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PDB: 263 件

3EEX
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The crystal structure of OspA mutant
分子名称: HEXAETHYLENE GLYCOL, Outer Surface Protein A
著者Makabe, K, Biancalana, M, Koide, S.
登録日2008-09-06
公開日2009-09-08
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.49 Å)
主引用文献Minimalist design of water-soluble cross-{beta} architecture.
Proc.Natl.Acad.Sci.USA, 107, 2010
6J48
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Glycine mutation on single layer beta-sheet of OspAsm1
分子名称: Outer surface protein A, TETRAETHYLENE GLYCOL
著者Makabe, K, Hori, Y.
登録日2019-01-08
公開日2019-03-06
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.201 Å)
主引用文献Grafting a short chameleon sequence from alpha B crystallin into a beta-sheet scaffold protein.
Proteins, 87, 2019
6J47
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OspA variant with a short chameleon sequence from alpha B crystallin
分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Outer surface protein A, TETRAETHYLENE GLYCOL
著者Makabe, K, Hori, Y.
登録日2019-01-08
公開日2019-03-06
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Grafting a short chameleon sequence from alpha B crystallin into a beta-sheet scaffold protein.
Proteins, 87, 2019
6J49
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Grafting VLADV sequence into OspAsm1
分子名称: Outer surface protein A, TETRAETHYLENE GLYCOL
著者Makabe, K, Hori, Y.
登録日2019-01-08
公開日2019-03-06
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Grafting a short chameleon sequence from alpha B crystallin into a beta-sheet scaffold protein.
Proteins, 87, 2019
1J1R
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Structure of Pokeweed Antiviral Protein from Seeds (PAP-S1) Complexed with Adenine
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, ADENINE, Antiviral Protein S
著者Watanabe, K, Sato, E, Honjo, E, Motoshima, H, Kurokawa, H, Mikami, B, Monzingo, A.F, Robertus, J.D, Fujii, H, Hidaka, A.
登録日2002-12-14
公開日2004-02-03
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Crystal Structure of Pokweed Antiviral Protein from Seeds (PAP-S1) at 1.8 Angstrom Resolution
To be published
1GP9
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A New Crystal Form of the Nk1 Splice Variant of Hgf/Sf Demonstrates Extensive Hinge Movement and Suggests that the Nk1 Dimer Originates by Domain Swapping
分子名称: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, HEPATOCYTE GROWTH FACTOR
著者Watanabe, K, Chirgadze, D.Y, Lietha, D, Gherardi, E, Blundell, T.L.
登録日2001-10-31
公開日2001-11-19
最終更新日2024-10-23
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献A New Crystal Form of the Nk1 Splice Variant of Hgf/Sf Demonstrates Extensive Hinge Movement and Suggests that the Nk1 Dimer Originates by Domain Swapping
J.Mol.Biol., 319, 2002
1J1M
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Ricin A-Chain (Recombinant) at 100K
分子名称: Ricin, SULFATE ION, alpha-D-glucopyranose-(1-1)-alpha-D-glucopyranose
著者Watanabe, K, Motoshima, H.
登録日2002-12-10
公開日2004-02-03
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Ricin A-Chain (Recombinant) at 100K
To be published
1J1Q
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Structure of Pokeweed Antiviral Protein from Seeds (PAP-S1)
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Antiviral protein S
著者Watanabe, K, Sato, E, Honjo, E, Motoshima, H, Kurokawa, H, Mikami, B, Monzingo, A.F, Robertus, J.D, Fujii, H, Hidaka, A.
登録日2002-12-14
公開日2004-02-03
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Crystal Structure of Pokweed Antiviral Protein from Seeds (PAP-S1) at 1.8 Angstrom Resolution
To be published
1J1S
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Pokeweed Antiviral Protein from Seeds (PAP-S1) Complexed with Formycin
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Antiviral Protein S, FORMYCIN-5'-MONOPHOSPHATE
著者Watanabe, K, Sato, E, Honjo, E, Motoshima, H, Kurokawa, H, Mikami, B, Monzingo, A.F, Robertus, J.D, Fujii, H, Hidaka, A.
登録日2002-12-14
公開日2004-02-03
最終更新日2024-11-06
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal Structure of Pokweed Antiviral Protein from Seeds (PAP-S1) at 1.8 Angstrom Resolution
To be published
1UOK
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CRYSTAL STRUCTURE OF B. CEREUS OLIGO-1,6-GLUCOSIDASE
分子名称: OLIGO-1,6-GLUCOSIDASE
著者Watanabe, K, Hata, Y, Kizaki, H, Katsube, Y, Suzuki, Y.
登録日1998-07-28
公開日1999-02-16
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献The refined crystal structure of Bacillus cereus oligo-1,6-glucosidase at 2.0 A resolution: structural characterization of proline-substitution sites for protein thermostabilization.
J.Mol.Biol., 269, 1997
1V6A
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Crystal Structure of L-lactate dehydrogenase from Cyprinus carpio
分子名称: L-lactate dehydrogenase A chain, alpha-D-glucopyranose-(1-1)-alpha-D-glucopyranose
著者Watanabe, K, Motoshima, H.
登録日2003-11-28
公開日2005-02-15
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Crystal Structure of L-lactate dehydrogenase from Cyprinus carpio
To be Published
7X2B
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Red fluorescent protein from Diadumene lineata
分子名称: Red fluorescent protein, SULFATE ION
著者Makabe, K, Hotta, J, Mizuno, H.
登録日2022-02-25
公開日2023-03-01
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.63 Å)
主引用文献Cloning and structural basis of fluorescent protein color variants from identical species of sea anemone, Diadumene lineata.
Photochem Photobiol Sci, 22, 2023
3VQU
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CRYSTAL STRUCTURE OF HUMAN MPS1 CATALYTIC DOMAIN IN COMPLEX WITH 4-[(4-amino-5-cyano-6-ethoxypyridin-2- yl)amino]benzamide
分子名称: 4-[(4-amino-5-cyano-6-ethoxypyridin-2-yl)amino]benzamide, Dual specificity protein kinase TTK, IODIDE ION
著者Kusakabe, K, Ide, N, Daigo, Y, Itoh, T, Higashino, K, Okano, Y, Tadano, G, Tachibana, Y, Sato, Y, Inoue, M, Wada, T, Iguchi, M, Kanazawa, T, Ishioka, Y, Dohi, K, Tagashira, S, Kido, Y, Sakamoto, S, Yasuo, K, Maeda, M, Yamamoto, T, Higaki, M, Endoh, T, Ueda, K, Shiota, T, Murai, H, Nakamura, Y.
登録日2012-03-30
公開日2012-06-27
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Diaminopyridine-based potent and selective mps1 kinase inhibitors binding to an unusual flipped-Peptide conformation.
Acs Med.Chem.Lett., 3, 2012
3W1F
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Crystal structure of Human MPS1 catalytic domain in complex with 5-(5-ethoxy-6-(1-methyl-1H-pyrazol-4-yl)-1H-indazol-3-yl)-2-methylbenzenesulfonamide
分子名称: 5-[5-ethoxy-6-(1-methyl-1H-pyrazol-4-yl)-1H-indazol-3-yl]-2-methylbenzenesulfonamide, Dual specificity protein kinase TTK
著者Kusakabe, K, Ide, N, Daigo, Y, Tachibana, Y, Itoh, T, Yamamoto, T, Hashizume, H, Hato, Y, Higashino, K, Okano, Y, Sato, Y, Inoue, M, Iguchi, M, Kanazawa, T, Ishioka, Y, Dohi, K, Kido, Y, Sakamoto, S, Yasuo, K, Maeda, M, Higaki, M, Ueda, K, Yoshizawa, H, Baba, Y, Shiota, T, Murai, H, Nakamura, Y.
登録日2012-11-14
公開日2013-06-26
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Indazole-based potent and cell-active Mps1 kinase inhibitors: rational design from pan-kinase inhibitor anthrapyrazolone (SP600125)
J.Med.Chem., 56, 2013
3S96
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Crystal structure of 3B5H10
分子名称: 3B5H10 FAB heavy chain, 3B5H10 FAB light chain
著者Weisgraber, K, Peters-Libeu, C, Rutenber, E, Newhouse, Y, Finkbeiner, S.
登録日2011-05-31
公開日2012-02-15
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Disease-associated polyglutamine stretches in monomeric huntingtin adopt a compact structure.
J.Mol.Biol., 421, 2012
2OL7
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The crystal structure of OspA mutant
分子名称: Outer surface protein A
著者Makabe, K, Terechko, V, Koide, S.
登録日2007-01-18
公開日2007-12-11
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.35 Å)
主引用文献beta-Strand Flipping and Slipping Triggered by Turn Replacement Reveal the Opportunistic Nature of beta-Strand Pairing
J.Am.Chem.Soc., 129, 2007
2OL6
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The crystal structure of OspA mutant
分子名称: Outer surface protein A
著者Makabe, K, Terechko, V, Koide, S.
登録日2007-01-18
公開日2007-12-11
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献beta-Strand Flipping and Slipping Triggered by Turn Replacement Reveal the Opportunistic Nature of beta-Strand Pairing
J.Am.Chem.Soc., 129, 2007
2FKG
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The Crystal Structure of Engineered OspA
分子名称: Outer Surface Protein A
著者Makabe, K, Terechko, V, Gawlak, G, Yan, S, Koide, S.
登録日2006-01-04
公開日2006-11-21
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Atomic structures of peptide self-assembly mimics.
Proc.Natl.Acad.Sci.Usa, 103, 2006
2G8C
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Atomic-resolution crystal structure of Borrelia burgdorferi OspA via surface entropy reduction
分子名称: IMIDAZOLE, TETRAETHYLENE GLYCOL, outer surface protein A
著者Makabe, K, Tereshko, V, Koide, S.
登録日2006-03-02
公開日2006-08-08
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.15 Å)
主引用文献Atomic-resolution crystal structure of Borrelia burgdorferi outer surface protein A via surface engineering.
Protein Sci., 15, 2006
2HKD
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The crystal structure of engineered OSPA
分子名称: Outer Surface Protein A, TETRAETHYLENE GLYCOL
著者Makabe, K, Terechko, V, Koide, S.
登録日2006-07-03
公開日2006-11-21
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Atomic structures of peptide self-assembly mimics.
Proc.Natl.Acad.Sci.Usa, 103, 2006
2FKJ
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The crystal structure of engineered OspA
分子名称: Outer Surface Protein A
著者Makabe, K, Terechko, V, Gawlak, G, Yan, S, Koide, S.
登録日2006-01-04
公開日2006-11-21
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (3.1 Å)
主引用文献Atomic structures of peptide self-assembly mimics.
Proc.Natl.Acad.Sci.Usa, 103, 2006
2I5V
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Crystal structure of OspA mutant
分子名称: Outer surface protein A, TETRAETHYLENE GLYCOL
著者Makabe, K, Terechko, V, Koide, S.
登録日2006-08-25
公開日2007-12-25
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.1 Å)
主引用文献High-Resolution Structure of a Self-Assembly-Competent Form of a Hydrophobic Peptide Captured in a Soluble β-Sheet Scaffold.
J.Mol.Biol., 378, 2008
2I5Z
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The crystal structure of OspA mutant
分子名称: Outer surface protein A, TETRAETHYLENE GLYCOL
著者Makabe, K, Terechko, V, Koide, S.
登録日2006-08-26
公開日2007-07-10
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.2 Å)
主引用文献Hydrophobic surface burial is the major stability determinant of a flat, single-layer beta-sheet.
J.Mol.Biol., 368, 2007
1EQK
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SOLUTION STRUCTURE OF ORYZACYSTATIN-I, A CYSTEINE PROTEINASE INHIBITOR OF THE RICE, ORYZA SATIVA L. JAPONICA
分子名称: ORYZACYSTATIN-I
著者Nagata, K, Kudo, N, Abe, K, Arai, S, Tanokura, M.
登録日2000-04-05
公開日2001-01-10
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Three-dimensional solution structure of oryzacystatin-I, a cysteine proteinase inhibitor of the rice, Oryza sativa L. japonica.
Biochemistry, 39, 2000
5XXL
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Crystal structure of GH3 beta-glucosidase from Bacteroides thetaiotaomicron
分子名称: DI(HYDROXYETHYL)ETHER, MAGNESIUM ION, Periplasmic beta-glucosidase, ...
著者Nakajima, M, Ishiguro, R, Tanaka, N, Abe, K, Maeda, T, Miyanaga, A, Takahash, Y, Sugimoto, N, Nakai, H, Taguchi, H.
登録日2017-07-04
公開日2017-12-13
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Function and structure relationships of a beta-1,2-glucooligosaccharide-degrading beta-glucosidase.
FEBS Lett., 591, 2017

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