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PDB: 18 件

6JK5
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Ca2+-dependent type II antifreeze protein (Ca2+-free form)
分子名称: SULFATE ION, Type II antifreeze protein
著者Arai, T, Tsuda, S, Kondo, H, Nishimiya, Y.
登録日2019-02-27
公開日2019-06-26
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.25 Å)
主引用文献Calcium-Binding Generates the Semi-Clathrate Waters on a Type II Antifreeze Protein to Adsorb onto an Ice Crystal Surface.
Biomolecules, 9, 2019
6JK4
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Ca2+-dependent type II antifreeze protein
分子名称: CALCIUM ION, Type II antifreeze protein
著者Arai, T, Tsuda, S, Kondo, H, Nishimiya, Y.
登録日2019-02-27
公開日2019-06-26
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.06 Å)
主引用文献Calcium-Binding Generates the Semi-Clathrate Waters on a Type II Antifreeze Protein to Adsorb onto an Ice Crystal Surface.
Biomolecules, 9, 2019
7BWX
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Crystal structure of ice-binding protein from an Antarctic ascomycete, Antarctomyces psychrotrophicus.
分子名称: GLYCEROL, Ice-binding protein isoform1a, SULFATE ION
著者Yamauchi, A, Arai, T, Kondo, H, Tsuda, S.
登録日2020-04-16
公開日2020-05-27
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.904 Å)
主引用文献An Ice-Binding Protein from an Antarctic Ascomycete Is Fine-Tuned to Bind to Specific Water Molecules Located in the Ice Prism Planes.
Biomolecules, 10, 2020
7BWY
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Crystal structure of ice-binding protein from an Antarctic ascomycete, Antarctomyces psychrotrophicus.
分子名称: GLYCEROL, Ice-binding protein isoform1a
著者Yamauchi, A, Arai, T, Kondo, H, Tsuda, S.
登録日2020-04-16
公開日2020-05-27
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.02 Å)
主引用文献An Ice-Binding Protein from an Antarctic Ascomycete Is Fine-Tuned to Bind to Specific Water Molecules Located in the Ice Prism Planes.
Biomolecules, 10, 2020
4WD3
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Crystal structure of an L-amino acid ligase RizA
分子名称: L-amino acid ligase
著者Kagawa, W, Arai, T, Kino, K, Kurumizaka, H.
登録日2014-09-06
公開日2015-09-09
最終更新日2020-01-01
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Structure of RizA, an L-amino-acid ligase from Bacillus subtilis.
Acta Crystallogr.,Sect.F, 71, 2015
3OQJ
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Crystal structure of B. licheniformis CDPS yvmC-BLIC in complex with CAPSO
分子名称: (2S)-3-(cyclohexylamino)-2-hydroxypropane-1-sulfonic acid, Putative uncharacterized protein yvmC
著者Bonnefond, L, Arai, T, Suzuki, T, Ishitani, R, Nureki, O.
登録日2010-09-03
公開日2011-02-23
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.399 Å)
主引用文献Structural basis for nonribosomal peptide synthesis by an aminoacyl-tRNA synthetase paralog.
Proc.Natl.Acad.Sci.USA, 108, 2011
3OQI
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Crystal structure of B. licheniformis CDPS yvmC-BLIC in complex with CHES
分子名称: 2-[N-CYCLOHEXYLAMINO]ETHANE SULFONIC ACID, GLYCEROL, Putative uncharacterized protein yvmC
著者Bonnefond, L, Arai, T, Suzuki, T, Ishitani, R, Nureki, O.
登録日2010-09-03
公開日2011-02-23
最終更新日2017-11-08
実験手法X-RAY DIFFRACTION (1.701 Å)
主引用文献Structural basis for nonribosomal peptide synthesis by an aminoacyl-tRNA synthetase paralog.
Proc.Natl.Acad.Sci.USA, 108, 2011
3OQH
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Crystal structure of B. licheniformis CDPS yvmC-BLIC
分子名称: GLYCEROL, Putative uncharacterized protein yvmC
著者Bonnefond, L, Arai, T, Suzuki, T, Ishitani, R, Nureki, O.
登録日2010-09-03
公開日2011-02-23
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.901 Å)
主引用文献Structural basis for nonribosomal peptide synthesis by an aminoacyl-tRNA synthetase paralog.
Proc.Natl.Acad.Sci.USA, 108, 2011
7DC5
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Crystal structure of fungal antifreeze protein with intermediate activity
分子名称: Antifreeze protein, SULFATE ION
著者Khan, N.M.M.U, Arai, T, Tsuda, S, Kondo, H.
登録日2020-10-23
公開日2021-10-27
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.54 Å)
主引用文献Characterization of microbial antifreeze protein with intermediate activity suggests that a bound-water network is essential for hyperactivity.
Sci Rep, 11, 2021
7DDB
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Crystal structure of fungal antifreeze protein with intermediate activity
分子名称: Antifreeze protein, MAGNESIUM ION
著者Khan, N.M.M.U, Arai, T, Tsuda, S, Kondo, H.
登録日2020-10-28
公開日2021-11-03
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.72 Å)
主引用文献Characterization of microbial antifreeze protein with intermediate activity suggests that a bound-water network is essential for hyperactivity.
Sci Rep, 11, 2021
2Z1E
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Crystal structure of HypE from Thermococcus kodakaraensis (outward form)
分子名称: Hydrogenase expression/formation protein HypE
著者Watanabe, S, Matsumi, R, Arai, T, Atomi, H, Imanaka, T, Miki, K.
登録日2007-05-08
公開日2007-07-17
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献Crystal Structures of [NiFe] Hydrogenase Maturation Proteins HypC, HypD, and HypE: Insights into Cyanation Reaction by Thiol Redox Signaling
Mol.Cell, 27, 2007
2Z1C
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Crystal structure of HypC from Thermococcus kodakaraensis KOD1
分子名称: GLYCEROL, Hydrogenase expression/formation protein HypC, TETRAETHYLENE GLYCOL
著者Watanabe, S, Matsumi, R, Arai, T, Atomi, H, Imanaka, T, Miki, K.
登録日2007-05-08
公開日2007-07-17
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Crystal Structures of [NiFe] Hydrogenase Maturation Proteins HypC, HypD, and HypE: Insights into Cyanation Reaction by Thiol Redox Signaling
Mol.Cell, 27, 2007
2Z1F
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Crystal structure of HypE from Thermococcus kodakaraensis (inward form)
分子名称: Hydrogenase expression/formation protein HypE
著者Watanabe, S, Matsumi, R, Arai, T, Atomi, H, Imanaka, T, Miki, K.
登録日2007-05-08
公開日2007-07-17
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Crystal Structures of [NiFe] Hydrogenase Maturation Proteins HypC, HypD, and HypE: Insights into Cyanation Reaction by Thiol Redox Signaling
Mol.Cell, 27, 2007
2Z1D
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Crystal structure of [NiFe] hydrogenase maturation protein, HypD from Thermococcus kodakaraensis
分子名称: Hydrogenase expression/formation protein hypD, IRON/SULFUR CLUSTER
著者Watanabe, S, Matsumi, R, Arai, T, Atomi, H, Imanaka, T, Miki, K.
登録日2007-05-08
公開日2007-07-17
最終更新日2014-11-12
実験手法X-RAY DIFFRACTION (2.07 Å)
主引用文献Crystal Structures of [NiFe] Hydrogenase Maturation Proteins HypC, HypD, and HypE: Insights into Cyanation Reaction by Thiol Redox Signaling
Mol.Cell, 27, 2007
3A43
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Crystal structure of HypA
分子名称: Hydrogenase nickel incorporation protein hypA, ZINC ION
著者Watanabe, S, Arai, T, Matsumi, R, Aromi, H, Imanaka, T, Miki, K.
登録日2009-06-30
公開日2009-10-06
最終更新日2016-12-21
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Crystal structure of HypA, a nickel-binding metallochaperone for [NiFe] hydrogenase maturation.
J.Mol.Biol., 394, 2009
3A44
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Crystal structure of HypA in the dimeric form
分子名称: Hydrogenase nickel incorporation protein hypA, ZINC ION
著者Watanabe, S, Arai, T, Matsumi, R, Atomi, H, Imanaka, T, Miki, K.
登録日2009-06-30
公開日2009-10-06
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (3.31 Å)
主引用文献Crystal structure of HypA, a nickel-binding metallochaperone for [NiFe] hydrogenase maturation.
J.Mol.Biol., 394, 2009
3ACS
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BU of 3acs by Molmil
Crystal Structure of Cellvibrio gilvus Cellobiose Phosphorylase W488F mutant
分子名称: Cellobiose Phosphorylase, SULFATE ION, beta-D-glucopyranose
著者Hidaka, M, Arai, T, Fushinobu, S.
登録日2010-01-08
公開日2010-12-22
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.51 Å)
主引用文献Engineering of cellobiose phosphorylase
To be Published
3VOT
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Crystal structure of L-amino acid ligase from Bacillus licheniformis
分子名称: ADENOSINE-5'-DIPHOSPHATE, CALCIUM ION, CHLORIDE ION, ...
著者Suzuki, M, Takahashi, Y, Noguchi, A, Arai, T, Yagasaki, M, Kino, K, Saito, J.
登録日2012-02-08
公開日2012-11-07
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献The structure of L-amino-acid ligase from Bacillus licheniformis
Acta Crystallogr.,Sect.D, 68, 2012

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件を2024-05-15に公開中

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