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PDB: 251 results

8CV1
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BU of 8cv1 by Molmil
ACP1-KS-AT domains of mycobacterial Pks13
Descriptor: Polyketide synthase PKS13, UNKNOWN LIGAND
Authors:Kim, S.K, Dickinson, M.S, Finer-Moore, J.S, Rosenberg, O.S, Stroud, R.M.
Deposit date:2022-05-17
Release date:2023-02-15
Last modified:2023-03-29
Method:ELECTRON MICROSCOPY (2.6 Å)
Cite:Structure and dynamics of the essential endogenous mycobacterial polyketide synthase Pks13.
Nat.Struct.Mol.Biol., 30, 2023
3GAY
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BU of 3gay by Molmil
Structure of Giardia fructose-1,6-biphosphate aldolase in complex with tagatose-1,6-biphosphate
Descriptor: 1,6-di-O-phosphono-D-tagatose, Fructose-bisphosphate aldolase, ZINC ION
Authors:Galkin, A, Herzberg, O.
Deposit date:2009-02-18
Release date:2009-03-31
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural insights into the substrate binding and stereoselectivity of giardia fructose-1,6-bisphosphate aldolase.
Biochemistry, 48, 2009
1KTW
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BU of 1ktw by Molmil
IOTA-CARRAGEENASE COMPLEXED TO IOTA-CARRAGEENAN FRAGMENTS
Descriptor: 3,6-anhydro-2-O-sulfo-alpha-D-galactopyranose-(1-3)-4-O-sulfo-beta-D-galactopyranose, 3,6-anhydro-2-O-sulfo-alpha-D-galactopyranose-(1-3)-4-O-sulfo-beta-D-galactopyranose-(1-4)-3,6-anhydro-2-O-sulfo-alpha-D-galactopyranose-(1-3)-4-O-sulfo-beta-D-galactopyranose, CALCIUM ION, ...
Authors:Michel, G, Kahn, R, Dideberg, O.
Deposit date:2002-01-18
Release date:2003-06-10
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (2 Å)
Cite:The Structural Bases of the Processive Degradation of iota-Carrageenan, a Main Cell Wall Polysaccharide of Red Algae.
J.Mol.Biol., 334, 2003
7UK4
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BU of 7uk4 by Molmil
KS-AT di-domain of mycobacterial Pks13 with endogenous KS ligand bound
Descriptor: Polyketide synthase PKS13, UNKNOWN LIGAND
Authors:Kim, S.K, Dickinson, M.S, Finer-Moore, J.S, Rosenberg, O.S, Stroud, R.M.
Deposit date:2022-03-31
Release date:2023-02-15
Last modified:2023-03-29
Method:ELECTRON MICROSCOPY (1.94 Å)
Cite:Structure and dynamics of the essential endogenous mycobacterial polyketide synthase Pks13.
Nat.Struct.Mol.Biol., 30, 2023
8SOT
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BU of 8sot by Molmil
Structure of the PPIase domain of borrelial BB0108
Descriptor: Basic membrane protein, GLYCEROL
Authors:Shakya, A.K, Herzberg, O.
Deposit date:2023-04-30
Release date:2023-10-11
Last modified:2024-04-24
Method:X-RAY DIFFRACTION (1.99 Å)
Cite:A unique borrelial protein facilitates microbial immune evasion.
Mbio, 14, 2023
1MOV
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BU of 1mov by Molmil
Crystal structure of Coral protein mutant
Descriptor: GFP-like non-fluorescent chromoprotein, IODIDE ION
Authors:Prescott, M, Ling, M, Beddoe, T, Oakley, A.J, Dove, S, Hoegh-Guldberg, O, Devenish, R.J, Rossjohn, J.
Deposit date:2002-09-10
Release date:2003-04-08
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:The 2.2 a crystal structure of a pocilloporin pigment reveals a nonplanar chromophore conformation.
Structure, 11, 2003
6UMM
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BU of 6umm by Molmil
A complete structure of the ESX-3 translocon complex
Descriptor: ESX-3 secretion system ATPase EccB3, ESX-3 secretion system protein EccC3, ESX-3 secretion system protein EccD3, ...
Authors:Poweleit, N, Rosenberg, O.S.
Deposit date:2019-10-09
Release date:2019-10-23
Last modified:2024-03-20
Method:ELECTRON MICROSCOPY (3.7 Å)
Cite:A large inner membrane pore defines the ESX translocon
To Be Published
8P33
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BU of 8p33 by Molmil
BB0238 from Borrelia burgdorferi
Descriptor: BB0238
Authors:Brangulis, K, Foor, S.D, Shakya, A.K, Rana, V.S, Bista, S, Kitsou, C, Ronzetti, M, Linden, S.B, Altieri, A.S, Akopjana, I, Baljinnyam, B, Nelson, D.C, Simeonov, A, Herzberg, O, Caimano, M.J, Pal, U.
Deposit date:2023-05-16
Release date:2023-10-11
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:A unique borrelial protein facilitates microbial immune evasion.
Mbio, 14, 2023
8P32
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BU of 8p32 by Molmil
BB0238 from Borrelia burgdorferi, Se-Met data for Leu240Met mutant
Descriptor: BB0238
Authors:Brangulis, K, Foor, S.D, Shakya, A.K, Rana, V.S, Bista, S, Kitsou, C, Ronzetti, M, Linden, S.B, Altieri, A.S, Akopjana, I, Baljinnyam, B, Nelson, D.C, Simeonov, A, Herzberg, O, Caimano, M.J, Pal, U.
Deposit date:2023-05-16
Release date:2023-10-11
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:A unique borrelial protein facilitates microbial immune evasion.
Mbio, 14, 2023
8CV0
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BU of 8cv0 by Molmil
KS-AT domains of mycobacterial Pks13 with outward AT conformation
Descriptor: Polyketide synthase PKS13, UNKNOWN LIGAND
Authors:Kim, S.K, Dickinson, M.S, Finer-Moore, J.S, Rosenberg, O.S, Stroud, R.M.
Deposit date:2022-05-17
Release date:2023-02-15
Last modified:2023-03-29
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Structure and dynamics of the essential endogenous mycobacterial polyketide synthase Pks13.
Nat.Struct.Mol.Biol., 30, 2023
8CUZ
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BU of 8cuz by Molmil
KS-AT domains of mycobacterial Pks13 with inward AT conformation
Descriptor: Polyketide synthase PKS13, UNKNOWN LIGAND
Authors:Kim, S.K, Dickinson, M.S, Finer-Moore, J.S, Rosenberg, O.S, Stroud, R.M.
Deposit date:2022-05-17
Release date:2023-02-15
Last modified:2023-03-29
Method:ELECTRON MICROSCOPY (3 Å)
Cite:Structure and dynamics of the essential endogenous mycobacterial polyketide synthase Pks13.
Nat.Struct.Mol.Biol., 30, 2023
5DPX
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BU of 5dpx by Molmil
1,2,4-Triazole-3-thione compounds as inhibitors of L1, di-zinc metallo-beta-lactamases.
Descriptor: 5-(2-methylphenyl)-3H-1,2,4-triazole-3-thione, Metallo-beta-lactamase L1 type 3, SULFATE ION, ...
Authors:Nauton, L, Garau, G, Khan, R, Dideberg, O.
Deposit date:2015-09-14
Release date:2017-01-11
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:1,2,4-Triazole-3-thione Compounds as Inhibitors of Dizinc Metallo-beta-lactamases.
ChemMedChem, 12, 2017
4UUQ
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BU of 4uuq by Molmil
Crystal structure of human mono-glyceride lipase in complex with SAR127303
Descriptor: 4-({[(4-chlorophenyl)sulfonyl]amino}methyl)piperidine-1-carboxylic acid, MONOGLYCERIDE LIPASE
Authors:Griebel, G, Pichat, P, Beeske, S, Leroy, T, Redon, N, Francon, D, Bert, L, Even, L, Lopez-Grancha, M, Tolstykh, T, Sun, F, Yu, Q, Brittain, S, Arlt, H, He, T, Zhang, B, Wiederschain, D, Bertrand, T, Houtman, J, Rak, A, Vallee, F, Michot, N, Auge, F, Menet, V, Bergis, O.E, George, P, Avenet, P, Mikol, V, Didier, M, Escoubet, J.
Deposit date:2014-07-30
Release date:2015-01-21
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.36 Å)
Cite:Selective Blockade of the Hydrolysis of the Endocannabinoid 2-Arachidonoylglycerol Impairs Learning and Memory Performance While Producing Antinociceptive Activity in Rodents.
Sci.Rep., 5, 2015
3GAK
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BU of 3gak by Molmil
Structure of Giardia fructose-1,6-biphosphate aldolase
Descriptor: Fructose-bisphosphate aldolase, SULFATE ION, ZINC ION
Authors:Galkin, A, Herzberg, O.
Deposit date:2009-02-17
Release date:2009-03-31
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Structural insights into the substrate binding and stereoselectivity of giardia fructose-1,6-bisphosphate aldolase.
Biochemistry, 48, 2009
3ZNB
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BU of 3znb by Molmil
METALLO-BETA-LACTAMASE (ZN, HG-BOUND FORM)
Descriptor: MERCURY (II) ION, METALLO-BETA-LACTAMASE, SODIUM ION, ...
Authors:Concha, N.O, Herzberg, O.
Deposit date:1997-10-15
Release date:1998-01-28
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Crystal structures of the cadmium- and mercury-substituted metallo-beta-lactamase from Bacteroides fragilis.
Protein Sci., 6, 1997
1F76
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BU of 1f76 by Molmil
ESCHERICHIA COLI DIHYDROOROTATE DEHYDROGENASE
Descriptor: Dihydroorotate dehydrogenase (quinone), FLAVIN MONONUCLEOTIDE, FORMIC ACID, ...
Authors:Norager, S, Jensen, K.F, Bjornberg, O, Larsen, S.
Deposit date:2000-06-26
Release date:2002-10-16
Last modified:2014-03-12
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:E. coli Dihydroorotate Dehydrogenase Reveals Structural and Functional Distinction between different classes of dihydroorotate dehydrogenases
Structure, 10, 2002
2ZNB
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BU of 2znb by Molmil
METALLO-BETA-LACTAMASE (CADMIUM-BOUND FORM)
Descriptor: CADMIUM ION, METALLO-BETA-LACTAMASE, SODIUM ION
Authors:Concha, N.O, Herzberg, O.
Deposit date:1997-10-14
Release date:1998-01-28
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Crystal structures of the cadmium- and mercury-substituted metallo-beta-lactamase from Bacteroides fragilis.
Protein Sci., 6, 1997
1J85
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BU of 1j85 by Molmil
Structure of YibK from Haemophilus influenzae (HI0766), a truncated sequence homolog of tRNA (guanosine-2'-O-) methyltransferase (SpoU)
Descriptor: YibK
Authors:Lim, K, Zhang, H, Toedt, J, Tempcyzk, A, Krajewski, W, Howard, A, Eisenstein, E, Herzberg, O, Structure 2 Function Project (S2F)
Deposit date:2001-05-20
Release date:2003-02-25
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structure of the YibK methyltransferase from Haemophilus influenzae (HI0766): A cofactor bound at a site formed by a knot
Proteins, 51, 2003
1X8I
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BU of 1x8i by Molmil
Crystal Structure of the Zinc Carbapenemase CphA in Complex with the Antibiotic Biapenem
Descriptor: 5H-PYRAZOLO(1,2-A)(1,2,4)TRIAZOL-4-IUM, 6-((2-CARBOXY-6-(1-HYDROXYETHYL)-4-METHYL-7-OXO-1-AZABICYCLO(3.2.0)HEPT-2-EN-3-YL)THIO)-6,7-DIHYDRO-, HYDROXIDE, ...
Authors:Garau, G, Dideberg, O.
Deposit date:2004-08-18
Release date:2004-12-28
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:A Metallo-beta-lactamase Enzyme in Action: Crystal Structures of the Monozinc Carbapenemase CphA and its Complex with Biapenem
J.Mol.Biol., 345, 2005
1X8G
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BU of 1x8g by Molmil
Crystal Structure of the Mono-Zinc Carbapenemase CphA from Aeromonas Hydrophyla
Descriptor: Beta-lactamase, CARBONATE ION, SULFATE ION, ...
Authors:Garau, G, Dideberg, O.
Deposit date:2004-08-18
Release date:2004-12-28
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:A Metallo-beta-lactamase Enzyme in Action: Crystal Structures of the Monozinc Carbapenemase CphA and its Complex with Biapenem
J.Mol.Biol., 345, 2005
1BLH
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BU of 1blh by Molmil
STRUCTURE OF A PHOSPHONATE-INHIBITED BETA-LACTAMASE. AN ANALOG OF THE TETRAHEDRAL TRANSITION STATE(SLASH)INTERMEDIATE OF BETA-LACTAM HYDROLYSIS
Descriptor: BETA-LACTAMASE, [[N-(BENZYLOXYCARBONYL)AMINO]METHYL]PHOSPHATE
Authors:Chen, C.C.H, Herzberg, O.
Deposit date:1993-09-30
Release date:1994-08-31
Last modified:2024-06-05
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structure of a phosphonate-inhibited beta-lactamase. An analog of the tetrahedral transition state/intermediate of beta-lactam hydrolysis.
J.Mol.Biol., 234, 1993
1JUE
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BU of 1jue by Molmil
1.8 A resolution structure of native lactococcus lactis dihydroorotate dehydrogenase A
Descriptor: ACETIC ACID, FLAVIN MONONUCLEOTIDE, GLYCEROL, ...
Authors:Norager, S, Arent, S, Bjornberg, O, Ottosen, M, Lo Leggio, L, Jensen, K.F, Larsen, S.
Deposit date:2001-08-24
Release date:2003-09-09
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Lactococcus lactis dihydroorotate dehydrogenase A mutants reveal important facets of the enzymatic function
J.Biol.Chem., 278, 2003
4OLC
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BU of 4olc by Molmil
Carbamate kinase from Giardia lamblia thiocarbamoylated by disulfiram on Cys242
Descriptor: CITRIC ACID, Carbamate kinase, DIETHYLCARBAMODITHIOIC ACID
Authors:Lim, K, Herzberg, O.
Deposit date:2014-01-23
Release date:2014-02-26
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structural Basis for Inactivation of Giardia lamblia Carbamate Kinase by Disulfiram.
J.Biol.Chem., 289, 2014
2QDS
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BU of 2qds by Molmil
Crystal Structure of the Zinc Carbapenemase CPHA in Complex with the Inhibitor D-Captopril
Descriptor: 1-(3-MERCAPTO-2-METHYL-PROPIONYL)-PYRROLIDINE-2-CARBOXYLIC ACID, Beta-lactamase, GLYCEROL, ...
Authors:Garau, G, Dideberg, O.
Deposit date:2007-06-21
Release date:2007-07-17
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.66 Å)
Cite:Structural basis for the broad-spectrum inhibition of metallo-beta-lactamases by thiols.
Org.Biomol.Chem., 6, 2008
2GFK
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BU of 2gfk by Molmil
Crystal structure of the zinc-beta-lactamase l1 from stenotrophomonas maltophilia (inhibitor 2)
Descriptor: 2,5-DIPHENYLFURAN-3,4-DICARBOXYLIC ACID, DI(HYDROXYETHYL)ETHER, Metallo-beta-lactamase L1, ...
Authors:Nauton, L, Garau, G, Kahn, R, Dideberg, O.
Deposit date:2006-03-22
Release date:2007-03-27
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural insights into the design of inhibitors for the L1 metallo-beta-lactamase from Stenotrophomonas maltophilia.
J.Mol.Biol., 375, 2008

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