3DRG
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![BU of 3drg by Molmil](/molmil-images/mine/3drg) | Lactococcal OppA complexed with bradykinin in the closed conformation | Descriptor: | Bradykinin, CHLORIDE ION, Oligopeptide-binding protein oppA | Authors: | Berntsson, R.P.-A, Doeven, M.K, Duurkens, R.H, Sengupta, D, Marrink, S.-J, Thunnissen, A.-M, Poolman, B, Slotboom, D.-J. | Deposit date: | 2008-07-11 | Release date: | 2009-03-31 | Last modified: | 2023-11-01 | Method: | X-RAY DIFFRACTION (2.5 Å) | Cite: | The structural basis for peptide selection by the transport receptor OppA Embo J., 28, 2009
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3DRK
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![BU of 3drk by Molmil](/molmil-images/mine/3drk) | Crystal structure of Lactococcal OppA co-crystallized with Neuropeptide S in an open conformation | Descriptor: | Neuropeptide S, Oligopeptide-binding protein oppA | Authors: | Berntsson, R.P.-A, Doeven, M.K, Duurkens, R.H, Sengupta, D, Marrink, S.-J, Thunnissen, A.-M, Poolman, B, Slotboom, D.-J. | Deposit date: | 2008-07-11 | Release date: | 2009-03-31 | Last modified: | 2023-11-01 | Method: | X-RAY DIFFRACTION (1.8 Å) | Cite: | The structural basis for peptide selection by the transport receptor OppA Embo J., 28, 2009
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7AED
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![BU of 7aed by Molmil](/molmil-images/mine/7aed) | VirB8 domain of PrgL from Enterococcus faecalis pCF10 | Descriptor: | 2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, PrgL | Authors: | Jaeger, F, Berntsson, R.P.A. | Deposit date: | 2020-09-17 | Release date: | 2020-11-18 | Last modified: | 2024-06-19 | Method: | X-RAY DIFFRACTION (1.753 Å) | Cite: | Structure of the enterococcal T4SS protein PrgL reveals unique dimerization interface in the VirB8 protein family. Structure, 30, 2022
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6QEQ
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![BU of 6qeq by Molmil](/molmil-images/mine/6qeq) | PcfF from Enterococcus faecalis pCF10 | Descriptor: | PcfF | Authors: | Rehman, S, Berntsson, R.P.A. | Deposit date: | 2019-01-08 | Release date: | 2019-05-01 | Last modified: | 2019-10-02 | Method: | X-RAY DIFFRACTION (1.9 Å) | Cite: | Enterococcal PcfF Is a Ribbon-Helix-Helix Protein That Recruits the Relaxase PcfG Through Binding and Bending of the oriT Sequence. Front Microbiol, 10, 2019
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8S4T
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![BU of 8s4t by Molmil](/molmil-images/mine/8s4t) | |
8S4S
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![BU of 8s4s by Molmil](/molmil-images/mine/8s4s) | PrgE from plasmid pCF10 | Descriptor: | POTASSIUM ION, PrgE, SULFATE ION | Authors: | Breidenstein, A, Berntsson, R.P.-A. | Deposit date: | 2024-02-22 | Release date: | 2024-05-29 | Last modified: | 2024-07-03 | Method: | X-RAY DIFFRACTION (2.7 Å) | Cite: | PrgE: an OB-fold protein from plasmid pCF10 with striking differences to prototypical bacterial SSBs. Life Sci Alliance, 7, 2024
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8QZG
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![BU of 8qzg by Molmil](/molmil-images/mine/8qzg) | 1,3 L,D-transpeptidase from Gluconobacter oxydans | Descriptor: | CHLORIDE ION, SODIUM ION, YkuD domain-containing protein | Authors: | ter Beek, J, Berntsson, R.P. | Deposit date: | 2023-10-27 | Release date: | 2023-11-08 | Last modified: | 2024-03-06 | Method: | X-RAY DIFFRACTION (1.73 Å) | Cite: | A distinctive family of L,D-transpeptidases catalyzing L-Ala-mDAP crosslinks in Alpha- and Betaproteobacteria. Nat Commun, 15, 2024
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8BSA
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![BU of 8bsa by Molmil](/molmil-images/mine/8bsa) | Vc1313-LBD bound to D-arginine | Descriptor: | D-ARGININE, Methyl-accepting chemotaxis protein | Authors: | ter Beek, J, Berntsson, R.P.-A. | Deposit date: | 2022-11-24 | Release date: | 2023-06-07 | Last modified: | 2023-11-15 | Method: | X-RAY DIFFRACTION (1.9 Å) | Cite: | D-amino acids signal a stress-dependent run-away response in Vibrio cholerae. Nat Microbiol, 8, 2023
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8BSB
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![BU of 8bsb by Molmil](/molmil-images/mine/8bsb) | Vc1313-LBD bound to D-lysine | Descriptor: | D-LYSINE, Methyl-accepting chemotaxis protein | Authors: | ter Beek, J, Berntsson, R.P.-A. | Deposit date: | 2022-11-24 | Release date: | 2023-06-07 | Last modified: | 2024-05-01 | Method: | X-RAY DIFFRACTION (1.9 Å) | Cite: | D-amino acids signal a stress-dependent run-away response in Vibrio cholerae. Nat Microbiol, 8, 2023
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8S0U
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![BU of 8s0u by Molmil](/molmil-images/mine/8s0u) | |
8A1B
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![BU of 8a1b by Molmil](/molmil-images/mine/8a1b) | |
8A1C
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![BU of 8a1c by Molmil](/molmil-images/mine/8a1c) | |
8BEG
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![BU of 8beg by Molmil](/molmil-images/mine/8beg) | Structure of Ig-like domains from PrgB | Descriptor: | MAGNESIUM ION, PrgB | Authors: | Jarva, M, Schmitt, A, Berntsson, R.P.-A. | Deposit date: | 2022-10-21 | Release date: | 2022-11-30 | Last modified: | 2024-05-01 | Method: | X-RAY DIFFRACTION (1.84 Å) | Cite: | Structural foundation for the role of enterococcal PrgB in conjugation, biofilm formation, and virulence. Elife, 12, 2023
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6EVU
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![BU of 6evu by Molmil](/molmil-images/mine/6evu) | Adhesin domain of PrgB from Enterococcus faecalis | Descriptor: | 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, PHOSPHATE ION, PrgB | Authors: | Schmitt, A, Berntsson, R.P.A. | Deposit date: | 2017-11-02 | Release date: | 2018-05-16 | Last modified: | 2024-05-08 | Method: | X-RAY DIFFRACTION (1.598 Å) | Cite: | PrgB promotes aggregation, biofilm formation, and conjugation through DNA binding and compaction. Mol. Microbiol., 109, 2018
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6GED
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![BU of 6ged by Molmil](/molmil-images/mine/6ged) | Adhesin domain of PrgB from Enterococcus faecalis bound to DNA | Descriptor: | 1,2-ETHANEDIOL, DNA (5'-D(P*CP*GP*GP*GP*CP*CP*GP*CP*CP*C)-3'), DNA (5'-D(P*GP*GP*GP*CP*GP*GP*CP*CP*CP*G)-3'), ... | Authors: | Schmitt, A, Berntsson, R.P.A. | Deposit date: | 2018-04-26 | Release date: | 2018-05-16 | Last modified: | 2024-01-17 | Method: | X-RAY DIFFRACTION (1.794 Å) | Cite: | PrgB promotes aggregation, biofilm formation, and conjugation through DNA binding and compaction. Mol. Microbiol., 109, 2018
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5LUZ
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![BU of 5luz by Molmil](/molmil-images/mine/5luz) | Structure of Human Neurolysin (E475Q) in complex with neurotensin peptide products | Descriptor: | CHLORIDE ION, GLYCEROL, Neurolysin, ... | Authors: | Masuyer, G, Berntsson, R.P.-A, Teixeira, P.F, Kmiec, B, Glaser, E, Stenmark, P. | Deposit date: | 2016-09-12 | Release date: | 2017-12-06 | Last modified: | 2024-01-17 | Method: | X-RAY DIFFRACTION (2.7 Å) | Cite: | Mechanism of Peptide Binding and Cleavage by the Human Mitochondrial Peptidase Neurolysin. J. Mol. Biol., 430, 2018
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6EKV
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![BU of 6ekv by Molmil](/molmil-images/mine/6ekv) | |
5LV0
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![BU of 5lv0 by Molmil](/molmil-images/mine/5lv0) | Structure of Human Neurolysin (E475Q) in complex with amyloid-beta 35-40 peptide product | Descriptor: | CHLORIDE ION, GLY-VAL-VAL amyloid 35-40 fragment, Neurolysin, ... | Authors: | Masuyer, G, Berntsson, R.P.-A, Teixeira, P.F, Kmiec, B, Glaser, E, Stenmark, P. | Deposit date: | 2016-09-12 | Release date: | 2017-12-06 | Last modified: | 2024-01-17 | Method: | X-RAY DIFFRACTION (2.7 Å) | Cite: | Structural and functional analysis of Neurolysin, a new component of the mitochondrial peptidolytic network To Be Published
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3RLB
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![BU of 3rlb by Molmil](/molmil-images/mine/3rlb) | Crystal structure at 2.0 A of the S-component for thiamin from an ECF-type ABC transporter | Descriptor: | 3-(4-AMINO-2-METHYL-PYRIMIDIN-5-YLMETHYL)-5-(2-HYDROXY-ETHYL)-4-METHYL-THIAZOL-3-IUM, ThiT, nonyl beta-D-glucopyranoside | Authors: | Erkens, G.B, Berntsson, R.P.-A, Fulyani, F, Majsnerowska, M, Vujicic-Zagar, A, ter Beek, J, Poolman, B, Slotboom, D.J. | Deposit date: | 2011-04-19 | Release date: | 2011-06-29 | Last modified: | 2024-02-28 | Method: | X-RAY DIFFRACTION (2 Å) | Cite: | The structural basis of modularity in ECF-type ABC transporters. Nat.Struct.Mol.Biol., 18, 2011
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3TCF
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![BU of 3tcf by Molmil](/molmil-images/mine/3tcf) | Crystal structure of E. coli OppA complexed with endogenous ligands | Descriptor: | Endogenous peptide, Periplasmic oligopeptide-binding protein | Authors: | Klepsch, M.M, Kovermann, M, Low, C, Balbach, J, de Gier, J.W, Slotboom, D.J, Berntsson, R.P.-A. | Deposit date: | 2011-08-09 | Release date: | 2011-10-12 | Last modified: | 2017-10-25 | Method: | X-RAY DIFFRACTION (2 Å) | Cite: | Escherichia coli peptide binding protein OppA has a preference for positively charged peptides. J.Mol.Biol., 414, 2011
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3TCG
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![BU of 3tcg by Molmil](/molmil-images/mine/3tcg) | Crystal structure of E. coli OppA complexed with the tripeptide KGE | Descriptor: | KGE Peptide, Periplasmic oligopeptide-binding protein | Authors: | Klepsch, M.M, Kovermann, M, Low, C, Balbach, J, de Gier, J.W, Slotboom, D.J, Berntsson, R.P.-A. | Deposit date: | 2011-08-09 | Release date: | 2011-10-12 | Last modified: | 2017-10-25 | Method: | X-RAY DIFFRACTION (2 Å) | Cite: | Escherichia coli peptide binding protein OppA has a preference for positively charged peptides. J.Mol.Biol., 414, 2011
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3TCH
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![BU of 3tch by Molmil](/molmil-images/mine/3tch) | Crystal structure of E. coli OppA in an open conformation | Descriptor: | Periplasmic oligopeptide-binding protein | Authors: | Klepsch, M.M, Kovermann, M, Low, C, Balbach, J, de Gier, J.W, Slotboom, D.J, Berntsson, R.P.-A. | Deposit date: | 2011-08-09 | Release date: | 2011-10-12 | Last modified: | 2012-01-11 | Method: | X-RAY DIFFRACTION (1.98 Å) | Cite: | Escherichia coli peptide binding protein OppA has a preference for positively charged peptides. J.Mol.Biol., 414, 2011
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