Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 15282 results

8E1I
DownloadVisualize
BU of 8e1i by Molmil
Asp1 kinase in complex with ATP Mg 5-IP7
Descriptor: (1r,2R,3S,4s,5R,6S)-2,3,4,5,6-pentakis(phosphonooxy)cyclohexyl trihydrogen diphosphate, ADENOSINE-5'-TRIPHOSPHATE, Inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase, ...
Authors:Goldgur, Y, Shuman, S, Benjamin, B.
Deposit date:2022-08-10
Release date:2022-11-30
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structures of Fission Yeast Inositol Pyrophosphate Kinase Asp1 in Ligand-Free, Substrate-Bound, and Product-Bound States.
Mbio, 13, 2022
8E1S
DownloadVisualize
BU of 8e1s by Molmil
Asp1 kinase in complex with ADPNP Mn IP6
Descriptor: INOSITOL HEXAKISPHOSPHATE, Inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase, MANGANESE (II) ION, ...
Authors:Goldgur, Y, Shuman, S, Benjamin, B.
Deposit date:2022-08-11
Release date:2022-11-30
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.72 Å)
Cite:Structures of Fission Yeast Inositol Pyrophosphate Kinase Asp1 in Ligand-Free, Substrate-Bound, and Product-Bound States.
Mbio, 13, 2022
8E1T
DownloadVisualize
BU of 8e1t by Molmil
Asp1 kinase in complex with ADPNP Mg IP7
Descriptor: (1r,2R,3S,4s,5R,6S)-2,3,4,5,6-pentakis(phosphonooxy)cyclohexyl trihydrogen diphosphate, Inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase, MAGNESIUM ION, ...
Authors:Goldgur, Y, Shuman, S, Benjamin, B.
Deposit date:2022-08-11
Release date:2022-11-30
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.71 Å)
Cite:Structures of Fission Yeast Inositol Pyrophosphate Kinase Asp1 in Ligand-Free, Substrate-Bound, and Product-Bound States.
Mbio, 13, 2022
8E1V
DownloadVisualize
BU of 8e1v by Molmil
Asp1 kinase in complex with ADPNP Mg IP6
Descriptor: INOSITOL HEXAKISPHOSPHATE, Inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase, MAGNESIUM ION, ...
Authors:Goldgur, Y, Shuman, S, Benjamin, B.
Deposit date:2022-08-11
Release date:2022-11-30
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structures of Fission Yeast Inositol Pyrophosphate Kinase Asp1 in Ligand-Free, Substrate-Bound, and Product-Bound States.
Mbio, 13, 2022
8E1J
DownloadVisualize
BU of 8e1j by Molmil
Asp1 kinase in complex with 1,5-IP8
Descriptor: (1R,3S,4R,5S,6R)-2,4,5,6-tetrakis(phosphonooxy)cyclohexane-1,3-diyl bis[trihydrogen (diphosphate)], Inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase
Authors:Goldgur, Y, Shuman, S, Benjamin, B.
Deposit date:2022-08-10
Release date:2022-11-30
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structures of Fission Yeast Inositol Pyrophosphate Kinase Asp1 in Ligand-Free, Substrate-Bound, and Product-Bound States.
Mbio, 13, 2022
1HHO
DownloadVisualize
BU of 1hho by Molmil
STRUCTURE OF HUMAN OXYHAEMOGLOBIN AT 2.1 ANGSTROMS RESOLUTION
Descriptor: HEMOGLOBIN A (OXY) (ALPHA CHAIN), HEMOGLOBIN A (OXY) (BETA CHAIN), OXYGEN MOLECULE, ...
Authors:Shaanan, B.
Deposit date:1983-06-10
Release date:1983-10-27
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structure of human oxyhaemoglobin at 2.1 A resolution.
J.Mol.Biol., 171, 1983
4V2U
DownloadVisualize
BU of 4v2u by Molmil
Apo-structure of alpha2,3-sialyltransferase from Pasteurella dagmatis
Descriptor: SIALYLTRANSFERASE
Authors:Pavkov-Keller, T, Schmoelzer, K, Czabany, T, Luley-Goedl, C, Ribitsch, D, Schwab, H, Nidetzky, B, Gruber, K.
Deposit date:2014-10-15
Release date:2015-04-08
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.71 Å)
Cite:Complete Switch from Alpha2,3- to Alpha2,6-Regioselectivity in Pasteurella Dagmatis Beta-D-Galactoside Sialyltransferase by Active-Site Redesign
Chem.Commun.(Camb.), 51, 2015
4V0I
DownloadVisualize
BU of 4v0i by Molmil
Water Network Determines Selectivity for a Series of Pyrimidone Indoline Amide PI3KBeta Inhibitors over PI3K-Delta
Descriptor: 2-[2-(2-METHYL-2,3-DIHYDRO-INDOL-1-YL)-2-OXO-ETHYL]-6-MORPHOLIN-4-YL-3H-PYRIMIDIN-4-ONE, PHOSPHATIDYLINOSITOL-4,5-BISPHOSPHATE 3-KINASE CATALYTIC SUBUNIT DELTA ISOFORM
Authors:Robinson, D, Bertrand, T, Carry, J.C, Halley, F, Karlsson, A, Mathieu, M, Minoux, H, Perrin, M.A, Robert, B, Schio, L, Sherman, W.
Deposit date:2014-09-16
Release date:2015-09-30
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.54 Å)
Cite:Differential Water Thermodynamics Determine Pi3K-Beta/Delta Selectivity for Solvent-Exposed Ligand Modifications.
J.Chem.Inf.Model., 56, 2016
4W82
DownloadVisualize
BU of 4w82 by Molmil
Enoyl-acyl carrier protein-reductase domain from human fatty acid synthase
Descriptor: CHLORIDE ION, Fatty acid synthase, MAGNESIUM ION, ...
Authors:Sippel, K.H, Vyas, N.K, Sankaran, B, Quiocho, F.A.
Deposit date:2014-08-22
Release date:2014-10-15
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystal structure of the human Fatty Acid synthase enoyl-acyl carrier protein-reductase domain complexed with triclosan reveals allosteric protein-protein interface inhibition.
J.Biol.Chem., 289, 2014
4V4Y
DownloadVisualize
BU of 4v4y by Molmil
Crystal structure of the 70S Thermus thermophilus ribosome with translocated and rotated Shine-Dalgarno Duplex.
Descriptor: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ...
Authors:Jenner, L, Yusupova, G, Rees, B, Moras, D, Yusupov, M.
Deposit date:2006-06-27
Release date:2014-07-09
Last modified:2017-11-22
Method:X-RAY DIFFRACTION (5.5 Å)
Cite:Structural basis for messenger RNA movement on the ribosome.
Nature, 444, 2006
4URE
DownloadVisualize
BU of 4ure by Molmil
Molecular Genetic and Crystal Structural Analysis of 1-(4- Hydroxyphenyl)-Ethanol Dehydrogenase from Aromatoleum aromaticum EbN1
Descriptor: 3-PYRIDINIUM-1-YLPROPANE-1-SULFONATE, ACETATE ION, CYCLOHEXANOL DEHYDROGENASE, ...
Authors:Buesing, I, Hoeffken, H.W, Breuer, M, Woehlbrand, L, Hauer, B, Rabus, R.
Deposit date:2014-06-28
Release date:2015-07-08
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Molecular Genetic and Crystal Structural Analysis of 1-(4-Hydroxyphenyl)-Ethanol Dehydrogenase from 'Aromatoleum Aromaticum' Ebn1.
J.Mol.Microbiol.Biotechnol., 25, 2015
4UXA
DownloadVisualize
BU of 4uxa by Molmil
Improved variant of (R)-selective manganese-dependent hydroxynitrile lyase from bacteria
Descriptor: CUPIN 2 CONSERVED BARREL DOMAIN PROTEIN, MANGANESE (II) ION
Authors:Pavkov-Keller, T, Wiedner, R, Kothbauer, B, Gruber-Khadjawi, M, Schwab, H, Steiner, K, Gruber, K.
Deposit date:2014-08-21
Release date:2015-01-21
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Improving the Properties of Bacterial R-Selective Hydroxynitrile Lyases for Industrial Applications
Chemcatchem, 2015
1H96
DownloadVisualize
BU of 1h96 by Molmil
recombinant mouse L-chain ferritin
Descriptor: CADMIUM ION, FERRITIN LIGHT CHAIN 1, SULFATE ION
Authors:Granier, T, Gallois, B, D'Estaintot, B.L, Dautant, A, Chevalier, J.M, Mellado, J.M, Beaumont, C, Santambrogio, P, Arosio, P, Precigoux, G.
Deposit date:2001-02-28
Release date:2001-03-06
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structure of Mouse L-Chain Ferritin at 1.6 A Resolution
Acta Crystallogr.,Sect.D, 57, 2001
4V4D
DownloadVisualize
BU of 4v4d by Molmil
Crystal Structure of Pyrogallol-Phloroglucinol Transhydroxylase from Pelobacter acidigallici complexed with pyrogallol
Descriptor: 2-AMINO-5,6-DIMERCAPTO-7-METHYL-3,7,8A,9-TETRAHYDRO-8-OXA-1,3,9,10-TETRAAZA-ANTHRACEN-4-ONE GUANOSINE DINUCLEOTIDE, BENZENE-1,2,3-TRIOL, CALCIUM ION, ...
Authors:Messerschmidt, A, Niessen, H, Abt, D, Einsle, O, Schink, B, Kroneck, P.M.H.
Deposit date:2004-06-02
Release date:2014-07-09
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structure of pyrogallol-phloroglucinol transhydroxylase, an Mo enzyme capable of intermolecular hydroxyl transfer between phenols
PROC.NATL.ACAD.SCI.USA, 101, 2004
4V4Z
DownloadVisualize
BU of 4v4z by Molmil
70S Thermus thermophilous ribosome functional complex with mRNA and E- and P-site tRNAs at 4.5A.
Descriptor: 16S rRNA, 23S rRNA, 30S ribosomal protein S10, ...
Authors:Jenner, L, Yusupova, G, Rees, B, Moras, D, Yusupov, M.
Deposit date:2006-06-27
Release date:2014-07-09
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (4.51 Å)
Cite:Structural basis for messenger RNA movement on the ribosome.
Nature, 444, 2006
4URD
DownloadVisualize
BU of 4urd by Molmil
Cryo-EM map of Trigger Factor bound to a translating ribosome
Descriptor: TRIGGER FACTOR
Authors:Deeng, J, Chan, K.Y, van der Sluis, E, Bischoff, L, Berninghausen, O, Han, W, Gumbart, J, Schulten, K, Beatrix, B, Beckmann, R.
Deposit date:2014-06-27
Release date:2016-01-13
Last modified:2024-05-08
Method:ELECTRON MICROSCOPY (7.7 Å)
Cite:Dynamic Behavior of Trigger Factor on the Ribosome.
J.Mol.Biol., 428, 2016
4UTP
DownloadVisualize
BU of 4utp by Molmil
Crystal structure of pneumococcal surface antigen PsaA in the Cd- bound, closed state
Descriptor: CADMIUM ION, MANGANESE ABC TRANSPORTER SUBSTRATE-BINDING LIPOPROTEIN
Authors:Luo, Z, Counago, R.M, Maher, M, Kobe, B.
Deposit date:2014-07-22
Release date:2014-08-13
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2 Å)
Cite:Dysregulation of transition metal ion homeostasis is the molecular basis for cadmium toxicity in Streptococcus pneumoniae.
Nat Commun, 6, 2015
4V5V
DownloadVisualize
BU of 4v5v by Molmil
Structure of respiratory syncytial virus nucleocapsid protein, P1 crystal form
Descriptor: RESPIRATORY SYNCYTIAL VIRUS NUCLEOCAPSID PROTEIN, RNA
Authors:El Omari, K, Dhaliwal, B, Ren, J, Abrescia, N.G.A, Lockyer, M, Powell, K.L, Hawkins, A.R, Stammers, D.K.
Deposit date:2011-05-04
Release date:2014-07-09
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (3.6 Å)
Cite:Structures of Respiratory Syncytial Virus Nucleocapsid Protein from Two Crystal Forms: Details of Potential Packing Interactions in the Native Helical Form.
Acta Crystallogr.,Sect.F, 67, 2011
4W7I
DownloadVisualize
BU of 4w7i by Molmil
Crystal structure of DEH reductase A1-R' mutant
Descriptor: 4-deoxy-L-erythro-5-hexoseulose uronate reductase A1-R'
Authors:Takase, R, Mikami, B, Kawai, S, Murata, K, Hashimoto, W.
Deposit date:2014-08-22
Release date:2014-09-24
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.98 Å)
Cite:Structure-based Conversion of the Coenzyme Requirement of a Short-chain Dehydrogenase/Reductase Involved in Bacterial Alginate Metabolism.
J.Biol.Chem., 289, 2014
4W7S
DownloadVisualize
BU of 4w7s by Molmil
Crystal structure of the yeast DEAD-box splicing factor Prp28 at 2.54 Angstroms resolution
Descriptor: GLYCEROL, HEXAETHYLENE GLYCOL, MAGNESIUM ION, ...
Authors:Jacewicz, A, Smith, P, Schwer, B, Shuman, S.
Deposit date:2014-08-22
Release date:2014-10-29
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (2.542 Å)
Cite:Crystal structure, mutational analysis and RNA-dependent ATPase activity of the yeast DEAD-box pre-mRNA splicing factor Prp28.
Nucleic Acids Res., 42, 2014
6L2Q
DownloadVisualize
BU of 6l2q by Molmil
Threonyl-tRNA synthetase from Salmonella enterica in complex with an inhibitor
Descriptor: (2S,3R)-2-azanyl-N-[(E)-4-[6,7-bis(chloranyl)-4-oxidanylidene-quinazolin-3-yl]but-2-enyl]-3-oxidanyl-butanamide, 1,2-ETHANEDIOL, Threonine--tRNA ligase, ...
Authors:Guo, J, Chen, B, Zhou, H.
Deposit date:2019-10-05
Release date:2020-01-15
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Discovery of novel tRNA-amino acid dual-site inhibitors against threonyl-tRNA synthetase by fragment-based target hopping.
Eur.J.Med.Chem., 187, 2019
4UTO
DownloadVisualize
BU of 4uto by Molmil
Crystal structure of pneumococcal surface antigen PsaA D280N in the Cd-bound, open state
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, CADMIUM ION, MANGANESE ABC TRANSPORTER SUBSTRATE-BINDING LIPOPROTEIN
Authors:Luo, Z, Counago, R.M, Maher, M, Kobe, B.
Deposit date:2014-07-22
Release date:2015-03-11
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Dysregulation of transition metal ion homeostasis is the molecular basis for cadmium toxicity in Streptococcus pneumoniae.
Nat Commun, 6, 2015
4V66
DownloadVisualize
BU of 4v66 by Molmil
Structure of the E. coli ribosome and the tRNAs in Post-accommodation state
Descriptor: 16S rRNA, 23S rRNA, 30S ribosomal protein S10, ...
Authors:Devkota, B, Caulfield, T.R, Tan, R.-Z, Harvey, S.C.
Deposit date:2008-08-03
Release date:2014-07-09
Last modified:2024-02-28
Method:ELECTRON MICROSCOPY (9 Å)
Cite:The Structure of the E. coli Ribosome Before and After Accommodation: Implications for Proofreading
To be Published
1HOY
DownloadVisualize
BU of 1hoy by Molmil
NMR STRUCTURE OF THE COMPLEX BETWEEN A-BUNGAROTOXIN AND A MIMOTOPE OF THE NICOTINIC ACETYLCHOLINE RECEPTOR
Descriptor: LONG NEUROTOXIN 1, MIMOTOPE OF THE NICOTINIC ACETYLCHOLINE RECEPTOR
Authors:Scarselli, M, Spiga, O, Ciutti, A, Bracci, L, Lelli, B, Lozzi, L, Calamandrei, D, Bernini, A, Di Maro, D, Niccolai, N, Neri, P.
Deposit date:2000-12-12
Release date:2000-12-27
Last modified:2022-02-23
Method:SOLUTION NMR
Cite:NMR structure of alpha-bungarotoxin free and bound to a mimotope of the nicotinic acetylcholine receptor.
Biochemistry, 41, 2002
6L0L
DownloadVisualize
BU of 6l0l by Molmil
Hydra-1ubq de nova designed by Hydra based on ubiquitin
Descriptor: Hydra-1ubq
Authors:Ouyang, B.
Deposit date:2019-09-26
Release date:2020-09-30
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Multiobjective heuristic algorithm for de novo protein design in a quantified continuous sequence space.
Comput Struct Biotechnol J, 19, 2021

226707

건을2024-10-30부터공개중

PDB statisticsPDBj update infoContact PDBjnumon