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PDB: 1209 results

1DNH
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THE MOLECULAR STRUCTURE OF THE COMPLEX OF HOECHST 33258 AND THE DNA DODECAMER D(CGCGAATTCGCG)
Descriptor: 2'-(4-HYDROXYPHENYL)-5-(4-METHYL-1-PIPERAZINYL)-2,5'-BI-BENZIMIDAZOLE, DNA (5'-D(*CP*GP*CP*GP*AP*AP*TP*TP*CP*GP*CP*G)-3')
Authors:Teng, M.-K, Usman, N, Frederick, C.A, Wang, A.H.-J.
Deposit date:1988-02-16
Release date:1989-01-09
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:The molecular structure of the complex of Hoechst 33258 and the DNA dodecamer d(CGCGAATTCGCG).
Nucleic Acids Res., 16, 1988
1DNX
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RNA/DNA DODECAMER R(G)D(CGTATACGC) WITH MAGNESIUM BINDING SITES
Descriptor: DNA/RNA (5'-R(*GP)-D(*CP*GP*TP*AP*TP*AP*CP*GP*C)-3'), MAGNESIUM ION
Authors:Robinson, H, Gao, Y.-G, Sanishvili, R, Joachimiak, A, Wang, A.H.-J.
Deposit date:1999-12-16
Release date:2000-04-10
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Hexahydrated magnesium ions bind in the deep major groove and at the outer mouth of A-form nucleic acid duplexes.
Nucleic Acids Res., 28, 2000
2GSJ
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cDNA cloning and 1.75A crystal structure determination of PPL2, a novel chimerolectin from Parkia platycephala seeds exhibiting endochitinolytic activity
Descriptor: SULFATE ION, protein PPL-2
Authors:Cavada, B.S, Moreno, F.B, da Rocha, B.A, de Azevedo Jr, W.F, Castellon, R.E.R, Goersch, G.V, Nagano, C.S, de Souza, E.P, Nascimento, K.S, Radis-Baptista, G, Delatorre, P, Leroy, Y, Toyama, M.H, Pinto, V.P, Sampaio, A.H, Barettino, D, Debray, H, Calvete, J.J, Sanz, L.
Deposit date:2006-04-26
Release date:2007-03-13
Last modified:2017-10-18
Method:X-RAY DIFFRACTION (1.73 Å)
Cite:cDNA cloning and 1.75 A crystal structure determination of PPL2, an endochitinase and N-acetylglucosamine-binding hemagglutinin from Parkia platycephala seeds
Febs J., 273, 2006
1FY2
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Aspartyl Dipeptidase
Descriptor: ASPARTYL DIPEPTIDASE, CADMIUM ION
Authors:Hakansson, K, Wang, A.H.-J, Miller, C.G.
Deposit date:2000-09-28
Release date:2001-01-10
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:The structure of aspartyl dipeptidase reveals a unique fold with a Ser-His-Glu catalytic triad.
Proc.Natl.Acad.Sci.USA, 97, 2000
1FYE
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Aspartyl Dipeptidase (Anisotropic B-Factor Refinement)
Descriptor: ASPARTYL DIPEPTIDASE, CADMIUM ION
Authors:Hakansson, K, Wang, A.H.-J, Miller, C.G.
Deposit date:2000-09-29
Release date:2001-01-10
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:The structure of aspartyl dipeptidase reveals a unique fold with a Ser-His-Glu catalytic triad.
Proc.Natl.Acad.Sci.USA, 97, 2000
1H9W
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Native Dioclea Guianensis seed lectin
Descriptor: CALCIUM ION, MANGANESE (II) ION, SEED LECTIN
Authors:Romero, A, Wah, D.A, Sol, F.G.D, Cavada, B.S, Ramos, M.V, Grangeiro, T.B, Sampaio, A.H, Calvete, J.J.
Deposit date:2001-03-22
Release date:2001-03-23
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal Structure of Native and Cd/Cd-Substituted Dioclea Guianensis Seed Lectin. A Novel Manganese-Binding Site and Structural Basis of Dimer-Tetramer Association
J.Mol.Biol., 310, 2001
1GKH
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MUTANT K69H OF GENE V PROTEIN (SINGLE-STRANDED DNA BINDING PROTEIN)
Descriptor: GENE V PROTEIN
Authors:Su, S, Gao, Y.-G, Zhang, H, Terwilliger, T.C, Wang, A.H.-J.
Deposit date:1997-03-04
Release date:1997-09-04
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Analyses of the stability and function of three surface mutants (R82C, K69H, and L32R) of the gene V protein from Ff phage by X-ray crystallography.
Protein Sci., 6, 1997
1FU9
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SOLUTION STRUCTURE OF THE NINTH ZINC-FINGER DOMAIN OF THE U-SHAPED TRANSCRIPTION FACTOR
Descriptor: U-SHAPED TRANSCRIPTIONAL COFACTOR, ZINC ION
Authors:Liew, C.K, Kowalski, K, Fox, A.H, Newton, A, Sharpe, B.K, Crossley, M, Mackay, J.P.
Deposit date:2000-09-14
Release date:2000-10-04
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Solution structures of two CCHC zinc fingers from the FOG family protein U-shaped that mediate protein-protein interactions.
Structure Fold.Des., 8, 2000
2LFN
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Identification of the key regions that drive functional amyloid formation by the fungal hydrophobin EAS
Descriptor: Hydrophobin
Authors:Macindoe, I, Kwan, A.H, Morris, V.K, Mackay, J.P, Sunde, M.
Deposit date:2011-07-06
Release date:2012-01-25
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Self-assembly of functional, amphipathic amyloid monolayers by the fungal hydrophobin EAS
Proc.Natl.Acad.Sci.USA, 109, 2012
2L4Z
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NMR structure of fusion of CtIP (641-685) to LMO4-LIM1 (18-82)
Descriptor: DNA endonuclease RBBP8,LIM domain transcription factor LMO4, ZINC ION
Authors:Liew, C, Stokes, P.H, Kwan, A.H, Matthews, J.M.
Deposit date:2010-10-22
Release date:2011-10-26
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Structural Basis of the Interaction of the Breast Cancer Oncogene LMO4 with the Tumour Suppressor CtIP/RBBP8.
J.Mol.Biol., 425, 2013
1H9P
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Crystal Structure of Dioclea guianensis Seed Lectin
Descriptor: CADMIUM ION, LECTIN ALPHA CHAIN, MANGANESE (II) ION
Authors:Romero, A, Wah, D.A, Gallego Del sol, F, Cavada, B.S, Ramos, M.V, Grangeiro, T.B, Sampaio, A.H, Calvete, J.J.
Deposit date:2001-03-16
Release date:2001-03-23
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal Structure of Native and Cd/Cd-Substituted Dioclea Guianensis Seed Lectin. A Novel Manganese-Binding Site and Structural Basis of Dimer-Tetramer Association
J.Mol.Biol., 310, 2001
1GXF
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CRYSTAL STRUCTURE OF TRYPANOSOMA CRUZI TRYPANOTHIONE REDUCTASE IN COMPLEX WITH THE INHIBITOR QUINACRINE MUSTARD
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, MALEIC ACID, QUINACRINE MUSTARD, ...
Authors:Bond, C.S, Peterson, M.R, Vickers, T.J, Fairlamb, A.H, Hunter, W.N.
Deposit date:2002-04-04
Release date:2004-05-06
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Two Interacting Binding Sites for Quinacrine Derivatives in the Active Site of Trypanothione Reductase: A Template for Drug Design
J.Biol.Chem., 279, 2004
2L5U
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Structure of the first PHD finger (PHD1) from CHD4 (Mi2b)
Descriptor: Chromodomain-helicase-DNA-binding protein 4, ZINC ION
Authors:Mansfield, R.E, Kwan, A.H, Mackay, J.P.
Deposit date:2010-11-08
Release date:2011-01-19
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Plant Homeodomain (PHD) Fingers of CHD4 Are Histone H3-binding Modules with Preference for Unmodified H3K4 and Methylated H3K9
J.Biol.Chem., 286, 2011
2L2G
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Solution structure of Opossum Domain 11
Descriptor: IGF2R DOMAIN 11
Authors:Williams, C, Hoppe, H, Rezgui, D, Rezgui, M, Frago, S, Ellis, R.Z, Wattana-Amorn, P, Prince, S.N, Zaccheo, O.J, Forbes, B, Jones, E.Y, Crump, M.P, Bassim, A.H.
Deposit date:2010-08-18
Release date:2012-02-15
Last modified:2015-02-25
Method:SOLUTION NMR
Cite:An exon splice enhancer primes IGF2:IGF2R binding site structure and function evolution.
Science, 338, 2012
2LMJ
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Itk-sh3
Descriptor: Tyrosine-protein kinase ITK/TSK
Authors:Kristiansen, P, Bie Andersen, T, Huszenicza, Z, Andreotti, A.H, Spurkland, A.
Deposit date:2011-12-05
Release date:2012-12-05
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:The SH3 domains of the Tec family kinase Itk and the Src family kinase Lck compete for adjacent sites on T-cell specific adapter protein
To be Published
2L66
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The DNA-recognition fold of Sso7c4 suggests a new member of SpoVT-AbrB superfamily from archaea.
Descriptor: Transcriptional regulator, AbrB family
Authors:Hsu, C.-H, Wang, A.H.-J.
Deposit date:2010-11-17
Release date:2011-09-07
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:The DNA-recognition fold of Sso7c4 suggests a new member of SpoVT-AbrB superfamily from archaea.
Nucleic Acids Res., 39, 2011
2R25
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Complex of YPD1 and SLN1-R1 with bound Mg2+ and BeF3-
Descriptor: BERYLLIUM TRIFLUORIDE ION, MAGNESIUM ION, Osmosensing histidine protein kinase SLN1, ...
Authors:Copeland, D.M, Zhao, X, Soares, A.S, West, A.H.
Deposit date:2007-08-24
Release date:2008-01-15
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystal structure of a complex between the phosphorelay protein YPD1 and the response regulator domain of SLN1 bound to a phosphoryl analog
J.Mol.Biol., 375, 2008
2R8N
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Structural Analysis of the Unbound Form of HIV-1 Subtype C Protease
Descriptor: GLYCEROL, Pol protein
Authors:Coman, R.M, Robbins, A.H, McKenna, R, Dunn, B.M.
Deposit date:2007-09-11
Release date:2008-07-29
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:High-resolution structure of unbound human immunodeficiency virus 1 subtype C protease: implications of flap dynamics and drug resistance.
Acta Crystallogr.,Sect.D, 64, 2008
128D
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MOLECULAR STRUCTURE OF D(CGC[E6G]AATTCGCG) COMPLEXED WITH HOECHST 33258
Descriptor: 2'-(4-HYDROXYPHENYL)-5-(4-METHYL-1-PIPERAZINYL)-2,5'-BI-BENZIMIDAZOLE, DNA (5'-D(*CP*GP*CP*(G36)P*AP*AP*TP*TP*CP*GP*CP*G)-3')
Authors:Sriram, M, Van Der Marel, G.A, Roelen, H.L.P.F, Van Boom, J.H, Wang, A.H.-J.
Deposit date:1993-06-30
Release date:1994-01-15
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Conformation of B-DNA containing O6-ethyl-G-C base pairs stabilized by minor groove binding drugs: molecular structure of d(CGC[e6G]AATTCGCG complexed with Hoechst 33258 or Hoechst 33342.
EMBO J., 11, 1992
129D
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DNA (5'-D(*CP*GP*CP*GP*AP*AP*TP*TP*CP*GP*CP*G)-3') COMPLEXED WITH HOECHST 33342
Descriptor: 2'-(4-ETHOXYPHENYL)-5-(4-METHYL-1-PIPERAZINYL)-2,5'-BI-BENZIMIDAZOLE, DNA (5'-D(*CP*GP*CP*GP*AP*AP*TP*TP*CP*GP*CP*G)-3')
Authors:Sriram, M, Van Der Marel, G.A, Roelen, H.L.P.F, Van Boom, J.H, Wang, A.H.-J.
Deposit date:1993-06-30
Release date:1994-01-15
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Conformation of B-DNA containing O6-ethyl-G-C base pairs stabilized by minor groove binding drugs: molecular structure of d(CGC[e6G]AATTCGCG complexed with Hoechst 33258 or Hoechst 33342.
EMBO J., 11, 1992
127D
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DNA (5'-D(*CP*GP*CP*GP*AP*AP*TP*TP*CP*GP*CP*G)-3') COMPLEXED WITH HOECHST 33258
Descriptor: 2'-(4-HYDROXYPHENYL)-5-(4-METHYL-1-PIPERAZINYL)-2,5'-BI-BENZIMIDAZOLE, DNA (5'-D(*CP*GP*CP*GP*AP*AP*TP*TP*CP*GP*CP*G)-3')
Authors:Sriram, M, Van Der Marel, G.A, Roelen, H.L.P.F, Van Boom, J.H, Wang, A.H.-J.
Deposit date:1993-06-30
Release date:1994-01-15
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2 Å)
Cite:Conformation of B-DNA containing O6-ethyl-G-C base pairs stabilized by minor groove binding drugs: molecular structure of d(CGC[e6G]AATTCGCG complexed with Hoechst 33258 or Hoechst 33342.
EMBO J., 11, 1992
130D
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MOLECULAR STRUCTURE OF D(CGC[E6G]AATTCGCG) COMPLEXED WITH HOECHST 33342
Descriptor: 2'-(4-ETHOXYPHENYL)-5-(4-METHYL-1-PIPERAZINYL)-2,5'-BI-BENZIMIDAZOLE, DNA (5'-D(*CP*GP*CP*(G36)P*AP*AP*TP*TP*CP*GP*CP*G)-3')
Authors:Sriram, M, Van Der Marel, G.A, Roelen, H.L.P.F, Van Boom, J.H, Wang, A.H.-J.
Deposit date:1993-06-30
Release date:1994-01-15
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Conformation of B-DNA containing O6-ethyl-G-C base pairs stabilized by minor groove binding drugs: molecular structure of d(CGC[e6G]AATTCGCG complexed with Hoechst 33258 or Hoechst 33342.
EMBO J., 11, 1992
2R9B
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Structural Analysis of Plasmepsin 2 from Plasmodium falciparum complexed with a peptide-based inhibitor
Descriptor: Plasmepsin-2, peptide-based inhibitor
Authors:Liu, P, Marzahn, M.R, Robbins, A.H, McKenna, R, Dunn, B.M.
Deposit date:2007-09-12
Release date:2007-11-27
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Recombinant plasmepsin 1 from the human malaria parasite plasmodium falciparum: enzymatic characterization, active site inhibitor design, and structural analysis.
Biochemistry, 48, 2009
144D
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MINOR GROOVE BINDING OF SN6999 TO AN ALKYLATED DNA: MOLECULAR STRUCTURE OF D(CGC[E6G]AATTCGCG)-SN6999 COMPLEX
Descriptor: 1-METHYL-4-[4-[4-(4-(1-METHYLQUINOLINIUM)AMINO)BENZAMIDO]ANILINO]PYRIDINIUM, DNA (5'-D(*CP*GP*CP*(G36)P*AP*AP*TP*TP*CP*GP*CP*G)-3')
Authors:Gao, Y.-G, Sriram, M, Denny, W.A, Wang, A.H.-J.
Deposit date:1993-10-26
Release date:1995-05-30
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Minor groove binding of SN6999 to an alkylated DNA: molecular structure of d(CGC[e6G]AATTCGCG)-SN6999 complex.
Biochemistry, 32, 1993
1AE2
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MUTANT L32R OF GENE V PROTEIN (SINGLE-STRANDED DNA BINDING PROTEIN)
Descriptor: GENE V PROTEIN
Authors:Su, S, Gao, Y.-G, Zhang, H, Terwilliger, T.C, Wang, A.H.-J.
Deposit date:1997-03-04
Release date:1997-09-04
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2 Å)
Cite:Analyses of the stability and function of three surface mutants (R82C, K69H, and L32R) of the gene V protein from Ff phage by X-ray crystallography.
Protein Sci., 6, 1997

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