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PDB: 253 results

4BWI
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BU of 4bwi by Molmil
Structure of the phytochrome Cph2 from Synechocystis sp. PCC6803
Descriptor: FORMIC ACID, GLUTAMIC ACID, GLYCEROL, ...
Authors:Anders, K, Angerer, V, Widany, G.D, Mroginski, M.A, von Stetten, D, Essen, L.-O.
Deposit date:2013-07-03
Release date:2013-10-30
Last modified:2019-05-08
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structure of the Cyanobacterial Phytochrome 2 Photosensor Implies a Tryptophan Switch for Phytochrome Signaling.
J.Biol.Chem., 288, 2013
5LOI
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BU of 5loi by Molmil
Crystal structure of Myceliophthora thermophila Rad26 (residues 373-841)
Descriptor: Rad26
Authors:Andersen, K.R.
Deposit date:2016-08-09
Release date:2017-03-29
Last modified:2017-05-31
Method:X-RAY DIFFRACTION (3.153 Å)
Cite:Insights into Rad3 kinase recruitment from the crystal structure of the DNA damage checkpoint protein Rad26.
J. Biol. Chem., 292, 2017
6X07
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BU of 6x07 by Molmil
Nic96 from S. cerevisiae bound by VHH-SAN12
Descriptor: Nucleoporin NIC96, VHH-SAN12
Authors:Andersen, K, Nordeen, S.A, Schwartz, T.U.
Deposit date:2020-05-15
Release date:2020-12-09
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:A nanobody suite for yeast scaffold nucleoporins provides details of the nuclear pore complex structure.
Nat Commun, 11, 2020
2ABD
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BU of 2abd by Molmil
THE THREE-DIMENSIONAL STRUCTURE OF ACYL-COENZYME A BINDING PROTEIN FROM BOVINE LIVER. STRUCTURAL REFINEMENT USING HETERONUCLEAR MULTIDIMENSIONAL NMR SPECTROSCOPY
Descriptor: ACYL-COENZYME A BINDING PROTEIN
Authors:Andersen, K.V, Poulsen, F.M.
Deposit date:1993-03-05
Release date:1993-07-15
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:The three-dimensional structure of acyl-coenzyme A binding protein from bovine liver: structural refinement using heteronuclear multidimensional NMR spectroscopy.
J.Biomol.NMR, 3, 1993
3HJ3
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BU of 3hj3 by Molmil
Crystal Structure of the ChTS-DHFR F207A Non-Active Site Mutant
Descriptor: 10-PROPARGYL-5,8-DIDEAZAFOLIC ACID, 2'-DEOXYURIDINE 5'-MONOPHOSPHATE, Chain A, ...
Authors:Anderson, K.S, Martucci, W.E.
Deposit date:2009-05-20
Release date:2010-06-02
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Exploring novel strategies for AIDS protozoal pathogens: alpha-helix mimetics targeting a key allosteric protein-protein interaction in C. hominis TS-DHFR.
Medchemcomm, 4, 2013
1USQ
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BU of 1usq by Molmil
Complex of E. Coli DraE adhesin with Chloramphenicol
Descriptor: 1,2-ETHANEDIOL, CHLORAMPHENICOL, DR HEMAGGLUTININ STRUCTURAL SUBUNIT, ...
Authors:Anderson, K.L, Billington, J, Pettigrew, D, Cota, E, Roversi, P, Simpson, P, Chen, H.A, Urvil, P, Dumerle, L, Barlow, P, Medof, E, Smith, R.A.G, Nowicki, B, Le Bouguenec, C, Lea, S.M, Matthews, S.
Deposit date:2003-11-27
Release date:2004-08-31
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:High Resolution Studies of the Afa/Dr Adhesin Drae and its Interaction with Chloramphenicol
J.Biol.Chem., 279, 2004
1UT1
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BU of 1ut1 by Molmil
DraE adhesin from Escherichia Coli
Descriptor: 1,2-ETHANEDIOL, DR HEMAGGLUTININ STRUCTURAL SUBUNIT, SULFATE ION
Authors:Anderson, K.L, Billington, J, Pettigrew, D, Cota, E, Roversi, P, Simpson, P, Chen, H.A, Urvil, P, Dumerle, L, Barlow, P, Medof, E, Smith, R.A.G, Nowicki, B, Le Bouguenec, C, Lea, S.M, Matthews, S.
Deposit date:2003-12-02
Release date:2004-08-31
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:High Resolution Studies of the Afa/Dr Adhesin Drae and its Interaction with Chloramphenicol
J.Biol.Chem., 279, 2004
1UT2
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BU of 1ut2 by Molmil
AfaE-3 adhesin from Escherichia Coli
Descriptor: AFIMBRIAL ADHESIN AFA-III, SULFATE ION
Authors:Anderson, K.L, Billington, J, Pettigrew, D, Cota, E, Roversi, P, Simpson, P, Chen, H.A, Urvil, P, Dumerle, L, Barlow, P, Medof, E, Smith, R.A.G, Nowicki, B, Le Bouguenec, C, Lea, S.M, Matthews, S.
Deposit date:2003-12-02
Release date:2004-08-31
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:High Resolution Studies of the Afa/Dr Adhesin Drae and its Interaction with Chloramphenicol
J.Biol.Chem., 279, 2004
1USZ
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BU of 1usz by Molmil
SeMet AfaE-3 adhesin from Escherichia Coli
Descriptor: AFIMBRIAL ADHESIN AFA-III, CHLORIDE ION, SULFATE ION
Authors:Anderson, K.L, Billington, J, Pettigrew, D, Cota, E, Roversi, P, Simpson, P, Chen, H.A, Urvil, P, Dumerle, L, Barlow, P, Medof, E, Smith, R.A.G, Nowicki, B, Le Bouguenec, C, Lea, S.M, Matthews, S.
Deposit date:2003-12-02
Release date:2004-08-31
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (3.28 Å)
Cite:High Resolution Studies of the Afa/Dr Adhesin Drae and its Interaction with Chloramphenicol
J.Biol.Chem., 279, 2004
1RXL
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BU of 1rxl by Molmil
Solution structure of the engineered protein Afae-dsc
Descriptor: Afimbrial adhesin AFA-III
Authors:Anderson, K.L, Billington, J, Pettigrew, D, Cota, E, Roversi, P, Simpson, P, Chen, H.A, Urvil, P, du Merle, L, Barlow, P.N, Medof, M.E, Smith, R.A, Nowicki, B, Le Bouguenec, C, Lea, S.M, Matthews, S.
Deposit date:2003-12-18
Release date:2005-01-11
Last modified:2020-02-05
Method:SOLUTION NMR
Cite:An atomic resolution model for assembly, architecture, and function of the Dr adhesins.
Mol.Cell, 15, 2004
3G10
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BU of 3g10 by Molmil
Structure of S. pombe Pop2p - Mg2+ and Mn2+ bound form
Descriptor: CCR4-Not complex subunit Caf1, MAGNESIUM ION, MANGANESE (II) ION
Authors:Andersen, K.R, Jonstrup, A.T, Van, L.B, Brodersen, D.E.
Deposit date:2009-01-29
Release date:2009-03-31
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.597 Å)
Cite:The activity and selectivity of fission yeast Pop2p are affected by a high affinity for Zn2+ and Mn2+ in the active site
Rna, 15, 2009
3G0Z
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BU of 3g0z by Molmil
Structure of S. pombe Pop2p - Zn2+ and Mn2+ bound form
Descriptor: CCR4-Not complex subunit Caf1, MANGANESE (II) ION, ZINC ION
Authors:Andersen, K.R, Jonstrup, A.T, Van, L.B, Brodersen, D.E.
Deposit date:2009-01-29
Release date:2009-03-31
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.004 Å)
Cite:The activity and selectivity of fission yeast Pop2p are affected by a high affinity for Zn2+ and Mn2+ in the active site
Rna, 15, 2009
5A8J
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BU of 5a8j by Molmil
Crystal structure of the ArnB paralog VWA2 from Sulfolobus acidocaldarius
Descriptor: CHLORIDE ION, CITRIC ACID, GLYCEROL, ...
Authors:Hoffmann, L, Anders, K, Reimann, J, Linne, U, Essen, L.-O, Albers, S.-V.
Deposit date:2015-07-16
Release date:2016-06-22
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.46 Å)
Cite:Phosphorylation-Dependent Interaction between an Archaeal Von Willebrand and Fha Domain Recruits Arna-Arnb Complex to DNA for Repression of Motility
To be Published
5A8I
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BU of 5a8i by Molmil
Crystal structure of the FHA domain of ArnA from Sulfolobus acidocaldarius
Descriptor: ARNA, GLYCEROL, SULFATE ION
Authors:Hoffmann, L, Anders, K, Reimann, J, Linne, U, Essen, L.-O, Albers, S.-V.
Deposit date:2015-07-16
Release date:2016-06-22
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Phosphorylation-Dependent Interaction between an Archaeal Von Willebrand and Fha Domain Recruits Arna-Arnb Complex to DNA for Repression of Motility
To be Published
5LS2
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BU of 5ls2 by Molmil
Receptor mediated chitin perception in legumes is functionally seperable from Nod factor perception
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, LysM type receptor kinase, SULFATE ION
Authors:Bozsoki, Z, Cheng, J, Feng, F, Gysel, K, Andersen, K.R, Oldroyd, G, Blaise, M, Radutoiu, S, Stougaard, J.
Deposit date:2016-08-22
Release date:2017-08-23
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Receptor-mediated chitin perception in legume roots is functionally separable from Nod factor perception.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
6T8V
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BU of 6t8v by Molmil
Complement factor B in complex with (S)-5,7-Dimethyl-4-((2-phenylpiperidin-1-yl)methyl)-1H-indole
Descriptor: 4-[(2~{S})-1-[(5,7-dimethyl-1~{H}-indol-4-yl)methyl]piperidin-2-yl]benzoic acid, Complement factor B, SULFATE ION, ...
Authors:Mainolfi, N, Ehara, T, Karki, R.G, Anderson, K, Mac Sweeney, A, Wiesmann, C, Adams, C, Mainolfi, N, Liao, S.-M, Argikar, U.A, Jendza, K, Zhang, C, Powers, J, Klosowski, D.W, Crowley, M, Kawanami, T, Ding, J, April, M, Forster, C, Serrano-Wu, M, Capparelli, M, Ramqaj, R, Solovay, C, Cumin, F, Smith, T.M, Ferrara, L, Lee, W, Long, D, Prentiss, M, De Erkenez, A, Yang, L, Fang, L, Sellner, H, Sirockin, F, Valeur, E, Erbel, P, Ramage, P, Gerhartz, B, Schubart, A, Flohr, S, Gradoux, N, Feifel, R, Vogg, B, Wiesmann, C, Maibaum, J, Eder, J, Sedrani, R, Harrison, R.A, Mogi, M, Jaffee, B.D, Adams, C.M.
Deposit date:2019-10-25
Release date:2020-03-04
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.29 Å)
Cite:Discovery of 4-((2S,4S)-4-Ethoxy-1-((5-methoxy-7-methyl-1H-indol-4-yl)methyl)piperidin-2-yl)benzoic Acid (LNP023), a Factor B Inhibitor Specifically Designed To Be Applicable to Treating a Diverse Array of Complement Mediated Diseases.
J.Med.Chem., 63, 2020
4V7J
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BU of 4v7j by Molmil
Structure of RelE nuclease bound to the 70S ribosome (precleavage state)
Descriptor: 30S ribosomal protein S10, 30S ribosomal protein S11, 30S ribosomal protein S12, ...
Authors:Neubauer, C, Gao, Y.-G, Andersen, K.R, Dunham, C.M, Kelley, A.C, Hentschel, J, Gerdes, K, Ramakrishnan, V, Brodersen, D.E.
Deposit date:2009-11-02
Release date:2014-07-09
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:The structural basis for mRNA recognition and cleavage by the ribosome-dependent endonuclease RelE.
Cell(Cambridge,Mass.), 139, 2009
6OJU
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BU of 6oju by Molmil
Crystal structure of human thymidylate synthase Delta (7-29) in complex with dUMP and 2-amino-4-oxo-4,7-dihydro-pyrrolo[2,3-d]pyrimidine-methyl-phenyl-D-glutamic acid
Descriptor: 2'-DEOXYURIDINE 5'-MONOPHOSPHATE, N-{4-[(2-amino-4-oxo-4,7-dihydro-3H-pyrrolo[2,3-d]pyrimidin-5-yl)methyl]benzene-1-carbonyl}-D-glutamic acid, Thymidylate synthase,Thymidylate synthase
Authors:Czyzyk, D.J, Anderson, K.S, Valhondo, M, Jorgensen, W.L.
Deposit date:2019-04-12
Release date:2019-06-19
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.884 Å)
Cite:Understanding the structural basis of species selective, stereospecific inhibition for Cryptosporidium and human thymidylate synthase.
Febs Lett., 593, 2019
4WE1
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BU of 4we1 by Molmil
Crystal Structure of HIV-1 Reverse Transcriptase in Complex with 5-(2-(2-(2,4-dioxo-3,4-dihydropyrimidin-1(2H)-yl)ethoxy)phenoxy)-2-naphthonitrile (JLJ600)
Descriptor: 5-{2-[2-(2,4-dioxo-3,4-dihydropyrimidin-1(2H)-yl)ethoxy]phenoxy}naphthalene-2-carbonitrile, Gag-Pol polyprotein, MAGNESIUM ION, ...
Authors:Frey, K.M, Anderson, K.S.
Deposit date:2014-09-09
Release date:2014-12-03
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.491 Å)
Cite:Picomolar Inhibitors of HIV-1 Reverse Transcriptase: Design and Crystallography of Naphthyl Phenyl Ethers.
Acs Med.Chem.Lett., 5, 2014
4V7K
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BU of 4v7k by Molmil
Structure of RelE nuclease bound to the 70S ribosome (postcleavage state)
Descriptor: 30S ribosomal protein S10, 30S ribosomal protein S11, 30S ribosomal protein S12, ...
Authors:Neubauer, C, Gao, Y.-G, Andersen, K.R, Dunham, C.M, Kelley, A.C, Hentschel, J, Gerdes, K, Ramakrishnan, V, Brodersen, D.E.
Deposit date:2009-11-02
Release date:2014-07-09
Last modified:2014-12-10
Method:X-RAY DIFFRACTION (3.6 Å)
Cite:The structural basis for mRNA recognition and cleavage by the ribosome-dependent endonuclease RelE.
Cell(Cambridge,Mass.), 139, 2009
2FVN
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BU of 2fvn by Molmil
The fibrillar tip complex of the Afa/Dr adhesins from pathogen E. coli displays synergistic binding to 5 1 and v 3 integrins
Descriptor: Protein afaD
Authors:Cota, E, Simpson, P, Anderson, K.L, Matthews, S.J.
Deposit date:2006-01-31
Release date:2007-02-27
Last modified:2022-03-09
Method:SOLUTION NMR
Cite:The solution structure of the invasive tip complex from Afa/Dr fibrils
Mol.Microbiol., 62, 2006
7PB6
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BU of 7pb6 by Molmil
Structure of LPMO domain of colonization factor GbpA from Vibrio cholerae in the presence of potassium
Descriptor: COPPER (II) ION, GlcNAc-binding protein A, POTASSIUM ION, ...
Authors:Bjerregaard-Andersen, K, Krengel, U.
Deposit date:2021-07-31
Release date:2022-08-10
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Structure of LPMO domain of colonization factor GbpA from Vibrio cholerae in the presence of potassium
To Be Published
7M8Y
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BU of 7m8y by Molmil
CRYSTAL STRUCTURE OF THE SARS-COV-2(2019-NCOV) MAIN PROTEASE IN COMPLEX WITH COMPOUND 15
Descriptor: 3C-like proteinase, 5-{3-[3-chloro-5-(2-phenylethoxy)phenyl]-2-oxo-2H-[1,3'-bipyridin]-5-yl}pyrimidine-2,4(1H,3H)-dione
Authors:Deshmukh, M.G, Ippolito, J.A, Zhang, C.H, Jorgensen, W.L, Anderson, K.S.
Deposit date:2021-03-30
Release date:2021-06-30
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Structure-guided design of a perampanel-derived pharmacophore targeting the SARS-CoV-2 main protease.
Structure, 29, 2021
7M90
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BU of 7m90 by Molmil
CRYSTAL STRUCTURE OF THE SARS-COV-2(2019-NCOV) MAIN PROTEASE IN COMPLEX WITH COMPOUND 50
Descriptor: 3C-like proteinase, 5-(3-{3-chloro-5-[2-(3-oxopiperazin-1-yl)ethoxy]phenyl}-2-oxo-2H-[1,3'-bipyridin]-5-yl)pyrimidine-2,4(1H,3H)-dione
Authors:Deshmukh, M.G, Ippolito, J.A, Zhang, C.H, Jorgensen, W.L, Anderson, K.S.
Deposit date:2021-03-30
Release date:2021-06-30
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.19 Å)
Cite:Structure-guided design of a perampanel-derived pharmacophore targeting the SARS-CoV-2 main protease.
Structure, 29, 2021
7M8O
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BU of 7m8o by Molmil
CRYSTAL STRUCTURE OF THE SARS-COV-2(2019-NCOV) MAIN PROTEASE IN COMPLEX WITH COMPOUND 19
Descriptor: 3C-like proteinase, 5-(3-{3-chloro-5-[(3-fluorophenyl)methoxy]phenyl}-2-oxo-2H-[1,3'-bipyridin]-5-yl)pyrimidine-2,4(1H,3H)-dione
Authors:Deshmukh, M.G, Ippolito, J.A, Zhang, C.H, Jorgensen, W.L, Anderson, K.S.
Deposit date:2021-03-30
Release date:2021-06-30
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.44 Å)
Cite:Structure-guided design of a perampanel-derived pharmacophore targeting the SARS-CoV-2 main protease.
Structure, 29, 2021

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