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PDB: 532 件
1BFG
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BU of 1bfg by Molmil
CRYSTAL STRUCTURE OF BASIC FIBROBLAST GROWTH FACTOR AT 1.6 ANGSTROMS RESOLUTION
分子名称: BASIC FIBROBLAST GROWTH FACTOR
著者Kitagawa, Y, Ago, H, Katsube, Y, Fujishima, A, Matsuura, Y.
登録日1993-04-15
公開日1994-01-31
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Crystal structure of basic fibroblast growth factor at 1.6 A resolution.
J.Biochem.(Tokyo), 110, 1991
3VSN
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BU of 3vsn by Molmil
The crystal structure of novel chondroition lyase ODV-E66, baculovirus envelope protein
分子名称: GLYCEROL, IODIDE ION, Occlusion-derived virus envelope protein E66
著者Kawaguchi, Y, Sugiura, N, Kimata, K, Kimura, M, Kakuta, Y.
登録日2012-04-27
公開日2013-05-22
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献The crystal structure of novel chondroition lyase ODV-E66, baculovirus envelope protein
To be Published
3WUQ
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BU of 3wuq by Molmil
Structure of the entire stalk region of the dynein motor domain
分子名称: Cytoplasmic dynein 1 heavy chain 1
著者Nishikawa, Y, Oyama, T, Kamiya, N, Kon, T, Toyoshima, Y.Y, Nakamura, H, Kurisu, G.
登録日2014-05-01
公開日2014-08-06
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (3.5 Å)
主引用文献Structure of the entire stalk region of the Dynein motor domain
J.Mol.Biol., 426, 2014
3WKR
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BU of 3wkr by Molmil
Crystal structure of the SepCysS-SepCysE complex from Methanocaldococcus jannaschii
分子名称: O-phospho-L-seryl-tRNA:Cys-tRNA synthase, Uncharacterized protein MJ1481
著者Nakazawa, Y, Asano, N, Nakamura, A, Yao, M.
登録日2013-10-30
公開日2014-07-16
最終更新日2022-08-24
実験手法X-RAY DIFFRACTION (2.803 Å)
主引用文献Ancient translation factor is essential for tRNA-dependent cysteine biosynthesis in methanogenic archaea.
Proc.Natl.Acad.Sci.USA, 111, 2014
3WKS
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BU of 3wks by Molmil
Crystal structure of the SepCysS-SepCysE N-terminal domain complex from
分子名称: O-phospho-L-seryl-tRNA:Cys-tRNA synthase, Uncharacterized protein MJ1481
著者Nakazawa, Y, Asano, N, Nakamura, A, Yao, M.
登録日2013-10-30
公開日2014-07-30
最終更新日2022-08-24
実験手法X-RAY DIFFRACTION (3.029 Å)
主引用文献Ancient translation factor is essential for tRNA-dependent cysteine biosynthesis in methanogenic archaea.
Proc.Natl.Acad.Sci.USA, 111, 2014
2RSE
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BU of 2rse by Molmil
NMR structure of FKBP12-mTOR FRB domain-rapamycin complex structure determined based on PCS
分子名称: Peptidyl-prolyl cis-trans isomerase FKBP1A, Serine/threonine-protein kinase mTOR, TERBIUM(III) ION
著者Kobashigawa, Y, Ushio, M, Saio, T, Inagaki, F.
登録日2012-01-25
公開日2012-05-30
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Convenient method for resolving degeneracies due to symmetry of the magnetic susceptibility tensor and its application to pseudo contact shift-based protein-protein complex structure determination.
J.Biomol.Nmr, 53, 2012
5ZLQ
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BU of 5zlq by Molmil
Crystal Structure of C1orf123
分子名称: UPF0587 protein C1orf123, ZINC ION
著者Furukawa, Y, Lim, C.T, Tosha, T.
登録日2018-03-29
公開日2018-10-10
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Identification of a novel zinc-binding protein, C1orf123, as an interactor with a heavy metal-associated domain
PLoS ONE, 13, 2018
6AI2
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BU of 6ai2 by Molmil
Structure of the 328-692 fragment of FlhA (F459A)
分子名称: Flagellar biosynthesis protein FlhA
著者Ogawa, Y, Kinoshita, M, Minamino, T, Imada, K.
登録日2018-08-21
公開日2019-03-20
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (3.3 Å)
主引用文献Structural Insights into the Substrate Specificity Switch Mechanism of the Type III Protein Export Apparatus.
Structure, 27, 2019
6AI1
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BU of 6ai1 by Molmil
Structure of the 328-692 fragment of FlhA (D456V)
分子名称: Flagellar biosynthesis protein FlhA
著者Ogawa, Y, Kinoshita, M, Minamino, T, Imada, K.
登録日2018-08-21
公開日2019-03-20
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (3.5 Å)
主引用文献Structural Insights into the Substrate Specificity Switch Mechanism of the Type III Protein Export Apparatus.
Structure, 27, 2019
2KFK
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BU of 2kfk by Molmil
Solution structure of Bem1p PB1 domain complexed with Cdc24p PB1 domain
分子名称: Bud emergence protein 1, Cell division control protein 24
著者Kobashigawa, Y, Yoshinaga, S, Tandai, T, Ogura, K, Inagaki, F.
登録日2009-02-23
公開日2009-10-06
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献NMR structure of the heterodimer of Bem1 and Cdc24 PB1 domains from Saccharomyces cerevisiae
J.Biochem., 146, 2009
6K9J
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BU of 6k9j by Molmil
0.98 A three-dimensional structure of horse heart cytochrome C at 110K
分子名称: Cytochrome c, HEME C
著者Sugawara, Y, Endo, S.
登録日2019-06-16
公開日2020-06-17
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (0.98 Å)
主引用文献0.98 A three-dimensional structure of horse heart cytochrome C at 110K
To Be Published
6K9I
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BU of 6k9i by Molmil
High-resolution three-dimensional structure of horse heart cytochrome C at room temperature
分子名称: Cytochrome c, HEME C
著者Sugawara, Y, Endo, S.
登録日2019-06-16
公開日2020-06-17
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献High-resolution three-dimensional structure of horse heart cytochrome C
To Be Published
6KBR
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BU of 6kbr by Molmil
Crystal structure of Human KLK4 and SPINK2 derived KLK4 inhibitor complex
分子名称: GLYCEROL, K41043, Kallikrein-4
著者Kawaguchi, Y, Nishimiya, D.
登録日2019-06-26
公開日2019-07-17
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献A protein scaffold, engineered SPINK2, for generation of inhibitors with high affinity and specificity against target proteases.
Sci Rep, 9, 2019
7W86
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BU of 7w86 by Molmil
Crystal structure of the DYW domain of DYW1
分子名称: 1,2-ETHANEDIOL, ACETATE ION, GLYCEROL, ...
著者Sawada, Y, Shimizu, H, Toma-Fukai, S, Shimizu, T.
登録日2021-12-07
公開日2022-12-14
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structural insight into the activation of an Arabidopsis organellar C-to-U RNA editing enzyme by active site complementation.
Plant Cell, 35, 2023
1ARB
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BU of 1arb by Molmil
THE PRIMARY STRUCTURE AND STRUCTURAL CHARACTERISTICS OF ACHROMOBACTER LYTICUS PROTEASE I, A LYSINE-SPECIFIC SERINE PROTEASE
分子名称: ACHROMOBACTER PROTEASE I
著者Kitagawa, Y, Katsube, Y.
登録日1993-04-15
公開日1993-10-31
最終更新日2024-06-05
実験手法X-RAY DIFFRACTION (1.2 Å)
主引用文献The primary structure and structural characteristics of Achromobacter lyticus protease I, a lysine-specific serine protease.
J.Biol.Chem., 264, 1989
1ARC
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BU of 1arc by Molmil
THE PRIMARY STRUCTURE AND STRUCTURAL CHARACTERISTICS OF ACHROMOBACTER LYTICUS PROTEASE I, A LYSINE-SPECIFIC SERINE PROTEASE
分子名称: ACHROMOBACTER PROTEASE I, N-[(1S)-5-amino-1-(chloroacetyl)pentyl]-4-methylbenzenesulfonamide
著者Kitagawa, Y, Katsube, Y.
登録日1993-04-15
公開日1993-10-31
最終更新日2024-06-05
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献The primary structure and structural characteristics of Achromobacter lyticus protease I, a lysine-specific serine protease.
J.Biol.Chem., 264, 1989
3VGO
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BU of 3vgo by Molmil
Crystal structure of the N-terminal fragment of Cbl-b
分子名称: E3 ubiquitin-protein ligase CBL-B
著者Kobashigawa, Y, Noda, N.N, Inagaki, F.
登録日2011-08-18
公開日2011-12-14
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (3.1 Å)
主引用文献Autoinhibition and phosphorylation-induced activation mechanisms of human cancer and autoimmune disease-related E3 protein Cbl-b
Proc.Natl.Acad.Sci.USA, 108, 2011
3WVX
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BU of 3wvx by Molmil
Structure of D48A hen egg white lysozyme
分子名称: Lysozyme C
著者Kawaguchi, Y, Yoneda, K, Araki, T.
登録日2014-06-10
公開日2015-06-10
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.58 Å)
主引用文献The role of Asp48 in the hydrogen bonding network involving Asp52 of hen egg white lysozyme
TO BE PUBLISHED
3WVY
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BU of 3wvy by Molmil
Structure of D48A hen egg white lysozyme in complex with (GlcNAc)4
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Lysozyme C
著者Kawaguchi, Y, Yoneda, K, Araki, T.
登録日2014-06-11
公開日2015-06-10
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.56 Å)
主引用文献The role of Asp48 in the hydrogen bonding network involving Asp52 of hen egg white lysozyme
TO BE PUBLISHED
3WYH
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BU of 3wyh by Molmil
Structure of disulfide bond deletion mutant of ostrich egg white lysozyme
分子名称: HEXAETHYLENE GLYCOL, Lysozyme g, TRIS(HYDROXYETHYL)AMINOMETHANE
著者Kawaguchi, Y, Yoneda, K, Araki, T.
登録日2014-08-28
公開日2014-10-15
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.77 Å)
主引用文献Structure of disulfide bond deletion mutant of ostrich egg white lysozyme
To be Published
1I56
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BU of 1i56 by Molmil
SOLUTION STRUCTURE OF CA2+-BOUND STATE OF CANINE MILK LYSOZYME
分子名称: LYSOZYME C
著者Kobashigawa, Y, Tsuda, S, Nitta, K.
登録日2001-02-25
公開日2002-02-27
最終更新日2022-02-23
実験手法SOLUTION NMR
主引用文献Solution structure of Ca2+-bound state of canine milk lysozyme
To be Published
7VZ4
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BU of 7vz4 by Molmil
Cryo-EM structure of human nucleosome core particle composed of the Widom 601L DNA sequence
分子名称: DNA (145-MER), Histone H2A type 1-B/E, Histone H2B type 1-J, ...
著者Takizawa, Y, Ho, C.-H, Sato, S, Danev, R, Kurumizaka, H.
登録日2021-11-15
公開日2023-05-17
最終更新日2024-06-26
実験手法ELECTRON MICROSCOPY (1.89 Å)
主引用文献Methods for High Resolution Cryo-EM Analyses of Nucleosomes
To Be Published
1SRD
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BU of 1srd by Molmil
Three-dimensional structure of CU,ZN-superoxide dismutase from spinach at 2.0 Angstroms resolution
分子名称: COPPER (II) ION, COPPER,ZINC SUPEROXIDE DISMUTASE, ZINC ION
著者Kitagawa, Y, Katsube, Y.
登録日1993-04-15
公開日1994-01-31
最終更新日2024-06-05
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Three-dimensional structure of Cu,Zn-superoxide dismutase from spinach at 2.0 A resolution.
J.Biochem.(Tokyo), 109, 1991
1ULI
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BU of 1uli by Molmil
Biphenyl dioxygenase (BphA1A2) derived from Rhodococcus sp. strain RHA1
分子名称: FE (II) ION, FE2/S2 (INORGANIC) CLUSTER, biphenyl dioxygenase large subunit, ...
著者Furusawa, Y, Nagarajan, V, Masai, E, Tanokura, M, Fukuda, M, Senda, T.
登録日2003-09-12
公開日2004-09-28
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Crystal Structure of the Terminal Oxygenase Component of Biphenyl Dioxygenase Derived from Rhodococcus sp. Strain RHA1
J.Mol.Biol., 342, 2004
1ULJ
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BU of 1ulj by Molmil
Biphenyl dioxygenase (BphA1A2) in complex with the substrate
分子名称: BIPHENYL, FE (II) ION, FE2/S2 (INORGANIC) CLUSTER, ...
著者Furusawa, Y, Nagarajan, V, Masai, E, Tanokura, M, Fukuda, M, Senda, T.
登録日2003-09-12
公開日2004-09-28
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Crystal Structure of the Terminal Oxygenase Component of Biphenyl Dioxygenase Derived from Rhodococcus sp. Strain RHA1
J.Mol.Biol., 342, 2004

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