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PDB: 27 results

4NL4
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BU of 4nl4 by Molmil
PriA Helicase Bound to ADP
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Primosome assembly protein PriA, ZINC ION
Authors:Bhattacharyya, B, George, N.P, Keck, J.L.
Deposit date:2013-11-13
Release date:2014-01-08
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:Structural mechanisms of PriA-mediated DNA replication restart.
Proc.Natl.Acad.Sci.USA, 111, 2014
4NL8
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BU of 4nl8 by Molmil
PriA Helicase Bound to SSB C-terminal Tail Peptide
Descriptor: Primosome assembly protein PriA, Single-stranded DNA-binding protein, ZINC ION
Authors:Bhattacharyya, B, George, N.P, Thurmes, T.M, Keck, J.L.
Deposit date:2013-11-13
Release date:2014-01-08
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (4.08 Å)
Cite:Structural mechanisms of PriA-mediated DNA replication restart.
Proc.Natl.Acad.Sci.USA, 111, 2014
1EI7
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BU of 1ei7 by Molmil
TMV COAT PROTEIN REFINED FROM THE 4-LAYER AGGREGATE
Descriptor: COAT PROTEIN
Authors:Bhyravbhatla, B, Watowich, S.J, Caspar, D.L.
Deposit date:2000-02-24
Release date:2000-04-12
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:Refined atomic model of the four-layer aggregate of the tobacco mosaic virus coat protein at 2.4-A resolution.
Biophys.J., 74, 1998
3Q61
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BU of 3q61 by Molmil
3'-Fluoro Hexitol Nucleic Acid DNA Structure
Descriptor: DNA (5'-D(*GP*CP*GP*TP*AP*(F3H)P*AP*CP*GP*C)-3')
Authors:Seth, P.R, Allerson, C.R, Prakash, T.P, Siwkowski, A, Berdeja, A, Yu, J, Pallan, P.S, Watt, A.T, Gaus, H, Bhat, B, Egli, M, Swayze, E.E.
Deposit date:2010-12-30
Release date:2012-01-18
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.56 Å)
Cite:Synthesis, improved antisense activity and structural rationale for the divergent RNA affinities of 3'-fluoro hexitol nucleic acid (FHNA and Ara-FHNA) modified oligonucleotides.
J.Am.Chem.Soc., 133, 2011
2KWG
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BU of 2kwg by Molmil
Solution structure of a fully modified 2'-F/2'-OMe siRNA construct
Descriptor: 5'-R(*(GF2)P*(OMG)P*(GF2)P*(OMU)P*(AF2)P*(A2M)P*(AF2)P*(OMU)P*(AF2)P*(OMC)P*(AF2)P*(OMU)P*(UFT)P*(OMC)P*(UFT)P*(OMU)P*(CFZ)P*(A2M)P*(UFT)P*(OMU)P*(UFT))-3', 5'-R(P*(A2M)P*(UFT)P*(OMG)P*(AF2)P*(A2M)P*(GF2)P*(A2M)P*(AF2)P*(OMU)P*(GF2)P*(OMU)P*(AF2)P*(OMU)P*(UFT)P*(OMU)P*(AF2)P*(OMC)P*(CFZ)P*(OMC)P*(UFT)P*(OMU))-3'
Authors:Podbevsek, P, Bhat, B, Plavec, J.
Deposit date:2010-04-09
Release date:2010-07-21
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Solution-state structure of a fully alternately 2'-F/2'-OMe modified 42-nt dimeric siRNA construct.
Nucleic Acids Res., 38, 2010
6PYK
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BU of 6pyk by Molmil
P. mirabilis hemolysin A mutant - F80L
Descriptor: Hemolysin
Authors:Weaver, T.M, Novak, W.R.P, Bhattacharyya, B.
Deposit date:2019-07-30
Release date:2020-08-05
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:Structure of truncated hemolysin A variant F80L
To Be Published
5KDK
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BU of 5kdk by Molmil
Truncated hemolysin A from P. mirabilis at 2.0 Angstroms resolution crystallized in a high salt condition
Descriptor: Hemolysin
Authors:Novak, W.R.P, Bhattacharyya, B, Weaver, T.M.
Deposit date:2016-06-08
Release date:2017-06-14
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.002 Å)
Cite:Crystal structure of truncated hemolysin A from P. mirabilis at 2.0 Angstroms in high salt
To Be Published
5KEH
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BU of 5keh by Molmil
Truncated hemolysin A from P. mirabilis at 2.0 Angstroms resolution crystallized in a high salt condition
Descriptor: Hemolysin
Authors:Novak, W.R.P, Bhattacharyya, B, Weaver, T.M.
Deposit date:2016-06-09
Release date:2017-03-22
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (1.551 Å)
Cite:Proteolysis of truncated hemolysin A yields a stable dimerization interface.
Acta Crystallogr F Struct Biol Commun, 73, 2017
5KF3
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BU of 5kf3 by Molmil
Truncated hemolysin A from P. mirabilis Y134A at 2.2 Angstroms resolution
Descriptor: Hemolysin
Authors:Novak, W.R.P, Bhattacharyya, B, Weaver, T.M.
Deposit date:2016-06-11
Release date:2017-03-22
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Proteolysis of truncated hemolysin A yields a stable dimerization interface.
Acta Crystallogr F Struct Biol Commun, 73, 2017
5KKD
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BU of 5kkd by Molmil
Truncated hemolysin A Y134A from P. mirabilis at 2.1 Angstroms resolution crystallized in a high salt condition
Descriptor: Hemolysin, SULFATE ION
Authors:Novak, W.R.P, Bhattacharyya, B, Weaver, T.M.
Deposit date:2016-06-21
Release date:2017-03-22
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (2.13 Å)
Cite:Proteolysis of truncated hemolysin A yields a stable dimerization interface.
Acta Crystallogr F Struct Biol Commun, 73, 2017
8SBS
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BU of 8sbs by Molmil
Fumarate C - R126A in (3-(N-morpholino)propanesulfonic acid) at pH 7.5
Descriptor: Fumarate hydratase class II
Authors:Weaver, T.M, May, J, Bhattacharyya, B.
Deposit date:2023-04-04
Release date:2023-11-15
Method:X-RAY DIFFRACTION (1.91 Å)
Cite:Fumarate C - R126A in (3-(N-morpholino)propanesulfonic acid) at pH 7.5
To Be Published
6PZL
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BU of 6pzl by Molmil
P. mirabilis hemolysin A mutant - Q125A
Descriptor: GLYCEROL, Hemolysin
Authors:Weaver, T.M, Novak, W.R.P, Bhattacharyya, B.
Deposit date:2019-08-01
Release date:2020-08-05
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (1.17 Å)
Cite:Structure of the HpmA265 Q125A variant
To Be Published
6E8A
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BU of 6e8a by Molmil
Crystal structure of DcrB from Salmonella enterica at 1.92 Angstroms resolution
Descriptor: DUF1795 domain-containing protein
Authors:Rasmussen, D.M, Soens, R.W, Bhattacharyya, B, May, J.F.
Deposit date:2018-07-27
Release date:2018-10-31
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.92 Å)
Cite:The structure of DcrB, a lipoprotein from Salmonella enterica, reveals flexibility in the N-terminal segment of the Mog1p/PsbP-like fold.
J. Struct. Biol., 204, 2018
6NZC
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BU of 6nzc by Molmil
Crystal structure of E. coli fumarase C N326A variant with closed SS Loop at 1.40 angstrom resolution
Descriptor: CITRIC ACID, Fumarate hydratase class II
Authors:Weaver, T.M, May, J.F, Bhattacharyya, B.
Deposit date:2019-02-13
Release date:2019-09-25
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.403 Å)
Cite:Closed fumarase C active-site structures reveal SS Loop residue contribution in catalysis.
Febs Lett., 594, 2020
6NZA
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BU of 6nza by Molmil
Crystal structure of E. coli fumarase C K324A variant with closed SS Loop at 1.41 angstrom resolution
Descriptor: CITRIC ACID, Fumarate hydratase class II
Authors:Weaver, T.M, May, J.F, Bhattacharyya, B.
Deposit date:2019-02-13
Release date:2019-09-25
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.406 Å)
Cite:Closed fumarase C active-site structures reveal SS Loop residue contribution in catalysis.
Febs Lett., 594, 2020
6NZB
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BU of 6nzb by Molmil
Crystal structure of E. coli fumarase C S318A variant with closed SS Loop at 1.37 angstrom resolution
Descriptor: CITRIC ACID, Fumarate hydratase class II
Authors:Weaver, T.M, May, J.F, Bhattacharyya, B.
Deposit date:2019-02-13
Release date:2019-09-25
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.37 Å)
Cite:Closed fumarase C active-site structures reveal SS Loop residue contribution in catalysis.
Febs Lett., 594, 2020
6P3C
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BU of 6p3c by Molmil
E. coli fumarase mutant - T187A
Descriptor: CITRATE ANION, Fumarate hydratase class II
Authors:May, J.F, Bhattcharyya, B, Weaver, T.M.
Deposit date:2019-05-23
Release date:2020-05-27
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.459 Å)
Cite:Fumarase C variant at the active site
To Be Published
6NZ9
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BU of 6nz9 by Molmil
Crystal structure of E. coli fumarase C bound to citrate at 1.53 angstrom resolution
Descriptor: CITRIC ACID, Fumarate hydratase class II
Authors:Stuttgen, G.M, May, J.F, Bhattcharyya, B, Weaver, T.M.
Deposit date:2019-02-13
Release date:2019-09-25
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.528 Å)
Cite:Closed fumarase C active-site structures reveal SS Loop residue contribution in catalysis.
Febs Lett., 594, 2020
6OS7
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BU of 6os7 by Molmil
E. coli fumarase mutant - R126A
Descriptor: CITRATE ANION, Fumarate hydratase class II, GLYCEROL
Authors:Stuttgen, G.M, May, J.F, Bhattcharyya, B, Weaver, T.M.
Deposit date:2019-05-01
Release date:2020-05-06
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.36 Å)
Cite:Fumarase C variant that eliminates the B-site
To Be Published
3IYK
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BU of 3iyk by Molmil
Bluetongue virus structure reveals a sialic acid binding domain, amphipathic helices and a central coiled coil in the outer capsid proteins
Descriptor: 2-O-methyl-5-N-acetyl-alpha-D-neuraminic acid, VP2, VP5
Authors:Zhang, X, Boyce, M, Bhattacharya, B, Zhang, X, Schein, S, Roy, P, Zhou, Z.H.
Deposit date:2010-01-25
Release date:2010-04-07
Last modified:2024-02-21
Method:ELECTRON MICROSCOPY (7 Å)
Cite:Bluetongue virus coat protein VP2 contains sialic acid-binding domains, and VP5 resembles enveloped virus fusion proteins.
Proc.Natl.Acad.Sci.USA, 107, 2010
3QH5
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BU of 3qh5 by Molmil
Structure of Thermolysin in complex with N-Carbobenzyloxy-L-aspartic acid and L-Phenylalanine Methyl Ester
Descriptor: CALCIUM ION, DI(HYDROXYETHYL)ETHER, N-[(benzyloxy)carbonyl]-L-aspartic acid, ...
Authors:Birrane, G, Bhyravbhatla, B, Navia, M.
Deposit date:2011-01-25
Release date:2012-01-04
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Synthesis of Aspartame by Thermolysin: An X-ray Structural Study.
ACS MED.CHEM.LETT., 5, 2014
3QGO
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BU of 3qgo by Molmil
Structure of Thermolysin in complex with L-Phenylalanine methylester
Descriptor: ACETATE ION, CALCIUM ION, DIMETHYL SULFOXIDE, ...
Authors:Birrane, G, Bhyravbhatla, B, Navia, M.
Deposit date:2011-01-24
Release date:2012-01-04
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Synthesis of Aspartame by Thermolysin: An X-ray Structural Study.
ACS MED.CHEM.LETT., 5, 2014
3QH1
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BU of 3qh1 by Molmil
Structure of Thermolysin in complex with N-benzyloxycarbonyl-L-aspartic acid
Descriptor: CALCIUM ION, N-[(benzyloxy)carbonyl]-L-aspartic acid, Thermolysin, ...
Authors:Birrane, G, Bhyravbhatla, B, Navia, M.
Deposit date:2011-01-25
Release date:2012-01-04
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Synthesis of Aspartame by Thermolysin: An X-ray Structural Study.
ACS MED.CHEM.LETT., 5, 2014
5SZ8
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BU of 5sz8 by Molmil
Truncated hemolysin A Q125A/Y134A from P. mirabilis at 1.8 Angstroms resolution crystallized in a high salt condition
Descriptor: Hemolysin, SULFATE ION
Authors:Novak, W.R.P, Bhattacharyya, B, Weaver, T.M.
Deposit date:2016-08-12
Release date:2017-03-22
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.83 Å)
Cite:Proteolysis of truncated hemolysin A yields a stable dimerization interface.
Acta Crystallogr F Struct Biol Commun, 73, 2017
1X9F
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BU of 1x9f by Molmil
Hemoglobin Dodecamer from Lumbricus Erythrocruorin
Descriptor: CARBON MONOXIDE, Globin II, extracellular, ...
Authors:Strand, K, Knapp, J.E, Bhyravbhatla, B, Royer Jr, W.E.
Deposit date:2004-08-20
Release date:2004-11-30
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Crystal structure of the hemoglobin dodecamer from lumbricus erythrocruorin: allosteric core of giant annelid respiratory complexes
J.Mol.Biol., 344, 2004

 

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