Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 175 件

4FBY
DownloadVisualize
BU of 4fby by Molmil
fs X-ray diffraction of Photosystem II
分子名称: 1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROL, 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE, 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE, ...
著者Kern, J, Alonso-Mori, R, Hellmich, J, Tran, R, Hattne, J, Laksmono, H, Gloeckner, C, Echols, N, Sierra, R.G, Sellberg, J, Lassalle-Kaiser, B, Gildea, R.J, Glatzel, P, Grosse-Kunstleve, R.W, Latimer, M.J, Mcqueen, T.A, Difiore, D, Fry, A.R, Messerschmidt, M.M, Miahnahri, A, Schafer, D.W, Seibert, M.M, Sokaras, D, Weng, T.-C, Zwart, P.H, White, W.E, Adams, P.D, Bogan, M.J, Boutet, S, Williams, G.J, Messinger, J, Sauter, N.K, Zouni, A, Bergmann, U, Yano, J, Yachandra, V.K.
登録日2012-05-23
公開日2012-06-20
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (6.56 Å)
主引用文献Room temperature femtosecond X-ray diffraction of photosystem II microcrystals.
Proc.Natl.Acad.Sci.USA, 109, 2012
4OW3
DownloadVisualize
BU of 4ow3 by Molmil
Thermolysin structure determined by free-electron laser
分子名称: CALCIUM ION, Thermolysin, ZINC ION
著者Hattne, J, Echols, N, Tran, R, Kern, J, Gildea, R.J, Brewster, A.S, Alonso-Mori, R, Glockner, C, Hellmich, J, Laksmono, H, Sierra, R.G, Lassalle-Kaiser, B, Lampe, A, Han, G, Gul, S, DiFiore, D, Milathianaki, D, Fry, A.R, Miahnahri, A, White, W.E, Schafer, D.W, Seibert, M.M, Koglin, J.E, Sokaras, D, Weng, T.-C, Sellberg, J, Latimer, M.J, Glatzel, P, Zwart, P.H, Grosse-Kunstleve, R.W, Bogan, M.J, Messerschmidt, M, Williams, G.J, Boutet, S, Messinger, J, Zouni, A, Yano, J, Bergmann, U, Yachandra, V.K, Adams, P.D, Sauter, N.K.
登録日2014-01-30
公開日2014-03-12
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Accurate macromolecular structures using minimal measurements from X-ray free-electron lasers.
Nat.Methods, 11, 2014
3J40
DownloadVisualize
BU of 3j40 by Molmil
Validated Near-Atomic Resolution Structure of Bacteriophage Epsilon15 Derived from Cryo-EM and Modeling
分子名称: gp10, gp7
著者Baker, M.L, Hryc, C.F, Zhang, Q, Wu, W, Jakana, J, Haase-Pettingell, C, Afonine, P.V, Adams, P.D, King, J.A, Jiang, W, Chiu, W.
登録日2013-05-30
公開日2013-07-10
最終更新日2024-02-21
実験手法ELECTRON MICROSCOPY (4.5 Å)
主引用文献Validated near-atomic resolution structure of bacteriophage epsilon15 derived from cryo-EM and modeling.
Proc.Natl.Acad.Sci.USA, 110, 2013
3J7N
DownloadVisualize
BU of 3j7n by Molmil
Virus model of brome mosaic virus (second half data set)
分子名称: Capsid protein
著者Wang, Z, Hryc, C, Bammes, B, Afonine, P.V, Jakana, J, Chen, D.H, Liu, X, Baker, M.L, Kao, C, Ludtke, S.J, Schmid, M.F, Adams, P.D, Chiu, W.
登録日2014-07-18
公開日2014-09-10
最終更新日2024-02-21
実験手法ELECTRON MICROSCOPY (3.8 Å)
主引用文献An atomic model of brome mosaic virus using direct electron detection and real-space optimization.
Nat Commun, 5, 2014
3J7L
DownloadVisualize
BU of 3j7l by Molmil
Full virus map of brome mosaic virus
分子名称: Capsid protein
著者Wang, Z, Hryc, C, Bammes, B, Afonine, P.V, Jakana, J, Chen, D.H, Liu, X, Baker, M.L, Kao, C, Ludtke, S.J, Schmid, M.F, Adams, P.D, Chiu, W.
登録日2014-07-18
公開日2014-09-10
最終更新日2024-02-21
実験手法ELECTRON MICROSCOPY (3.8 Å)
主引用文献An atomic model of brome mosaic virus using direct electron detection and real-space optimization.
Nat Commun, 5, 2014
3J7M
DownloadVisualize
BU of 3j7m by Molmil
Virus model of brome mosaic virus (first half data set)
分子名称: Capsid protein
著者Wang, Z, Hryc, C, Bammes, B, Afonine, P.V, Jakana, J, Chen, D.H, Liu, X, Baker, M.L, Kao, C, Ludtke, S.J, Schmid, M.F, Adams, P.D, Chiu, W.
登録日2014-07-18
公開日2014-09-10
最終更新日2024-02-21
実験手法ELECTRON MICROSCOPY (3.8 Å)
主引用文献An atomic model of brome mosaic virus using direct electron detection and real-space optimization.
Nat Commun, 5, 2014
3OS9
DownloadVisualize
BU of 3os9 by Molmil
Estrogen Receptor
分子名称: 4-[1-allyl-7-(trifluoromethyl)-1H-indazol-3-yl]benzene-1,3-diol, Estrogen receptor
著者Bruning, J, Parent, A.A, Gil, G, Zhao, M, Nowak, J, Pace, M.C, Smith, C.L, Afonine, P.V, Adams, P.D, Katzenellenbogen, J.A, Nettles, K.W.
登録日2010-09-08
公開日2010-11-10
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.303 Å)
主引用文献Coupling of receptor conformation and ligand orientation determine graded activity.
Nat.Chem.Biol., 6, 2010
3OS8
DownloadVisualize
BU of 3os8 by Molmil
Estrogen Receptor
分子名称: 4-[1-benzyl-7-(trifluoromethyl)-1H-indazol-3-yl]benzene-1,3-diol, Estrogen receptor
著者Bruning, J, Parent, A.A, Gil, G, Zhao, M, Nowak, J, Pace, M.C, Smith, C.L, Afonine, P.V, Adams, P.D, Katzenellenbogen, J.A, Nettles, K.W.
登録日2010-09-08
公開日2010-11-10
最終更新日2021-10-06
実験手法X-RAY DIFFRACTION (2.031 Å)
主引用文献Coupling of receptor conformation and ligand orientation determine graded activity.
Nat.Chem.Biol., 6, 2010
3OSA
DownloadVisualize
BU of 3osa by Molmil
Estrogen Receptor
分子名称: 4-[1-(3-methylbut-2-en-1-yl)-7-(trifluoromethyl)-1H-indazol-3-yl]benzene-1,3-diol, Estrogen receptor
著者Bruning, J, Parent, A.A, Gil, G, Zhao, M, Nowak, J, Pace, M.C, Smith, C.L, Afonine, P.V, Adams, P.D, Katzenellenbogen, J.A, Nettles, K.W.
登録日2010-09-08
公開日2010-11-10
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.296 Å)
主引用文献Coupling of receptor conformation and ligand orientation determine graded activity.
Nat.Chem.Biol., 6, 2010
3KFB
DownloadVisualize
BU of 3kfb by Molmil
Crystal structure of a group II chaperonin from Methanococcus maripaludis
分子名称: Chaperonin, MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER
著者Pereira, J.H, Ralston, C.Y, Douglas, N, Meyer, D, Knee, K.M, Goulet, D.R, King, J.A, Frydman, J, Adams, P.D.
登録日2009-10-27
公開日2010-06-23
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献Crystal structures of a group II chaperonin reveal the open and closed states associated with the protein folding cycle.
J.Biol.Chem., 285, 2010
3KFE
DownloadVisualize
BU of 3kfe by Molmil
Crystal structures of a group II chaperonin from Methanococcus maripaludis
分子名称: ADENOSINE-5'-DIPHOSPHATE, Chaperonin, MAGNESIUM ION, ...
著者Pereira, J.H, Ralston, C.Y, Douglas, N, Meyer, D, Knee, K.M, Goulet, D.R, King, J.A, Frydman, J, Adams, P.D.
登録日2009-10-27
公開日2010-06-23
最終更新日2021-10-13
実験手法X-RAY DIFFRACTION (3.5 Å)
主引用文献Crystal structures of a group II chaperonin reveal the open and closed states associated with the protein folding cycle.
J.Biol.Chem., 285, 2010
3PFX
DownloadVisualize
BU of 3pfx by Molmil
Crystal structure of Cel7A from Talaromyces emersonii in complex with cellobiose
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Cellobiohydrolase 1 catalytic domain, SULFATE ION, ...
著者Qin, L, Pereira, J.H, McAndrew, R.P, Simmons, B.A, Sapra, R, Adams, P.D, Sale, K.L.
登録日2010-10-29
公開日2011-11-02
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (1.2616 Å)
主引用文献Crystal structure of Cel7A from Talaromyces emersonii in complex with cellobiose
TO BE PUBLISHED
3PFZ
DownloadVisualize
BU of 3pfz by Molmil
Crystal structure of Cel7A from Talaromyces emersonii in complex with cellotetraose
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Cellobiohydrolase 1 catalytic domain, SULFATE ION, ...
著者Qin, L, Pereira, J.H, McAndrew, R.P, Simmons, B.A, Sapra, R, Adams, P.D, Sale, K.L.
登録日2010-10-29
公開日2011-11-02
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (1.0993 Å)
主引用文献Crystal structure of Cel7A from Talaromyces emersonii in complex with cellotetraose
TO BE PUBLISHED
3SDR
DownloadVisualize
BU of 3sdr by Molmil
Structure of a three-domain sesquiterpene synthase: a prospective target for advanced biofuels production
分子名称: Alpha-bisabolene synthase, CHLORIDE ION, MAGNESIUM ION, ...
著者McAndrew, R.P, Peralta-Yahya, P.P, DeGiovanni, A, Pereira, J.H, Hadi, M.Z, Keasling, J.D, Adams, P.D.
登録日2011-06-09
公開日2011-12-14
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.86 Å)
主引用文献Structure of a three-domain sesquiterpene synthase: a prospective target for advanced biofuels production.
Structure, 19, 2011
3SDT
DownloadVisualize
BU of 3sdt by Molmil
Structure of a three-domain sesquiterpene synthase: a prospective target for advanced biofuels production
分子名称: 4-AMINO-1-HYDROXYBUTANE-1,1-DIYLDIPHOSPHONATE, Alpha-bisabolene synthase, CHLORIDE ION, ...
著者McAndrew, R.P, Peralta-Yahya, P.P, DeGiovanni, A, Pereira, J.H, Hadi, M.Z, Keasling, J.D, Adams, P.D.
登録日2011-06-09
公開日2011-12-14
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.89 Å)
主引用文献Structure of a three-domain sesquiterpene synthase: a prospective target for advanced biofuels production.
Structure, 19, 2011
3SDV
DownloadVisualize
BU of 3sdv by Molmil
Structure of a three-domain sesquiterpene synthase: a prospective target for advanced biofuels production
分子名称: (1-hydroxyethane-1,1-diyl)bis(phosphonic acid), Alpha-bisabolene synthase, CHLORIDE ION, ...
著者McAndrew, R.P, Peralta-Yahya, P.P, DeGiovanni, A, Pereira, J.H, Hadi, M.Z, Keasling, J.D, Adams, P.D.
登録日2011-06-09
公開日2011-12-14
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structure of a three-domain sesquiterpene synthase: a prospective target for advanced biofuels production.
Structure, 19, 2011
3SAE
DownloadVisualize
BU of 3sae by Molmil
Structure of a three-domain sesquiterpene synthase: a prospective target for advanced biofuels production
分子名称: Alpha-bisabolene synthase, CHLORIDE ION, GLYCEROL, ...
著者McAndrew, R.P, Peralta-Yahya, P.P, DeGiovanni, A, Pereira, J.H, Hadi, M.Z, Keasling, J.D, Adams, P.D.
登録日2011-06-02
公開日2011-12-14
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.96 Å)
主引用文献Structure of a three-domain sesquiterpene synthase: a prospective target for advanced biofuels production.
Structure, 19, 2011
3SDQ
DownloadVisualize
BU of 3sdq by Molmil
Structure of a three-domain sesquiterpene synthase: a prospective target for advanced biofuels production
分子名称: Alpha-bisabolene synthase, CHLORIDE ION, GLYCEROL
著者McAndrew, R.P, Peralta-Yahya, P.P, DeGiovanni, A, Pereira, J.H, Hadi, M.Z, Keasling, J.D, Adams, P.D.
登録日2011-06-09
公開日2011-12-14
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.14 Å)
主引用文献Structure of a three-domain sesquiterpene synthase: a prospective target for advanced biofuels production.
Structure, 19, 2011
3SDU
DownloadVisualize
BU of 3sdu by Molmil
Structure of a three-domain sesquiterpene synthase: a prospective target for advanced biofuels production
分子名称: Alpha-bisabolene synthase, CHLORIDE ION, GERANYL S-THIOLODIPHOSPHATE, ...
著者McAndrew, R.P, Peralta-Yahya, P.P, DeGiovanni, A, Pereira, J.H, Hadi, M.Z, Keasling, J.D, Adams, P.D.
登録日2011-06-09
公開日2011-12-14
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.89 Å)
主引用文献Structure of a three-domain sesquiterpene synthase: a prospective target for advanced biofuels production.
Structure, 19, 2011
3TX8
DownloadVisualize
BU of 3tx8 by Molmil
Crystal structure of a succinyl-diaminopimelate desuccinylase (ArgE) from Corynebacterium glutamicum ATCC 13032 at 2.97 A resolution
分子名称: CHLORIDE ION, PHOSPHATE ION, Succinyl-diaminopimelate desuccinylase
著者Joint Center for Structural Genomics (JCSG), Brunger, A.T, Terwilliger, T.C, Read, R.J, Adams, P.D, Levitt, M, Schroder, G.F.
登録日2011-09-22
公開日2011-10-26
最終更新日2023-12-06
実験手法X-RAY DIFFRACTION (2.972 Å)
主引用文献Application of DEN refinement and automated model building to a difficult case of molecular-replacement phasing: the structure of a putative succinyl-diaminopimelate desuccinylase from Corynebacterium glutamicum.
Acta Crystallogr.,Sect.D, 68, 2012
3RUW
DownloadVisualize
BU of 3ruw by Molmil
Crystal structure of Cpn-rls in complex with ADP-AlFx from Methanococcus maripaludis
分子名称: ADENOSINE-5'-DIPHOSPHATE, ALUMINUM FLUORIDE, Chaperonin, ...
著者Pereira, J.H, Ralston, C.Y, Douglas, N.R, Kumar, R, McAndrew, R.P, Knee, K.M, King, J.A, Frydman, J, Adams, P.D.
登録日2011-05-05
公開日2012-01-04
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.702 Å)
主引用文献Mechanism of nucleotide sensing in group II chaperonins.
Embo J., 31, 2012
3RUV
DownloadVisualize
BU of 3ruv by Molmil
Crystal structure of Cpn-rls in complex with ATP analogue from Methanococcus maripaludis
分子名称: Chaperonin, MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, ...
著者Pereira, J.H, Ralston, C.Y, Douglas, N.R, Kumar, R, McAndrew, R.P, Knee, K.M, King, J.A, Frydman, J, Adams, P.D.
登録日2011-05-05
公開日2012-01-04
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.242 Å)
主引用文献Mechanism of nucleotide sensing in group II chaperonins.
Embo J., 31, 2012
3RUQ
DownloadVisualize
BU of 3ruq by Molmil
Crystal structure of Cpn-WT in complex with ADP from Methanococcus maripaludis
分子名称: ADENOSINE-5'-DIPHOSPHATE, Chaperonin, MAGNESIUM ION
著者Pereira, J.H, Ralston, C.Y, Douglas, N.R, Kumar, R, McAndrew, R.P, Knee, K.M, Frydman, J, Adams, P.D.
登録日2011-05-05
公開日2012-01-04
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.798 Å)
主引用文献Mechanism of nucleotide sensing in group II chaperonins.
Embo J., 31, 2012
3RUS
DownloadVisualize
BU of 3rus by Molmil
Crystal structure of Cpn-rls in complex with ADP from Methanococcus maripaludis
分子名称: ADENOSINE-5'-DIPHOSPHATE, Chaperonin, MAGNESIUM ION, ...
著者Pereira, J.H, Ralston, C.Y, Douglas, N.R, Kumar, R, McAndrew, R.P, Knee, K.M, King, J.A, Frydman, J, Adams, P.D.
登録日2011-05-05
公開日2012-01-04
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.338 Å)
主引用文献Mechanism of nucleotide sensing in group II chaperonins.
Embo J., 31, 2012
4NBT
DownloadVisualize
BU of 4nbt by Molmil
Crystal structure of FabG from Acholeplasma laidlawii
分子名称: 3-oxoacyl-[acyl-carrier-protein] reductase, NICOTINAMIDE-ADENINE-DINUCLEOTIDE
著者Pereira, J.H, Mcandrew, R.P, Javidpour, P, Beller, H.R, Adams, P.D.
登録日2013-10-23
公開日2013-12-04
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.48 Å)
主引用文献Biochemical and Structural Studies of NADH-Dependent FabG Used To Increase the Bacterial Production of Fatty Acids under Anaerobic Conditions.
Appl.Environ.Microbiol., 80, 2014

222624

件を2024-07-17に公開中

PDB statisticsPDBj update infoContact PDBjnumon