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PDB: 331 results

6XT1
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The structure of the M60 catalytic domain from Clostridium perfringens ZmpC in complex the sialyl T antigen
Descriptor: 1,2-ETHANEDIOL, SERINE, ZINC ION, ...
Authors:Pluvinage, B, Boraston, A.B.
Deposit date:2020-07-16
Release date:2021-02-03
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.49 Å)
Cite:Molecular insights into architecturally complex glycopeptidases
Proc.Natl.Acad.Sci.USA, 2021
6ORH
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BU of 6orh by Molmil
Crystal structure of SpGH29
Descriptor: 1,2-ETHANEDIOL, Glycoside hydrolase, alpha-L-fucopyranose-(1-2)-beta-D-galactopyranose-(1-4)-[alpha-L-fucopyranose-(1-3)]2-acetamido-2-deoxy-alpha-D-glucopyranose
Authors:Pluvinage, B, Boraston, A.B.
Deposit date:2019-04-30
Release date:2019-07-10
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.62 Å)
Cite:Two complementary alpha-fucosidases fromStreptococcus pneumoniaepromote complete degradation of host-derived carbohydrate antigens.
J.Biol.Chem., 294, 2019
2OZN
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BU of 2ozn by Molmil
The Cohesin-Dockerin Complex of NagJ and NagH from Clostridium perfringens
Descriptor: CALCIUM ION, CHLORIDE ION, Hyalurononglucosaminidase, ...
Authors:Adams, J.J, Boraston, A, Smith, S.P.
Deposit date:2007-02-26
Release date:2008-05-06
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structural basis of Clostridium perfringens toxin complex formation.
Proc.Natl.Acad.Sci.Usa, 105, 2008
1OIF
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BU of 1oif by Molmil
Family 1 b-glucosidase from Thermotoga maritima
Descriptor: 5-HYDROXYMETHYL-3,4-DIHYDROXYPIPERIDINE, BETA-GLUCOSIDASE
Authors:Gloster, T, Zechel, D, Boraston, A.B, Boraston, C.M, Macdonald, J.M, Tilbrook, D.M, Stick, R.V, Davies, G.J.
Deposit date:2003-06-16
Release date:2003-11-25
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.12 Å)
Cite:Iminosugar Glycosidase Inhibitors: Structural and Thermodynamic Dissection of the Binding of Isofagomine and 1-Deoxynojirimycin to Beta-Glucosidases
J.Am.Chem.Soc., 125, 2003
1OIM
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Family 1 b-glucosidase from Thermotoga maritima
Descriptor: 1-DEOXYNOJIRIMYCIN, BETA-GLUCOSIDASE A
Authors:Gloster, T, Zechel, D.L, Boraston, A.B, Boraston, C.M, Macdonald, J.M, Tilbrook, D.M, Stick, R.V, Davies, G.J.
Deposit date:2003-06-19
Release date:2003-11-25
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Iminosugar Glycosidase Inhibitors: Structural and Thermodynamic Dissection of the Binding of Isofagomine and 1-Deoxynojirimycin to Beta-Glucosidases
J.Am.Chem.Soc., 125, 2003
1OIN
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BU of 1oin by Molmil
Family 1 b-glucosidase from Thermotoga maritima
Descriptor: 2-deoxy-2-fluoro-alpha-D-glucopyranose, BETA-GLUCOSIDASE A
Authors:Gloster, T, Zechel, D.L, Boraston, A.B, Boraston, C.M, Macdonald, J.M, Tilbrook, D.M, Stick, R.V, Davies, G.J.
Deposit date:2003-06-19
Release date:2003-11-25
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Iminosugar Glycosidase Inhibitors: Structural and Thermodynamic Dissection of the Binding of Isofagomine and 1-Deoxynojirimycin to Beta-Glucosidases
J.Am.Chem.Soc., 125, 2003
1OD0
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BU of 1od0 by Molmil
Family 1 b-glucosidase from Thermotoga maritima
Descriptor: BETA-GLUCOSIDASE A
Authors:Gloster, T, Zechel, D.L, Boraston, A.B, Boraston, C.M, Macdonald, J.M, Tilbrook, D.M, Stick, R.V, Davies, G.J.
Deposit date:2003-02-12
Release date:2003-03-06
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.11 Å)
Cite:Iminosugar Glycosidase Inhibitors: Structural and Thermodynamic Dissection of the Binding of Isofagomine and 1-Deoxynojirimycin to Beta-Glucosidases
J.Am.Chem.Soc., 125, 2003
2O4E
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BU of 2o4e by Molmil
The solution structure of a protein-protein interaction module from a family 84 glycoside hydrolase of Clostridium perfringens
Descriptor: O-GlcNAcase nagJ
Authors:Chitayat, S, Adams, J.J, Gregg, K, Boraston, A.B, Smith, S.P.
Deposit date:2006-12-04
Release date:2007-11-06
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Three-dimensional structure of a putative non-cellulosomal cohesin module from a Clostridium perfringens family 84 glycoside hydrolase.
J.Mol.Biol., 375, 2008
6BIA
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BU of 6bia by Molmil
Crystal structure of Ps i-CgsB
Descriptor: 1,2-ETHANEDIOL, CALCIUM ION, CITRIC ACID, ...
Authors:Hettle, A.G, Boraston, A.B.
Deposit date:2017-11-01
Release date:2018-03-14
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:The Molecular Basis of Polysaccharide Sulfatase Activity and a Nomenclature for Catalytic Subsites in this Class of Enzyme.
Structure, 26, 2018
6B1V
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BU of 6b1v by Molmil
Crystal structure of Ps i-CgsB C78S in complex with i-neocarratetraose
Descriptor: 1,2-ETHANEDIOL, 3,6-anhydro-2-O-sulfo-alpha-D-galactopyranose-(1-3)-4-O-sulfo-beta-D-galactopyranose-(1-4)-3,6-anhydro-2-O-sulfo-alpha-D-galactopyranose-(1-3)-4-O-sulfo-beta-D-galactopyranose, CALCIUM ION, ...
Authors:Hettle, A.G, Boraston, A.B.
Deposit date:2017-09-19
Release date:2018-03-14
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.84 Å)
Cite:The Molecular Basis of Polysaccharide Sulfatase Activity and a Nomenclature for Catalytic Subsites in this Class of Enzyme.
Structure, 26, 2018
6B0J
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BU of 6b0j by Molmil
Crystal structure of Ps i-CgsB in complex with k-i-k-neocarrahexaose
Descriptor: 1,2-ETHANEDIOL, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 3,6-anhydro-2-O-sulfo-alpha-D-galactopyranose-(1-3)-4-O-sulfo-beta-D-galactopyranose, ...
Authors:Hettle, A.G, Boraston, A.B.
Deposit date:2017-09-14
Release date:2018-03-14
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:The Molecular Basis of Polysaccharide Sulfatase Activity and a Nomenclature for Catalytic Subsites in this Class of Enzyme.
Structure, 26, 2018
6B0K
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BU of 6b0k by Molmil
Crystal structure of Ps i-CgsB C78S in complex with k-carrapentaose
Descriptor: 1,2-ETHANEDIOL, 3,6-anhydro-D-galactose, 4-O-sulfo-beta-D-galactopyranose, ...
Authors:Hettle, A, Boraston, A.B.
Deposit date:2017-09-14
Release date:2018-03-14
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:The Molecular Basis of Polysaccharide Sulfatase Activity and a Nomenclature for Catalytic Subsites in this Class of Enzyme.
Structure, 26, 2018
6DMS
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BU of 6dms by Molmil
Endo-fucoidan hydrolase MfFcnA4_H294Q from glycoside hydrolase family 107
Descriptor: 1,2-ETHANEDIOL, Alpha-1,4-endofucoidanase, CALCIUM ION
Authors:Vickers, C, Abe, K, Salama-Alber, O, Boraston, A.B.
Deposit date:2018-06-05
Release date:2018-10-03
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.85 Å)
Cite:Endo-fucoidan hydrolases from glycoside hydrolase family 107 (GH107) display structural and mechanistic similarities to alpha-l-fucosidases from GH29.
J. Biol. Chem., 293, 2018
8U5O
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BU of 8u5o by Molmil
The structure of the catalytic domain of NanI sialdase in complex with Neu5Gc
Descriptor: CALCIUM ION, Exo-alpha-sialidase, N-glycolyl-alpha-neuraminic acid, ...
Authors:Medley, B.J, Low, K.E, Garber, J.M, Gray, T.E, Liu, L, Klassen, L, Fordwour, O.B, Inglis, G.D, Boons, G.J, Zandberg, W.F, Abbott, W.D, Boraston, A.B.
Deposit date:2023-09-12
Release date:2024-09-04
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:A terminal case of glycan catabolism structural and enzymatic characterization of the sialidases of Clostridium perfringens
To Be Published
8U2A
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BU of 8u2a by Molmil
Crystal structure of NanI in complex with Neu5,9Ac
Descriptor: 1,2-ETHANEDIOL, 9-O-acetyl-5-acetamido-3,5-dideoxy-D-glycero-alpha-D-galacto-non-2-ulopyranosonic acid, Exo-alpha-sialidase, ...
Authors:Medley, B.J, Boraston, A.B.
Deposit date:2023-09-05
Release date:2024-09-04
Method:X-RAY DIFFRACTION (1.99 Å)
Cite:A terminal case of glycan catabolism: structural and enzymatic characterization of the sialidases of Clostridium perfringens
To Be Published
1J84
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BU of 1j84 by Molmil
STRUCTURE OF FAM17 CARBOHYDRATE BINDING MODULE FROM CLOSTRIDIUM CELLULOVORANS WITH BOUND CELLOTETRAOSE
Descriptor: CALCIUM ION, beta-D-glucopyranose-(1-4)-beta-D-glucopyranose-(1-4)-beta-D-glucopyranose-(1-4)-beta-D-glucopyranose, endo-1,4-beta glucanase EngF
Authors:Notenboom, V, Boraston, A.B, Chiu, P, Freelove, A.C.J, Kilburn, D.G, Rose, D.R.
Deposit date:2001-05-20
Release date:2001-12-12
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.02 Å)
Cite:Recognition of cello-oligosaccharides by a family 17 carbohydrate-binding module: an X-ray crystallographic, thermodynamic and mutagenic study.
J.Mol.Biol., 314, 2001
1KNM
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BU of 1knm by Molmil
Streptomyces lividans Xylan Binding Domain cbm13 in Complex with Lactose
Descriptor: ENDO-1,4-BETA-XYLANASE A, GLYCEROL, beta-D-galactopyranose-(1-4)-beta-D-glucopyranose
Authors:Notenboom, V, Boraston, A.B, Williams, S.J, Kilburn, D.G, Rose, D.R.
Deposit date:2001-12-19
Release date:2002-06-19
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:High-resolution crystal structures of the lectin-like xylan binding domain from Streptomyces lividans xylanase 10A with bound substrates reveal a novel mode of xylan binding.
Biochemistry, 41, 2002
1KNL
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BU of 1knl by Molmil
Streptomyces lividans Xylan Binding Domain cbm13
Descriptor: ENDO-1,4-BETA-XYLANASE A, GLYCEROL
Authors:Notenboom, V, Boraston, A.B, Williams, S.J, Kilburn, D.G, Rose, D.R.
Deposit date:2001-12-19
Release date:2002-06-19
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:High-resolution crystal structures of the lectin-like xylan binding domain from Streptomyces lividans xylanase 10A with bound substrates reveal a novel mode of xylan binding.
Biochemistry, 41, 2002
1J83
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BU of 1j83 by Molmil
STRUCTURE OF FAM17 CARBOHYDRATE BINDING MODULE FROM CLOSTRIDIUM CELLULOVORANS
Descriptor: CALCIUM ION, ENDO-1,4-BETA GLUCANASE ENGF
Authors:Notenboom, V, Boraston, A.B, Chiu, P, Freelove, A.C.J, Kilburn, D.G, Rose, D.R.
Deposit date:2001-05-20
Release date:2001-12-12
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Recognition of cello-oligosaccharides by a family 17 carbohydrate-binding module: an X-ray crystallographic, thermodynamic and mutagenic study.
J.Mol.Biol., 314, 2001
1MC9
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BU of 1mc9 by Molmil
STREPROMYCES LIVIDANS XYLAN BINDING DOMAIN CBM13 IN COMPLEX WITH XYLOPENTAOSE
Descriptor: ENDO-1,4-BETA-XYLANASE A, GLYCEROL, SULFATE ION, ...
Authors:Notenboom, V, Boraston, A.B, Williams, S.J, Kilburn, D.G, Rose, D.R.
Deposit date:2002-08-06
Release date:2002-09-11
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:High-resolution crystal structures of the lectin-like xylan binding domain from Streptomyces lividans xylanase 10A with bound substrates reveal a novel mode of xylan binding.
Biochemistry, 41, 2002
5FQE
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BU of 5fqe by Molmil
The details of glycolipid glycan hydrolysis by the structural analysis of a family 123 glycoside hydrolase from Clostridium perfringens
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, BETA-N-ACETYLGALACTOSAMINIDASE, BROMIDE ION, ...
Authors:Noach, I, Pluvinage, B, Laurie, C, Abe, K.T, Alteen, M, Vocadlo, D.J, Boraston, A.B.
Deposit date:2015-12-10
Release date:2016-03-30
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.53 Å)
Cite:The Details of Glycolipid Glycan Hydrolysis by the Structural Analysis of a Family 123 Glycoside Hydrolase from Clostridium Perfringens
J.Mol.Biol., 428, 2016
9C20
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BU of 9c20 by Molmil
The Sialidase NanJ in complex with Neu5,9Ac
Descriptor: 1,2-ETHANEDIOL, 9-O-acetyl-5-acetamido-3,5-dideoxy-D-glycero-alpha-D-galacto-non-2-ulopyranosonic acid, exo-alpha-sialidase
Authors:Medley, B.J, Low, K.E, Garber, J.M, Gray, T.E, Leeann, L.L, Fordwour, O.B, Inglis, G.D, Boons, G.J, Zandberg, W.F, Abbott, W, Boraston, A.
Deposit date:2024-05-30
Release date:2024-09-04
Method:X-RAY DIFFRACTION (2.699 Å)
Cite:NanJ sialidase in complex with Neu5,9Ac
To Be Published
3REN
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BU of 3ren by Molmil
CPF_2247, a novel alpha-amylase from Clostridium perfringens
Descriptor: 1,2-ETHANEDIOL, Glycosyl hydrolase, family 8, ...
Authors:Ficko-Blean, E, Stuart, C.P, Boraston, A.B.
Deposit date:2011-04-04
Release date:2011-05-18
Last modified:2013-09-04
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural analysis of CPF_2247, a novel alpha-amylase from Clostridium perfringens.
Proteins, 79, 2011
3QSP
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BU of 3qsp by Molmil
Analysis of a new family of widely distributed metal-independent alpha mannosidases provides unique insight into the processing of N-linked glycans, Streptococcus pneumoniae SP_2144 non-productive substrate complex with alpha-1,6-mannobiose
Descriptor: 1,2-ETHANEDIOL, Putative uncharacterized protein, alpha-D-mannopyranose-(1-6)-beta-D-mannopyranose
Authors:Gregg, K.J, Zandberg, W.F, Hehemann, J.-H, Whitworth, G.E, Deng, L.E, Vocadlo, D.J, Boraston, A.B.
Deposit date:2011-02-21
Release date:2011-03-09
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Analysis of a New Family of Widely Distributed Metal-independent {alpha}-Mannosidases Provides Unique Insight into the Processing of N-Linked Glycans.
J.Biol.Chem., 286, 2011
5FR0
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BU of 5fr0 by Molmil
The details of glycolipid glycan hydrolysis by the structural analysis of a family 123 glycoside hydrolase from Clostridium perfringens
Descriptor: 2-deoxy-2-[(difluoroacetyl)amino]-beta-D-galactopyranose, BETA-N-ACETYLGALACTOSAMINIDASE, PHOSPHATE ION
Authors:Noach, I, Pluvinage, B, Laurie, C, Abe, K.T, Alteen, M, Vocadlo, D.J, Boraston, A.B.
Deposit date:2015-12-14
Release date:2016-03-30
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:The Details of Glycolipid Glycan Hydrolysis by the Structural Analysis of a Family 123 Glycoside Hydrolase from Clostridium Perfringens
J.Mol.Biol., 428, 2016

224572

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