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PDB: 16 results

1K98
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BU of 1k98 by Molmil
AdoMet complex of MetH C-terminal fragment
Descriptor: COBALAMIN, Methionine synthase, SULFATE ION
Authors:Bandarian, V, Pattridge, K.A, Lennon, B.W, Huddler, D.P, Matthews, R.G, Ludwig, M.L.
Deposit date:2001-10-27
Release date:2001-12-21
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (3.75 Å)
Cite:Domain alternation switches B(12)-dependent methionine synthase to the activation conformation.
Nat.Struct.Biol., 9, 2002
1K7Y
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BU of 1k7y by Molmil
E. coli MetH C-terminal fragment (649-1227)
Descriptor: COBALAMIN, SULFATE ION, methionine synthase
Authors:Bandarian, V, Pattridge, K.A, Lennon, B.W, Huddler, D.P, Matthews, R.G, Ludwig, M.L.
Deposit date:2001-10-22
Release date:2001-12-21
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (3 Å)
Cite:Domain alternation switches B(12)-dependent methionine synthase to the activation conformation.
Nat.Struct.Biol., 9, 2002
4NTM
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BU of 4ntm by Molmil
QueD soaked with sepiapterin (selenomethionine substituted protein)
Descriptor: (6R)-2-amino-4-oxo-3,4,5,6,7,8-hexahydropteridine-6-carboxylic acid, 6-carboxy-5,6,7,8-tetrahydropterin synthase, ZINC ION
Authors:Bandarian, V, Miles, Z.D, Roberts, S.A.
Deposit date:2013-12-02
Release date:2014-07-16
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Biochemical and Structural Studies of 6-Carboxy-5,6,7,8-tetrahydropterin Synthase Reveal the Molecular Basis of Catalytic Promiscuity within the Tunnel-fold Superfamily.
J.Biol.Chem., 289, 2014
4NTK
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QueD from E. coli
Descriptor: 2-amino-6-[(1Z)-1,2-dihydroxyprop-1-en-1-yl]-7,8-dihydropteridin-4(3H)-one, 6-carboxy-5,6,7,8-tetrahydropterin synthase, ACETATE ION, ...
Authors:Bandarian, V, Roberts, S.A, Miles, Z.D.
Deposit date:2013-12-02
Release date:2014-07-16
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Biochemical and Structural Studies of 6-Carboxy-5,6,7,8-tetrahydropterin Synthase Reveal the Molecular Basis of Catalytic Promiscuity within the Tunnel-fold Superfamily.
J.Biol.Chem., 289, 2014
4NTN
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BU of 4ntn by Molmil
E.coli QueD, SeMet protein, 2A resolution
Descriptor: 6-carboxy-5,6,7,8-tetrahydropterin synthase, FORMIC ACID, ZINC ION
Authors:Bandarian, V, Roberts, S.A, Miles, Z.D.
Deposit date:2013-12-02
Release date:2014-07-16
Last modified:2017-11-22
Method:X-RAY DIFFRACTION (1.99 Å)
Cite:Biochemical and Structural Studies of 6-Carboxy-5,6,7,8-tetrahydropterin Synthase Reveal the Molecular Basis of Catalytic Promiscuity within the Tunnel-fold Superfamily.
J.Biol.Chem., 289, 2014
4NJI
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BU of 4nji by Molmil
Crystal Structure of QueE from Burkholderia multivorans in complex with AdoMet, 6-carboxy-5,6,7,8-tetrahydropterin, and Mg2+
Descriptor: (6R)-2-amino-4-oxo-3,4,5,6,7,8-hexahydropteridine-6-carboxylic acid, 7-carboxy-7-deazaguanine synthase, IRON/SULFUR CLUSTER, ...
Authors:Dowling, D.P, Bruender, N.A, Young, A.P, McCarty, R.M, Bandarian, V, Drennan, C.L.
Deposit date:2013-11-10
Release date:2013-12-25
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.197 Å)
Cite:Radical SAM enzyme QueE defines a new minimal core fold and metal-dependent mechanism.
Nat.Chem.Biol., 10, 2014
4NJH
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BU of 4njh by Molmil
Crystal Structure of QueE from Burkholderia multivorans in complex with AdoMet and 6-carboxy-5,6,7,8-tetrahydropterin
Descriptor: (6R)-2-amino-4-oxo-3,4,5,6,7,8-hexahydropteridine-6-carboxylic acid, 7-carboxy-7-deazaguanine synthase, IRON/SULFUR CLUSTER, ...
Authors:Dowling, D.P, Bruender, N.A, Young, A.P, McCarty, R.M, Bandarian, V, Drennan, C.L.
Deposit date:2013-11-10
Release date:2013-12-25
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.898 Å)
Cite:Radical SAM enzyme QueE defines a new minimal core fold and metal-dependent mechanism.
Nat.Chem.Biol., 10, 2014
3D7J
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BU of 3d7j by Molmil
SCO6650, a 6-pyruvoyltetrahydropterin synthase homolog from Streptomyces coelicolor
Descriptor: CHLORIDE ION, SODIUM ION, Uncharacterized protein SCO6650
Authors:Spoonamore, J.E, Roberts, S.A, Heroux, A, Bandarian, V.
Deposit date:2008-05-21
Release date:2008-10-21
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Structure of a 6-pyruvoyltetrahydropterin synthase homolog from Streptomyces coelicolor.
Acta Crystallogr.,Sect.F, 64, 2008
2QV6
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BU of 2qv6 by Molmil
GTP cyclohydrolase III from M. jannaschii (MJ0145) complexed with GTP and metal ions
Descriptor: CALCIUM ION, GTP cyclohydrolase III, GUANOSINE-5'-TRIPHOSPHATE, ...
Authors:Roberts, S.A, Bandarian, V.
Deposit date:2007-08-07
Release date:2008-01-15
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2 Å)
Cite:A New Use for a Familiar Fold: The X-ray Crystal Structure of GTP-Bound GTP Cyclohydrolase III from Methanocaldococcus jannaschii Reveals a Two Metal Ion Catalytic Mechanism
Biochemistry, 47, 2008
5T8Y
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BU of 5t8y by Molmil
Structure of epoxyqueuosine reductase from Bacillus subtilis with the Asp134 catalytic loop swung out of the active site.
Descriptor: COBALAMIN, Epoxyqueuosine reductase, IRON/SULFUR CLUSTER, ...
Authors:Dowling, D.P, Miles, Z.D, Kohrer, C, Maiocco, S.J, Elliott, S.J, Bandarian, V, Drennan, C.L.
Deposit date:2016-09-08
Release date:2016-09-28
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.653 Å)
Cite:Molecular basis of cobalamin-dependent RNA modification.
Nucleic Acids Res., 44, 2016
5D08
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BU of 5d08 by Molmil
Crystal structure of selenomethionine-labeled epoxyqueuosine reductase
Descriptor: CHLORIDE ION, COBALAMIN, Epoxyqueuosine reductase, ...
Authors:Dowling, D.P, Miles, Z.D, Kohrer, C, Bandarian, V, Drennan, C.L.
Deposit date:2015-08-02
Release date:2016-09-28
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (1.747 Å)
Cite:Molecular basis of cobalamin-dependent RNA modification.
Nucleic Acids Res., 44, 2016
5D0B
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BU of 5d0b by Molmil
Crystal structure of epoxyqueuosine reductase with a tRNA-TYR epoxyqueuosine-modified tRNA stem loop
Descriptor: COBALAMIN, Epoxyqueuosine reductase, GLYCEROL, ...
Authors:Dowling, D.P, Miles, Z.D, Kohrer, C, Bandarian, V, Drennan, C.L.
Deposit date:2015-08-03
Release date:2016-09-28
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.645 Å)
Cite:Molecular basis of cobalamin-dependent RNA modification.
Nucleic Acids Res., 44, 2016
5D0A
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BU of 5d0a by Molmil
Crystal structure of epoxyqueuosine reductase with cleaved RNA stem loop
Descriptor: COBALAMIN, Epoxyqueuosine reductase, GLYCEROL, ...
Authors:Dowling, D.P, Miles, Z.D, Kohrer, C, Bandarian, V, Drennan, C.L.
Deposit date:2015-08-03
Release date:2016-09-28
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Molecular basis of cobalamin-dependent RNA modification.
Nucleic Acids Res., 44, 2016
4NJG
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BU of 4njg by Molmil
Crystal Structure of QueE from Burkholderia multivorans in complex with AdoMet and 6-carboxypterin
Descriptor: 6-CARBOXYPTERIN, 7-carboxy-7-deazaguanine synthase, IRON/SULFUR CLUSTER, ...
Authors:Dowling, D.P, Bruender, N.A, Young, A.P, McCarty, R.M, Bandarian, V, Drennan, C.L.
Deposit date:2013-11-10
Release date:2013-12-25
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.598 Å)
Cite:Radical SAM enzyme QueE defines a new minimal core fold and metal-dependent mechanism.
Nat.Chem.Biol., 10, 2014
4NJK
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BU of 4njk by Molmil
Crystal Structure of QueE from Burkholderia multivorans in complex with AdoMet, 7-carboxy-7-deazaguanine, and Mg2+
Descriptor: 2-amino-4-oxo-4,7-dihydro-3H-pyrrolo[2,3-d]pyrimidine-5-carboxylic acid, 7-carboxy-7-deazaguanine synthase, IRON/SULFUR CLUSTER, ...
Authors:Dowling, D.P, Bruender, N.A, Young, A.P, McCarty, R.M, Bandarian, V, Drennan, C.L.
Deposit date:2013-11-10
Release date:2013-12-25
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.911 Å)
Cite:Radical SAM enzyme QueE defines a new minimal core fold and metal-dependent mechanism.
Nat.Chem.Biol., 10, 2014
4NJJ
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BU of 4njj by Molmil
Crystal Structure of QueE from Burkholderia multivorans in complex with AdoMet, 6-carboxy-5,6,7,8-tetrahydropterin, and Manganese(II)
Descriptor: (6R)-2-amino-4-oxo-3,4,5,6,7,8-hexahydropteridine-6-carboxylic acid, 7-carboxy-7-deazaguanine synthase, IRON/SULFUR CLUSTER, ...
Authors:Dowling, D.P, Bruender, N.A, Young, A.P, McCarty, R.M, Bandarian, V, Drennan, C.L.
Deposit date:2013-11-10
Release date:2013-12-25
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Radical SAM enzyme QueE defines a new minimal core fold and metal-dependent mechanism.
Nat.Chem.Biol., 10, 2014

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