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PDB: 4079 件

3EXI
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Crystal structure of the pyruvate dehydrogenase (E1p) component of human pyruvate dehydrogenase complex with the subunit-binding domain (SBD) of E2p, but SBD cannot be modeled into the electron density
分子名称: CHLORIDE ION, POTASSIUM ION, Pyruvate dehydrogenase E1 component subunit alpha, ...
著者Kato, M, Wynn, R.M, Chuang, J.L, Tso, S.-C, Machius, M, Li, J, Chuang, D.T.
登録日2008-10-16
公開日2008-11-25
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structural basis for inactivation of the human pyruvate dehydrogenase complex by phosphorylation: role of disordered phosphorylation loops.
Structure, 16, 2008
3EXH
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Crystal structure of the pyruvate dehydrogenase (E1p) component of human pyruvate dehydrogenase complex
分子名称: GLYCEROL, MANGANESE (II) ION, POTASSIUM ION, ...
著者Kato, M, Wynn, R.M, Chuang, J.L, Tso, S.-C, Machius, M, Li, J, Chuang, D.T.
登録日2008-10-16
公開日2008-11-25
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.444 Å)
主引用文献Structural basis for inactivation of the human pyruvate dehydrogenase complex by phosphorylation: role of disordered phosphorylation loops.
Structure, 16, 2008
3NLT
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Structure of endothelial nitric oxide synthase heme domain complexed with N1-{(3'S,4'S)-4'-[(6"-amino-4"-methylpyridin-2"-yl)methyl]pyrrolidin-3'-yl}- N2-(3'-fluorophenethyl)ethane-1,2-diamine tetrahydrochloride
分子名称: 5,6,7,8-TETRAHYDROBIOPTERIN, 6-({(3S,4S)-4-[2-({2,2-difluoro-2-[(2R)-piperidin-2-yl]ethyl}amino)ethoxy]pyrrolidin-3-yl}methyl)-4-methylpyridin-2-amine, CACODYLIC ACID, ...
著者Xue, F, Li, H, Fang, J, Delker, S.L, Poulos, T.L, Silverman, R.B.
登録日2010-06-21
公開日2011-01-19
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.74 Å)
主引用文献Potent, highly selective, and orally bioavailable gem-difluorinated monocationic inhibitors of neuronal nitric oxide synthase.
J.Am.Chem.Soc., 132, 2010
3NLU
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BU of 3nlu by Molmil
Structure of endothelial nitric oxide synthase heme domain complexed with N1-{(3'R,4'R)-4'-[(6"-amino-4"-methylpyridin-2"-yl)methyl]pyrrolidin-3'-yl}-N2-(3'-fluorophenethyl)ethane-1,2-diamine tetrahydrochloride
分子名称: 5,6,7,8-TETRAHYDROBIOPTERIN, 6-{[(3R,4R)-4-(2-{[2,2-difluoro-2-(3-fluorophenyl)ethyl]amino}ethoxy)pyrrolidin-3-yl]methyl}-4-methylpyridin-2-amine, ACETATE ION, ...
著者Xue, F, Li, H, Fang, J, Delker, S.L, Poulos, T.L, Silverman, R.B.
登録日2010-06-21
公開日2011-01-19
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.65 Å)
主引用文献Potent, highly selective, and orally bioavailable gem-difluorinated monocationic inhibitors of neuronal nitric oxide synthase.
J.Am.Chem.Soc., 132, 2010
3WDT
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BU of 3wdt by Molmil
The apo-form structure of PtLic16A from Paecilomyces thermophila
分子名称: Beta-1,3-1,4-glucanase, SULFATE ION
著者Cheng, Y.S, Huang, C.H, Chen, C.C, Huang, T.Y, Ko, T.P, Huang, J.W, Wu, T.H, Liu, J.R, Guo, R.T.
登録日2013-06-25
公開日2014-07-09
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.98 Å)
主引用文献Structural and mutagenetic analyses of a 1,3-1,4-beta-glucanase from Paecilomyces thermophila
Biochim.Biophys.Acta, 1844, 2014
6JI7
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BU of 6ji7 by Molmil
Coffeetides: iron-binding cysteine rich peptides from coffee waste
分子名称: coffeetide
著者Fan, J.S, Huang, J.Y, Wong, K.H, Tay, S.V.
登録日2019-02-20
公開日2020-02-26
実験手法SOLUTION NMR
主引用文献Coffeetides: iron-binding cysteine rich peptides from coffee waste
To Be Published
6BVF
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BU of 6bvf by Molmil
Cryo-EM Structure of Hepatitis B virus T=4 capsid in complex with the fluorescent allosteric modulator HAP-TAMRA
分子名称: Capsid protein, Heteroaryldihydropyrimidine tetramethylrodamine
著者Schlicksup, C, Wang, J.C, Zlotnick, A.
登録日2017-12-12
公開日2018-02-07
最終更新日2024-05-15
実験手法ELECTRON MICROSCOPY (4 Å)
主引用文献Hepatitis B virus core protein allosteric modulators can distort and disrupt intact capsids.
Elife, 7, 2018
6C6C
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BU of 6c6c by Molmil
Structure of glycolipid aGSA[20,6P] in complex with mouse CD1d
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Antigen-presenting glycoprotein CD1d1, Beta-2-microglobulin, ...
著者Zajonc, D.M, Wang, J.
登録日2018-01-18
公開日2019-01-30
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.08 Å)
主引用文献A molecular switch in mouse CD1d modulates natural killer T cell activation by alpha-galactosylsphingamides.
J.Biol.Chem., 294, 2019
6C6H
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Structure of glycolipid aGSA[8,P5m] in complex with mouse CD1d
分子名称: (5R,6S,7S)-5,6-dihydroxy-7-(octanoylamino)-N-(3-pentylphenyl)-8-{[(2S,3R,4S,5R,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)te trahydro-2H-pyran-2-yl]oxy}octanamide, 2-acetamido-2-deoxy-beta-D-glucopyranose, Antigen-presenting glycoprotein CD1d1, ...
著者Zajonc, D.M, Wang, J.
登録日2018-01-18
公開日2019-01-30
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献A molecular switch in mouse CD1d modulates natural killer T cell activation by alpha-galactosylsphingamides.
J.Biol.Chem., 294, 2019
2L3T
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BU of 2l3t by Molmil
Solution structure of tandem SH2 domain from Spt6
分子名称: Transcription elongation factor SPT6
著者Liu, J, Zhang, J, Wu, J, Shi, Y.
登録日2010-09-22
公開日2011-06-15
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献Solution structure of the tandem SH2 domains from Spt6 and their binding to the phosphorylated RNA polymerase II C-terminal domain
To be Published
3WP5
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BU of 3wp5 by Molmil
The crystal structure of mutant CDBFV E109A from Neocallimastix patriciarum
分子名称: CDBFV
著者Cheng, Y.S, Chen, C.C, Huang, C.H, Huang, T.Y, Ko, T.P, Huang, J.W, Wu, T.H, Liu, J.R, Guo, R.T.
登録日2014-01-09
公開日2014-03-19
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.32 Å)
主引用文献Structural analysis of a glycoside hydrolase family 11 xylanase from Neocallimastix patriciarum: insights into the molecular basis of a thermophilic enzyme.
J.Biol.Chem., 289, 2014
4ORB
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BU of 4orb by Molmil
Crystal structure of mouse calcineurin
分子名称: CALCIUM ION, Calcineurin subunit B type 1, FE (III) ION, ...
著者Ma, L, Li, S.J, Wang, J, Wu, J.W, Wang, Z.X.
登録日2014-02-11
公開日2015-05-20
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (3.108 Å)
主引用文献Cooperative autoinhibition and multi-level activation mechanisms of calcineurin
To be Published
2LA9
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BU of 2la9 by Molmil
NMR structure of Pseudouridine_ASL_Tyr
分子名称: RNA (5'-R(*GP*GP*GP*GP*AP*CP*UP*GP*UP*AP*AP*AP*(PSU)P*CP*CP*CP*C)-3')
著者Denmon, A.P, Wang, J, Nikonowicz, E.P.
登録日2011-03-09
公開日2011-08-03
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Conformation Effects of Base Modification on the Anticodon Stem-Loop of Bacillus subtilis tRNA(Tyr).
J.Mol.Biol., 412, 2011
2APW
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BU of 2apw by Molmil
Crystal Structure of the G17E/A52V/S54N/K66E/E80V/L81S/T87S/G96V variant of the murine T cell receptor V beta 8.2 domain
分子名称: MALONIC ACID, T cell receptor beta chain V
著者Cho, S, Swaminathan, C.P, Yang, J, Kerzic, M.C, Guan, R, Kieke, M.C, Kranz, D.M, Mariuzza, R.A, Sundberg, E.J.
登録日2005-08-16
公開日2006-03-21
最終更新日2018-04-04
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structural basis of affinity maturation and intramolecular cooperativity in a protein-protein interaction.
Structure, 13, 2005
6MTI
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BU of 6mti by Molmil
Synaptotagmin-1 C2A, C2B domains and SNARE-pin proteins (5CCI) individually docked into Cryo-EM map of C2AB-SNARE complexes helically organized on lipid nanotube surface in presence of Mg2+
分子名称: MAGNESIUM ION, Synaptosomal-associated protein 25, Synaptotagmin-1, ...
著者Grushin, K, Wang, J, Coleman, J, Rothman, J, Sindelar, C, Krishnakumar, S.
登録日2018-10-19
公開日2019-04-24
最終更新日2024-03-13
実験手法ELECTRON MICROSCOPY (10.4 Å)
主引用文献Structural basis for the clamping and Ca2+activation of SNARE-mediated fusion by synaptotagmin.
Nat Commun, 10, 2019
3WDY
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BU of 3wdy by Molmil
The complex structure of E113A with cellotetraose
分子名称: Beta-1,3-1,4-glucanase, SULFATE ION, beta-D-glucopyranose, ...
著者Cheng, Y.S, Huang, C.H, Chen, C.C, Huang, T.Y, Ko, T.P, Huang, J.W, Wu, T.H, Liu, J.R, Guo, R.T.
登録日2013-06-25
公開日2014-07-09
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.94 Å)
主引用文献Structural and mutagenetic analyses of a 1,3-1,4-beta-glucanase from Paecilomyces thermophila
Biochim.Biophys.Acta, 1844, 2014
3TUC
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BU of 3tuc by Molmil
Crystal structure of SYK kinase domain with 1-benzyl-N-(5-(6,7-dimethoxyquinolin-4-yloxy)pyridin-2-yl)-2-oxo-1,2-dihydropyridine-3-carboxamide
分子名称: 1-benzyl-N-{5-[(6,7-dimethoxyquinolin-4-yl)oxy]pyridin-2-yl}-2-oxo-1,2-dihydropyridine-3-carboxamide, Tyrosine-protein kinase SYK
著者Lovering, F, McDonald, J, Whitlock, G, Glossop, P, Phillips, C, Sabnis, Y, Ryan, M, Fitz, L, Lee, J, Chang, J.S, Han, S, Kurumbail, R, Thorarenson, A.
登録日2011-09-16
公開日2012-08-29
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Identification of Type-II Inhibitors Using Kinase Structures.
Chem.Biol.Drug Des., 80, 2012
1Z29
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BU of 1z29 by Molmil
Crystal Structures of SULT1A2 and SULT1A1*3: Implications in the bioactivation of N-hydroxy-2-acetylamino fluorine (OH-AAF)
分子名称: ACETIC ACID, ADENOSINE-3'-5'-DIPHOSPHATE, CALCIUM ION, ...
著者Lu, J, Li, H, Liu, M.C, Zhang, J, Li, M, An, X, Chang, W.
登録日2005-03-07
公開日2006-05-30
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Crystal structures of SULT1A2 and SULT1A1 *3: insights into the substrate inhibition and the role of Tyr149 in SULT1A2.
Biochem.Biophys.Res.Commun., 396, 2010
4QNH
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BU of 4qnh by Molmil
Calcium-calmodulin (T79D) complexed with the calmodulin binding domain from a small conductance potassium channel SK2-a
分子名称: CALCIUM ION, Calmodulin, SULFATE ION, ...
著者Zhang, M, Pascal, J.M, Logothetis, D.E, Zhang, J.F.
登録日2014-06-17
公開日2014-08-06
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.02 Å)
主引用文献Selective phosphorylation modulates the PIP2 sensitivity of the CaM-SK channel complex.
Nat.Chem.Biol., 10, 2014
4QPG
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Crystal structure of empty hepatitis A virus
分子名称: CHLORIDE ION, Capsid protein VP0, Capsid protein VP1, ...
著者Wang, X, Ren, J, Gao, Q, Hu, Z, Sun, Y, Li, X, Rowlands, D.J, Yin, W, Wang, J, Stuart, D.I, Rao, Z, Fry, E.E.
登録日2014-06-23
公開日2014-10-15
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (3.5 Å)
主引用文献Hepatitis A virus and the origins of picornaviruses.
Nature, 517, 2015
3S0Z
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BU of 3s0z by Molmil
Crystal structure of New Delhi Metallo-beta-lactamase (NDM-1)
分子名称: Metallo-beta-lactamase, ZINC ION
著者Guo, Y, Wang, J, Niu, G.J, Shui, W.Q, Sun, Y.N, Lou, Z.Y, Rao, Z.H.
登録日2011-05-13
公開日2011-06-01
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献A structural view of the antibiotic degradation enzyme NDM-1 from a superbug.
Protein Cell, 2011
2LEO
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BU of 2leo by Molmil
Solution structure of esophageal cancer-related gene 2
分子名称: Serine protease inhibitor Kazal-type 7
著者Feng, Y, Geng, Y, Wang, J.
登録日2011-06-20
公開日2012-05-30
最終更新日2023-06-14
実験手法SOLUTION NMR
主引用文献NMR structure note: human esophageal cancer-related gene 2
J.Biomol.Nmr, 53, 2012
4DTJ
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BU of 4dtj by Molmil
RB69 DNA Polymerase Ternary Complex with dTTP Opposite an Abasic Site and ddT/dA as the Penultimate Base-pair
分子名称: CALCIUM ION, DNA polymerase, DNA primer, ...
著者Xia, S, Wang, J, Konigsberg, W.H.
登録日2012-02-21
公開日2012-06-06
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Contribution of Partial Charge Interactions and Base Stacking to the Efficiency of Primer Extension at and beyond Abasic Sites in DNA.
Biochemistry, 51, 2012
4DU3
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BU of 4du3 by Molmil
RB69 DNA Polymerase Ternary Complex with dDTP Opposite dT with 3-Deaza-adenine at the N-1 Position of Template Strand
分子名称: 2'-DEOXYADENOSINE 5'-TRIPHOSPHATE, CALCIUM ION, DNA polymerase, ...
著者Xia, S, Wang, J, Konigsberg, W.H.
登録日2012-02-21
公開日2012-05-23
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.02 Å)
主引用文献Probing minor groove hydrogen bonding interactions between RB69 DNA polymerase and DNA.
Biochemistry, 51, 2012
3WDW
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BU of 3wdw by Molmil
The apo-form structure of E113A from Paecilomyces thermophila
分子名称: Beta-1,3-1,4-glucanase, SULFATE ION
著者Cheng, Y.S, Huang, C.H, Chen, C.C, Huang, T.Y, Ko, T.P, Huang, J.W, Wu, T.H, Liu, J.R, Guo, R.T.
登録日2013-06-25
公開日2014-07-09
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structural and mutagenetic analyses of a 1,3-1,4-beta-glucanase from Paecilomyces thermophila
Biochim.Biophys.Acta, 1844, 2014

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件を2024-08-07に公開中

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