-Bound 6-Hydroxy-l-Nicotine Oxidase from Arthrobacter nicotinovorans.
J.Mol.Biol., 396, 2010
3K7T
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BU of 3k7t by Molmil
Crystal structure of apo-form 6-hydroxy-L-nicotine oxidase, crystal form P3121
Descriptor: (1R)-2-{[(S)-(2-aminoethoxy)(hydroxy)phosphoryl]oxy}-1-[(pentadecanoyloxy)methyl]ethyl (12E)-hexadeca-9,12-dienoate, 6-hydroxy-L-nicotine oxidase, FLAVIN-ADENINE DINUCLEOTIDE
Authors:Bourenkov, G.P, Kachalova, G.S, Bartunik, H.D.
Deposit date:2009-10-13
Release date:2010-01-19
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.85 Å)
Cite:Crystal Structure Analysis of Free and Substrate-Bound 6-Hydroxy-l-Nicotine Oxidase from Arthrobacter nicotinovorans.
J.Mol.Biol., 396, 2010
6SUM
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BU of 6sum by Molmil
Amicoumacin kinase hAmiN in complex with AMP-PNP, MG2+ and Ami
Descriptor: ACETATE ION, AMICOUMACIN KINASE, Amicoumacin A, ...
Authors:Bourenkov, G.P, Mokrushina, Y.A, Terekhov, S.S, Smirnov, I.V, Gabibov, A.G, Altman, S.
Deposit date:2019-09-16
Release date:2020-07-22
Last modified:2024-05-15
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:A kinase bioscavenger provides antibiotic resistance by extremely tight substrate binding.
Sci Adv, 6, 2020
6SUL
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BU of 6sul by Molmil
Amicoumacin kinase AmiN in complex with AMP-PNP, Mg2+ and Ami
Descriptor: Amicoumacin A, CHLORIDE ION, MAGNESIUM ION, ...
Authors:Bourenkov, G.P, Mokrushina, Y.A, Terekhov, S.S, Smirnov, I.V, Gabibov, A.G, Altman, S.
Deposit date:2019-09-15
Release date:2020-07-22
Last modified:2024-05-15
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:A kinase bioscavenger provides antibiotic resistance by extremely tight substrate binding.
Sci Adv, 6, 2020
6SUN
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BU of 6sun by Molmil
Amicoumacin kinase hAmiN in complex with AMP-PNP, Ca2+ and Ami
Descriptor: APH domain-containing protein, amicoumacin kinase, Amicoumacin A, ...
Authors:Bourenkov, G.P, Mokrushina, Y.A, Terekhov, S.S, Smirnov, I.V, Gabibov, A.G, Altman, S.
Deposit date:2019-09-16
Release date:2020-07-22
Last modified:2024-05-15
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:A kinase bioscavenger provides antibiotic resistance by extremely tight substrate binding.
Sci Adv, 6, 2020
6SV5
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BU of 6sv5 by Molmil
Amicoumacin kinase AmiN in complex with ATP
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, Phosphotransferase enzyme family protein, amicoumacin kinase
Authors:Bourenkov, G.P, Mokrushina, Y.A, Terekhov, S.S, Smirnov, I.V, Gabibov, A.G, Altman, S.
Deposit date:2019-09-17
Release date:2020-07-22
Last modified:2024-05-15
Method:X-RAY DIFFRACTION (2 Å)
Cite:A kinase bioscavenger provides antibiotic resistance by extremely tight substrate binding.
Sci Adv, 6, 2020
6SUI
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BU of 6sui by Molmil
AMICOUMACIN KINASE AMIN
Descriptor: PENTAETHYLENE GLYCOL, Phosphotransferase enzyme family protein
Authors:Bourenkov, G.P, Mokrushina, Y.A, Terekhov, S.S, Smirnov, I.V, Gabibov, A.G, Altman, S.
Deposit date:2019-09-14
Release date:2020-07-22
Last modified:2024-05-15
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:A kinase bioscavenger provides antibiotic resistance by extremely tight substrate binding.
Sci Adv, 6, 2020
2JA2
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BU of 2ja2 by Molmil
Mycobacterium tuberculosis glutamyl-tRNA synthetase
Descriptor: ACETATE ION, CHLORIDE ION, GLUTAMYL-TRNA SYNTHETASE
Authors:Bourenkov, G.P, Strizhov, N, Shkolnaya, L.A, Bruning, M, Bartunik, H.D.
Deposit date:2006-11-20
Release date:2008-10-28
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Structural Basis for Discriminating or Non-Discriminating Functioning of Glutamyl-tRNA Synthetases
To be Published
4UWM
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BU of 4uwm by Molmil
Type II Baeyer-Villiger monooxygenase.The oxygenating constituent of 3,6-diketocamphane monooxygenase from CAM plasmid of Pseudomonas putida in complex with FMN.
Descriptor: 3,6-DIKETOCAMPHANE 1,6 MONOOXYGENASE, DI(HYDROXYETHYL)ETHER, FLAVIN MONONUCLEOTIDE, ...
Authors:Isupov, M.N, Schroeder, E, Gibson, R.P, Beecher, J, Donadio, G, Saneei, V, Dcunha, S, McGhie, E.J, Sayer, C, Davenport, C.F, Lau, P.C, Hasegawa, Y, Iwaki, H, Kadow, M, Loschinski, K, Bornscheuer, U.T, Bourenkov, G, Littlechild, J.A.
Deposit date:2014-08-12
Release date:2015-08-26
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:The Oxygenating Constituent of 3,6-Diketocamphane Monooxygenase from the Cam Plasmid of Pseudomonas Putida: The First Crystal Structure of a Type II Baeyer-Villiger Monooxygenase.
Acta Crystallogr.,Sect.D, 71, 2015
1SU3
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BU of 1su3 by Molmil
X-ray structure of human proMMP-1: New insights into collagenase action
Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, CALCIUM ION, CHLORIDE ION, ...
Authors:Jozic, D, Bourenkov, G, Lim, N.H, Nagase, H, Bode, W, Maskos, K, Structural Proteomics in Europe (SPINE)
Deposit date:2004-03-26
Release date:2004-12-21
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:X-ray structure of human proMMP-1: new insights into procollagenase activation and collagen binding.
J.Biol.Chem., 280, 2005
6FVH
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BU of 6fvh by Molmil
Macrophage Migration Inhibitory Factor (MIF) with Covalently Bound PITC
Descriptor: Macrophage migration inhibitory factor, N-phenylthioformamide, SULFATE ION
Authors:Samygina, V.R, Bourenkov, G, Sokolov, A.V.
Deposit date:2018-03-02
Release date:2018-06-06
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Structural Study of the Complex Formed by Ceruloplasmin and Macrophage Migration Inhibitory Factor.
Biochemistry Mosc., 83, 2018
4DP1
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BU of 4dp1 by Molmil
The 1.35 Angstrom crystal structure of reduced (CuI) poplar plastocyanin B at pH 4.0
Descriptor: ACETATE ION, COPPER (I) ION, GLYCEROL, ...
Authors:Kachalova, G.S, Shosheva, A.H, Bourenkov, G.P, Donchev, A.A, Dimitrov, M.I, Bartunik, H.D.
Deposit date:2012-02-13
Release date:2013-02-13
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:Structural comparison of the poplar plastocyanin isoforms PCa and PCb sheds new light on the role of the copper site geometry in interactions with redox partners in oxygenic photosynthesis.
J.Inorg.Biochem., 115, 2012
4DP7
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BU of 4dp7 by Molmil
The 1.08 Angstrom crystal structure of oxidized (CuII) poplar plastocyanin A at pH 4.0
Descriptor: COPPER (II) ION, Plastocyanin A, chloroplastic, ...
Authors:Kachalova, G.S, Shosheva, A.H, Bourenkov, G.P, Donchev, A.A, Dimitrov, M.I, Bartunik, H.D.
Deposit date:2012-02-13
Release date:2013-02-13
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.08 Å)
Cite:Structural comparison of the poplar plastocyanin isoforms PCa and PCb sheds new light on the role of the copper site geometry in interactions with redox partners in oxygenic photosynthesis.
J.Inorg.Biochem., 115, 2012
4DP4
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BU of 4dp4 by Molmil
The 1.54 Angstrom crystal structure of reduced (CuI) poplar plastocyanin B at pH 6.0
Descriptor: COPPER (I) ION, GLYCEROL, Plastocyanin B, ...
Authors:Kachalova, G.S, Shosheva, A.H, Bourenkov, G.P, Donchev, A.A, Dimitrov, M.I, Bartunik, H.D.
Deposit date:2012-02-13
Release date:2013-02-13
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.54 Å)
Cite:Structural comparison of the poplar plastocyanin isoforms PCa and PCb sheds new light on the role of the copper site geometry in interactions with redox partners in oxygenic photosynthesis.
J.Inorg.Biochem., 115, 2012
4DP6
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BU of 4dp6 by Molmil
The 1.67 Angstrom crystal structure of reduced (CuI) poplar plastocyanin B at pH 8.0
Descriptor: COPPER (I) ION, GLYCEROL, Plastocyanin B, ...
Authors:Kachalova, G.S, Shosheva, A.H, Bourenkov, G.P, Donchev, A.A, Dimitrov, M.I, Bartunik, H.D.
Deposit date:2012-02-13
Release date:2013-02-13
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.67 Å)
Cite:Structural comparison of the poplar plastocyanin isoforms PCa and PCb sheds new light on the role of the copper site geometry in interactions with redox partners in oxygenic photosynthesis.
J.Inorg.Biochem., 115, 2012
2ZO5
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BU of 2zo5 by Molmil
Structure of the Thioalkalivibrio nitratireducens cytochrome c nitrite reductase in a complex with azide
Descriptor: 1-(2-METHOXY-ETHOXY)-2-{2-[2-(2-METHOXY-ETHOXY]-ETHOXY}-ETHANE, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, AZIDE ION, ...
Authors:Polyakov, K.M, Boyko, K.M, Slutsky, A, Tikhonova, T.V, Antipov, A.N, Zvyagilskaya, R.A, Popov, A.N, Lamzin, V.S, Bourenkov, G.P, Popov, V.O.
Deposit date:2008-05-05
Release date:2009-05-05
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:High-resolution structural analysis of a novel octaheme cytochrome c nitrite reductase from the haloalkaliphilic bacterium Thioalkalivibrio nitratireducens
J.Mol.Biol., 389, 2009
9IN8
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BU of 9in8 by Molmil
True-atomic resolution crystal structure of the open state of the viral channelrhodopsin OLPVR1
Descriptor: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, (2S)-2,3-dihydroxypropyl (9Z)-hexadec-9-enoate, EICOSANE, ...
Authors:Bukhdruker, S, Zabelskii, D, Astashkin, R, Bourenkov, G, Gordeliy, V.
Deposit date:2024-07-05
Release date:2025-03-12
Last modified:2025-04-23
Method:X-RAY DIFFRACTION (1.34 Å)
Cite:Ion-conducting and gating molecular mechanisms of channelrhodopsin revealed by true-atomic-resolution structures of open and closed states.
Nat.Struct.Mol.Biol., 2025
5LF0
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BU of 5lf0 by Molmil
Human 20S proteasome complex with Epoxomicin at 2.4 Angstrom
Descriptor: CHLORIDE ION, EPOXOMICIN (peptide inhibitor), MAGNESIUM ION, ...
Authors:Schrader, J, Henneberg, F, Mata, R, Tittmann, K, Schneider, T.R, Stark, H, Bourenkov, G, Chari, A.
Deposit date:2016-06-30
Release date:2016-08-17
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2.41 Å)
Cite:The inhibition mechanism of human 20S proteasomes enables next-generation inhibitor design.
Science, 353, 2016
5LF4
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BU of 5lf4 by Molmil
Human 20S proteasome complex with Delanzomib at 2.0 Angstrom
Descriptor: CHLORIDE ION, MAGNESIUM ION, PENTAETHYLENE GLYCOL, ...
Authors:Schrader, J, Henneberg, F, Mata, R, Tittmann, K, Schneider, T.R, Stark, H, Bourenkov, G, Chari, A.
Deposit date:2016-06-30
Release date:2016-08-17
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.99 Å)
Cite:The inhibition mechanism of human 20S proteasomes enables next-generation inhibitor design.
Science, 353, 2016
5LF6
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BU of 5lf6 by Molmil
Human 20S proteasome complex with Z-LLY-ketoaldehyde at 2.1 Angstrom
Descriptor: 1-ETHYL-PYRROLIDINE-2,5-DIONE, CHLORIDE ION, MAGNESIUM ION, ...
Authors:Schrader, J, Henneberg, F, Mata, R, Tittmann, K, Schneider, T.R, Stark, H, Bourenkov, G, Chari, A.
Deposit date:2016-06-30
Release date:2016-08-17
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (2.07 Å)
Cite:The inhibition mechanism of human 20S proteasomes enables next-generation inhibitor design.
Science, 353, 2016
5LEY
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BU of 5ley by Molmil
Human 20S proteasome complex with Oprozomib at 1.9 Angstrom
Descriptor: CHLORIDE ION, MAGNESIUM ION, PENTAETHYLENE GLYCOL, ...
Authors:Schrader, J, Henneberg, F, Mata, R, Tittmann, K, Schneider, T.R, Stark, H, Bourenkov, G, Chari, A.
Deposit date:2016-06-30
Release date:2016-08-17
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:The inhibition mechanism of human 20S proteasomes enables next-generation inhibitor design.
Science, 353, 2016
5LF7
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BU of 5lf7 by Molmil
Human 20S proteasome complex with Ixazomib at 2.0 Angstrom
Descriptor: CHLORIDE ION, MAGNESIUM ION, PENTAETHYLENE GLYCOL, ...
Authors:Schrader, J, Henneberg, F, Mata, R, Tittmann, K, Schneider, T.R, Stark, H, Bourenkov, G, Chari, A.
Deposit date:2016-06-30
Release date:2016-08-17
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2 Å)
Cite:The inhibition mechanism of human 20S proteasomes enables next-generation inhibitor design.
Science, 353, 2016
3SS9
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BU of 3ss9 by Molmil
Crystal structure of holo D-serine dehydratase from Escherichia coli at 1.97 A resolution
Descriptor: D-serine dehydratase, POTASSIUM ION, PYRIDOXAL-5'-PHOSPHATE
Authors:Urusova, D.V, Isupov, M.N, Antonyuk, S.V, Kachalova, G.S, Vagin, A.A, Lebedev, A.A, Bourenkov, G.P, Dauter, Z, Bartunik, H.D, Melik-Adamyan, W.R, Mueller, T.D, Schnackerz, K.D.
Deposit date:2011-07-08
Release date:2012-01-18
Last modified:2025-03-26
Method:X-RAY DIFFRACTION (1.97 Å)
Cite:Crystal structure of D-serine dehydratase from Escherichia coli.
Biochim.Biophys.Acta, 1824, 2011

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