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PDB: 13 results

6QJT
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BU of 6qjt by Molmil
Thermophage P23-45 in situ procapsid portal protein
Descriptor: Portal protein
Authors:Bayfield, O.W, Antson, A.A.
Deposit date:2019-01-24
Release date:2020-03-25
Last modified:2024-05-15
Method:ELECTRON MICROSCOPY (3.74 Å)
Cite:Cryo-EM structure in situ reveals a molecular switch that safeguards virus against genome loss.
Elife, 9, 2020
4B27
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BU of 4b27 by Molmil
Trp RNA-binding attenuation protein: modifying symmetry and stability of a circular oligomer
Descriptor: TRANSCRIPTION ATTENUATION PROTEIN MTRB, TRYPTOPHAN
Authors:Bayfield, O.W, Chen, C, Patterson, A.R, Luan, W, Smits, C, Gollnick, P, Antson, A.A.
Deposit date:2012-07-12
Release date:2012-09-19
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.72 Å)
Cite:Trp RNA-Binding Attenuation Protein: Modifying Symmetry and Stability of a Circular Oligomer.
Plos One, 7, 2012
8CKB
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BU of 8ckb by Molmil
Asymmetric reconstruction of the crAss001 virion
Descriptor: Auxiliary capsid protein gp36, Cargo protein 1 gp45, Head fiber dimer protein gp29, ...
Authors:Bayfield, O.W, Shkoporov, A.N, Yutin, N, Khokhlova, E.V, Smith, J.L.R, Hawkins, D.E.D.P, Koonin, E.V, Hill, C, Antson, A.A.
Deposit date:2023-02-16
Release date:2023-11-22
Last modified:2024-10-16
Method:ELECTRON MICROSCOPY (4.39 Å)
Cite:Structural atlas of the most abundant human gut virus
Nature
6IBG
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BU of 6ibg by Molmil
Bacteriophage G20c portal protein crystal structure for construct with intact N-terminus
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, Portal protein
Authors:Bayfield, O.W, Klimuk, E, Winkler, D.C, Hesketh, E.L, Chechik, M, Cheng, N, Dykeman, E.C, Minakhin, L, Ranson, N.A, Severinov, K, Steven, A.C, Antson, A.A.
Deposit date:2018-11-30
Release date:2019-01-23
Last modified:2024-06-19
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Cryo-EM structure and in vitro DNA packaging of a thermophilic virus with supersized T=7 capsids.
Proc. Natl. Acad. Sci. U.S.A., 116, 2019
6I9E
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BU of 6i9e by Molmil
Thermophage P23-45 empty expanded capsid
Descriptor: Auxiliary protein, Major head protein
Authors:Bayfield, O.W, Klimuk, E, Winkler, D.C, Hesketh, E.L, Chechik, M, Cheng, N, Dykeman, E.C, Minakhin, L, Ranson, N.A, Severinov, K, Steven, A.C, Antson, A.A.
Deposit date:2018-11-23
Release date:2019-02-06
Last modified:2024-07-10
Method:ELECTRON MICROSCOPY (3.74 Å)
Cite:Cryo-EM structure and in vitro DNA packaging of a thermophilic virus with supersized T=7 capsids.
Proc. Natl. Acad. Sci. U.S.A., 116, 2019
6IBC
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BU of 6ibc by Molmil
Thermophage P23-45 procapsid
Descriptor: Major head protein
Authors:Bayfield, O.W, Klimuk, E, Winkler, D.C, Hesketh, E.L, Chechik, M, Cheng, N, Dykeman, E.C, Minakhin, L, Ranson, N.A, Severinov, K, Steven, A.C, Antson, A.A.
Deposit date:2018-11-29
Release date:2019-02-13
Last modified:2024-07-10
Method:ELECTRON MICROSCOPY (4.39 Å)
Cite:Cryo-EM structure and in vitro DNA packaging of a thermophilic virus with supersized T=7 capsids.
Proc. Natl. Acad. Sci. U.S.A., 116, 2019
7QOG
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BU of 7qog by Molmil
Portal protein assembly of the phicrAss001 virion with C12 symmetry imposed
Descriptor: Cargo protein 1 gp45, Portal protein gp20, Ring protein 1 gp43, ...
Authors:Bayfield, O.W, Shkoporov, A.N, Yutin, N, Khokhlova, E.V, Smith, J.L.R, Hawkins, D.E.D.P, Koonin, E.V, Hill, C, Antson, A.A.
Deposit date:2021-12-24
Release date:2023-03-29
Last modified:2024-07-17
Method:ELECTRON MICROSCOPY (3.09 Å)
Cite:Structural atlas of a human gut crassvirus.
Nature, 617, 2023
7QOF
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BU of 7qof by Molmil
Icosahedral capsid of the phicrAss001 virion
Descriptor: Auxiliary capsid protein gp36, Head fiber dimer protein gp29, Head fiber trimer protein gp21, ...
Authors:Bayfield, O.W, Shkoporov, A.N, Yutin, N, Khokhlova, E.V, Smith, J.L.R, Hawkins, D.E.D.P, Koonin, E.V, Hill, C, Antson, A.A.
Deposit date:2021-12-24
Release date:2023-03-29
Last modified:2024-07-17
Method:ELECTRON MICROSCOPY (3.01 Å)
Cite:Structural atlas of a human gut crassvirus.
Nature, 617, 2023
7QOH
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BU of 7qoh by Molmil
Unique vertex of the phicrAss001 virion with C5 symmetry imposed
Descriptor: Auxiliary capsid protein gp36, Head fiber trimer protein gp21, MAGNESIUM ION, ...
Authors:Bayfield, O.W, Shkoporov, A.N, Yutin, N, Khokhlova, E.V, Smith, J.L.R, Hawkins, D.E.D.P, Koonin, E.V, Hill, C, Antson, A.A.
Deposit date:2021-12-24
Release date:2023-03-29
Last modified:2024-10-16
Method:ELECTRON MICROSCOPY (3.32 Å)
Cite:Structural atlas of a human gut crassvirus.
Nature, 617, 2023
7QOK
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BU of 7qok by Molmil
Tail muzzle assembly of the phicrAss001 virion with C6 symmetry imposed
Descriptor: MAGNESIUM ION, Muzzle bound helix, Muzzle protein gp44, ...
Authors:Bayfield, O.W, Shkoporov, A.N, Yutin, N, Khokhlova, E.V, Smith, J.L.R, Hawkins, D.E.D.P, Koonin, E.V, Hill, C, Antson, A.A.
Deposit date:2021-12-24
Release date:2023-03-29
Last modified:2024-07-17
Method:ELECTRON MICROSCOPY (3.38 Å)
Cite:Structural atlas of a human gut crassvirus.
Nature, 617, 2023
7QOJ
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BU of 7qoj by Molmil
Tail barrel assembly of the phicrAss001 virion with C12 symmetry imposed
Descriptor: Cargo protein 1 gp45, MAGNESIUM ION, Portal protein gp20, ...
Authors:Bayfield, O.W, Shkoporov, A.N, Yutin, N, Khokhlova, E.V, Smith, J.L.R, Hawkins, D.E.D.P, Koonin, E.V, Hill, C, Antson, A.A.
Deposit date:2021-12-24
Release date:2023-03-29
Last modified:2023-05-24
Method:ELECTRON MICROSCOPY (3.21 Å)
Cite:Structural atlas of a human gut crassvirus.
Nature, 617, 2023
7QOL
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BU of 7qol by Molmil
Tail assembly of the phicrAss001 virion with C6 symmetry imposed
Descriptor: Cargo protein 1 gp45, MAGNESIUM ION, Muzzle bound helix, ...
Authors:Bayfield, O.W, Shkoporov, A.N, Yutin, N, Khokhlova, E.V, Smith, J.L.R, Hawkins, D.E.D.P, Koonin, E.V, Hill, C, Antson, A.A.
Deposit date:2021-12-24
Release date:2023-03-29
Last modified:2023-05-24
Method:ELECTRON MICROSCOPY (3.33 Å)
Cite:Structural atlas of a human gut crassvirus.
Nature, 617, 2023
7QOI
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BU of 7qoi by Molmil
Unique vertex of the phicrAss001 virion
Descriptor: Auxiliary capsid protein gp36, Cargo protein 1 gp45, Head fiber trimer protein gp21, ...
Authors:Bayfield, O.W, Shkoporov, A.N, Yutin, N, Khokhlova, E.V, Smith, J.L.R, Hawkins, D.E.D.P, Koonin, E.V, Hill, C, Antson, A.A.
Deposit date:2021-12-24
Release date:2023-03-29
Last modified:2024-10-16
Method:ELECTRON MICROSCOPY (3.62 Å)
Cite:Structural atlas of a human gut crassvirus.
Nature, 617, 2023

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PDB entries from 2024-10-30

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