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PDB: 89832 results

3M3M
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BU of 3m3m by Molmil
Crystal structure of glutathione S-transferase from Pseudomonas fluorescens [Pf-5]
Descriptor: 1,2-ETHANEDIOL, GLUTATHIONE, Glutathione S-transferase, ...
Authors:Bagaria, A, Burley, S.K, Swaminathan, S, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2010-03-09
Release date:2010-03-16
Last modified:2021-02-10
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Crystal structure of glutathione S-transferase from Pseudomonas fluorescens [Pf-5]
To be Published
5MGG
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BU of 5mgg by Molmil
Crystal Structure of BAZ2B bromodomain in complex with 4-chloropyridine derivative 3
Descriptor: 4-chloranyl-~{N}-methyl-pyridine-2-carboxamide, Bromodomain adjacent to zinc finger domain protein 2B
Authors:Lolli, G, Spiliotopoulos, D, Caflisch, A.
Deposit date:2016-11-21
Release date:2017-04-12
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Discovery of BAZ2A bromodomain ligands.
Eur J Med Chem, 139, 2017
6P09
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BU of 6p09 by Molmil
Human DNA Ligase 1 Bound to an Adenylated, dideoxy Terminated DNA nick with 200 mM Mg2+
Descriptor: ADENOSINE MONOPHOSPHATE, DI(HYDROXYETHYL)ETHER, DNA (5'-D(*GP*CP*TP*GP*AP*TP*GP*CP*GP*TP*C)-3'), ...
Authors:Schellenberg, M.J, Williams, R.S, Tumbale, P.S, Riccio, A.A.
Deposit date:2019-05-16
Release date:2019-12-11
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.052 Å)
Cite:Two-tiered enforcement of high-fidelity DNA ligation.
Nat Commun, 10, 2019
1VAY
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BU of 1vay by Molmil
Crystal Structure of Uricase from Arthrobacter globiformis with inhibitor 8-azaxanthine
Descriptor: 8-AZAXANTHINE, Uric acid oxidase
Authors:Hossain, M.T, Suzuki, K, Yamamoto, T, Imamura, S, Sekiguchi, T, Takenaka, A.
Deposit date:2004-02-19
Release date:2005-06-28
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.24 Å)
Cite:Crystal Structure of Uricase from Arthrobacter Globiformis Complexed with an inhibitor 8-Azaxanthine
To be Published
7R1C
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BU of 7r1c by Molmil
Cryo-EM structure of Bacillus megaterium gas vesicles
Descriptor: Gas vesicle structural protein
Authors:Huber, S.T, Evers, W, Jakobi, A.J.
Deposit date:2022-02-02
Release date:2022-06-15
Last modified:2024-07-17
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Cryo-EM structure of gas vesicles for buoyancy-controlled motility.
Cell, 186, 2023
8GJG
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BU of 8gjg by Molmil
De novo design of high-affinity protein binders to bioactive helical peptides
Descriptor: gluc_A04_0005, gluc_A04_0005 Binder
Authors:Leung, P.J.Y, Bera, A.K, Torres, S.V, Baker, D, Kang, A.
Deposit date:2023-03-15
Release date:2024-01-10
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:De novo design of high-affinity binders of bioactive helical peptides.
Nature, 626, 2024
7A01
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BU of 7a01 by Molmil
The Halastavi arva virus intergenic region IRES promotes translation by the simplest possible initiation mechanism
Descriptor: 18S RIBOSOMAL RNA, 28S RIBOSOMAL RNA, 40S RIBOSOMAL PROTEIN ES21, ...
Authors:Abaeva, I, Vicens, Q, Bochler, A, Soufari, H, Simonetti, A, Pestova, T.V, Hashem, Y, Hellen, C.U.T.
Deposit date:2020-08-05
Release date:2020-12-30
Last modified:2024-11-13
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:The Halastavi arva Virus Intergenic Region IRES Promotes Translation by the Simplest Possible Initiation Mechanism.
Cell Rep, 33, 2020
5MGL
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BU of 5mgl by Molmil
Crystal Structure of BAZ2A bromodomain in complex with 4-chloropyridine derivative 3
Descriptor: 4-chloranyl-~{N}-methyl-pyridine-2-carboxamide, Bromodomain adjacent to zinc finger domain protein 2A
Authors:Lolli, G, Spiliotopoulos, D, Caflisch, A.
Deposit date:2016-11-21
Release date:2017-04-12
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.651 Å)
Cite:Discovery of BAZ2A bromodomain ligands.
Eur J Med Chem, 139, 2017
7A1F
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BU of 7a1f by Molmil
Crystal structure of human 5' exonuclease Appollo in complex with 5'dAMP
Descriptor: 2'-DEOXYADENOSINE-5'-MONOPHOSPHATE, 5' exonuclease Apollo, FE (III) ION, ...
Authors:Newman, J.A, Baddock, H.T, Mukhopadhyay, S.M.M, Burgess-Brown, N.A, von Delft, F, Arrowshmith, C.H, Edwards, A, Bountra, C, Gileadi, O.
Deposit date:2020-08-12
Release date:2021-01-20
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:A phosphate binding pocket is a key determinant of exo- versus endo-nucleolytic activity in the SNM1 nuclease family.
Nucleic Acids Res., 49, 2021
7DVH
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BU of 7dvh by Molmil
Crystal structure of the computationally designed reDPBB_sym4 protein
Descriptor: reDPBB_sym4 protein
Authors:Yagi, S, Tagami, S, Padhi, A.K, Zhang, K.Y.J.
Deposit date:2021-01-13
Release date:2021-09-29
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.698 Å)
Cite:Seven Amino Acid Types Suffice to Create the Core Fold of RNA Polymerase.
J.Am.Chem.Soc., 143, 2021
8DYS
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BU of 8dys by Molmil
Crystal structure of human Eukaryotic translation initiation factor 2A (eIF2A)
Descriptor: 1,2-ETHANEDIOL, Eukaryotic translation initiation factor 2A, GLYCEROL, ...
Authors:Righetto, G.L, Zeng, H, Dong, A, Li, Y, Hutchinson, A, Seitova, A, Arrowsmith, C.H, Edwards, A.M, Halabelian, L, Structural Genomics Consortium (SGC)
Deposit date:2022-08-05
Release date:2022-08-17
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structure of human Eukaryotic translation initiation factor 2A (eIF2A)
To Be Published
6YBI
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BU of 6ybi by Molmil
RT structure of HEW Lysozyme obtained at 1.12 A resolution from crystal grown in a Mylar microchip.
Descriptor: CHLORIDE ION, Lysozyme, SODIUM ION
Authors:Gavira, J.A, Martinez-Rodriguez, S.
Deposit date:2020-03-17
Release date:2020-08-12
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (1.12 Å)
Cite:Attaining atomic resolution from in situ data collection at room temperature using counter-diffusion-based low-cost microchips.
Acta Crystallogr D Struct Biol, 76, 2020
2WXQ
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BU of 2wxq by Molmil
The crystal structure of the murine class IA PI 3-kinase p110delta in complex with AS15.
Descriptor: 2-{[3-(2-METHOXYPHENYL)-4-OXO-3,4,5,6,7,8-HEXAHYDROQUINAZOLIN-2-YL]SULFANYL}-N-QUINOXALIN-6-YLACETAMIDE, PHOSPHATIDYLINOSITOL-4,5-BISPHOSPHATE 3-KINASE CATALYTIC SUBUNIT DELTA ISOFORM
Authors:Berndt, A, Miller, S, Williams, O, Lee, D.D, Houseman, B.T, Pacold, J.I, Gorrec, F, Hon, W.-C, Liu, Y, Rommel, C, Gaillard, P, Ruckle, T, Schwarz, M.K, Shokat, K.M, Shaw, J.P, Williams, R.L.
Deposit date:2009-11-09
Release date:2010-01-12
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:The P110D Structure: Mechanisms for Selectivity and Potency of New Pi(3)K Inhibitors
Nat.Chem.Biol., 6, 2010
6YBO
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BU of 6ybo by Molmil
RT structure of Glucose Isomerase obtained at 1.06 A resolution from crystal grown in a Kapton microchip.
Descriptor: MAGNESIUM ION, SODIUM ION, Xylose isomerase
Authors:Gavira, J.A, Martinez-Rodriguez, S.
Deposit date:2020-03-17
Release date:2020-08-12
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.06 Å)
Cite:Attaining atomic resolution from in situ data collection at room temperature using counter-diffusion-based low-cost microchips.
Acta Crystallogr D Struct Biol, 76, 2020
6YBX
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BU of 6ybx by Molmil
RT structure of Thaumatin obtained at 1.14 A resolution from crystal grown in a Mylar microchip.
Descriptor: L(+)-TARTARIC ACID, SODIUM ION, Thaumatin-1
Authors:Gavira, J.A, Martinez-Rodriguez, S.
Deposit date:2020-03-18
Release date:2020-08-12
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (1.14 Å)
Cite:Attaining atomic resolution from in situ data collection at room temperature using counter-diffusion-based low-cost microchips.
Acta Crystallogr D Struct Biol, 76, 2020
3M5T
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BU of 3m5t by Molmil
Fragment tethered to Carbonic Anhydrase II H64C mutant
Descriptor: 3,3-diphenyl-N-(2-sulfanylethyl)propanamide, CARBONATE ION, Carbonic anhydrase 2, ...
Authors:Schulze Wischeler, J, Heine, A, Klebe, G.
Deposit date:2010-03-13
Release date:2011-05-25
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Fragment screening on Carbonic Anhydrase II via Tethering approach
To be Published
5TIE
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BU of 5tie by Molmil
x-ray structure of acyl-CoA thioesterase I, TesA, mutant M141L/Y145K/L146K at pH 7.5 in complex with octanoic acid
Descriptor: Acyl-CoA thioesterase I, OCTANOIC ACID (CAPRYLIC ACID)
Authors:Thoden, J.B, Holden, H.M, Grisewood, M.J, Hernandez Lozada, N.J, Gifford, N.P, Mendez-Perez, D, Schoenberger, H.A, Allan, M.F, Pfleger, B.F, Marines, C.D.
Deposit date:2016-10-02
Release date:2017-04-26
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.15 Å)
Cite:Computational Redesign of Acyl-ACP Thioesterase with Improved Selectivity toward Medium-Chain-Length Fatty Acids.
ACS Catal, 7, 2017
8DTR
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BU of 8dtr by Molmil
Crystal structure of SARS-CoV-2 spike stem helix peptide in complex with neutralizing antibody COV30-14
Descriptor: COV30-14 heavy chain, COV30-14 light chain, Spike protein S2' stem helix peptide
Authors:Lee, C.C.D, Lin, T.H, Wilson, I.A.
Deposit date:2022-07-26
Release date:2022-11-23
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Rare, convergent antibodies targeting the stem helix broadly neutralize diverse betacoronaviruses.
Cell Host Microbe, 31, 2023
6LR6
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BU of 6lr6 by Molmil
The crystal structure of human cytoplasmic LRS
Descriptor: 4-Chloro-3-aminomethyl-7-[ethoxy]-3H-benzo[C][1,2]oxaborol-1-ol modified adenosine, 5'-O-(L-leucylsulfamoyl)adenosine, Leucine--tRNA ligase, ...
Authors:Liu, R.J, Long, T, Li, H, Li, J, Zhao, J.H, Lin, J.Z, Palencia, A, Wang, M.Z, Cusack, S, Wang, E.D.
Deposit date:2020-01-15
Release date:2020-03-25
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (3.009 Å)
Cite:Molecular basis of the multifaceted functions of human leucyl-tRNA synthetase in protein synthesis and beyond.
Nucleic Acids Res., 48, 2020
4IX2
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BU of 4ix2 by Molmil
Inosine 5'-monophosphate dehydrogenase from Vibrio cholerae, deletion mutant, complexed with IMP
Descriptor: INOSINIC ACID, Inosine-5'-monophosphate dehydrogenase, POTASSIUM ION
Authors:Osipiuk, J, Maltseva, N, Makowska-Grzyska, M, Gu, M, Anderson, W.F, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2013-01-24
Release date:2013-02-06
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.146 Å)
Cite:Inosine 5'-monophosphate dehydrogenase from Vibrio cholerae, deletion mutant, complexed with IMP.
To be Published
6S8X
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BU of 6s8x by Molmil
Crystal structure of the Rab-binding domain of FIP2
Descriptor: HEXANE-1,6-DIOL, Rab11 family-interacting protein 2
Authors:Kearney, A.M, Khan, A.R.
Deposit date:2019-07-10
Release date:2020-08-05
Last modified:2024-05-15
Method:X-RAY DIFFRACTION (2.29 Å)
Cite:Crystal structure of the Rab-binding domain of Rab11 family-interacting protein 2.
Acta Crystallogr.,Sect.F, 76, 2020
6GU7
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BU of 6gu7 by Molmil
CDK1/Cks2 in complex with AZD5438
Descriptor: 4-(2-methyl-3-propan-2-yl-imidazol-4-yl)-~{N}-(4-methylsulfonylphenyl)pyrimidin-2-amine, Cyclin-dependent kinase 1, Cyclin-dependent kinases regulatory subunit 2
Authors:Wood, D.J, Korolchuk, S, Tatum, N.J, Wang, L.Z, Endicott, J.A, Noble, M.E.M, Martin, M.P.
Deposit date:2018-06-19
Release date:2018-12-05
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.75 Å)
Cite:Differences in the Conformational Energy Landscape of CDK1 and CDK2 Suggest a Mechanism for Achieving Selective CDK Inhibition.
Cell Chem Biol, 26, 2019
1ZSE
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BU of 1zse by Molmil
RNA stemloop from bacteriophage Qbeta complexed with an N87S mutant MS2 Capsid
Descriptor: Coat protein, RNA HAIRPIN
Authors:Horn, W.T, Tars, K, Grahn, E, Helgstrand, C, Baron, A.J, Lago, H, Adams, C.J, Peabody, D.S, Phillips, S.E.V, Stonehouse, N.J, Liljas, L, Stockley, P.G.
Deposit date:2005-05-24
Release date:2006-05-09
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (3 Å)
Cite:Structural Basis of RNA Binding Discrimination between Bacteriophages Qbeta and MS2
Structure, 14, 2006
8QAS
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BU of 8qas by Molmil
Conformations of macrocyclic peptides sampled by exact NOEs: models for cell-permeability. NMR structure of Omphalotin A in methanol / water indoleOut conformation.
Descriptor: TRP-MVA-ILE-MVA-MVA-SAR-MVA-IML-SAR-VAL-IML-SAR
Authors:Ruedisser, S.H, Matabaro, E, Sonderegger, L, Guentert, P, Kuenzler, M, Gossert, A.D.
Deposit date:2023-08-23
Release date:2023-12-06
Last modified:2024-11-13
Method:SOLUTION NMR
Cite:Conformations of Macrocyclic Peptides Sampled by Nuclear Magnetic Resonance: Models for Cell-Permeability.
J.Am.Chem.Soc., 145, 2023
6AYW
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BU of 6ayw by Molmil
The structure of human CamKII with bound inhibitor
Descriptor: 2,3-DIHYDROXY-1,4-DITHIOBUTANE, Calcium/calmodulin-dependent protein kinase type II subunit delta, N-[2-(dimethylamino)ethyl]-3-[6-(thiophen-2-yl)imidazo[1,2-b]pyridazin-3-yl]benzamide
Authors:Somoza, J.R, Villasenor, A.G.
Deposit date:2017-09-08
Release date:2017-11-15
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:The structure of human CamKII with bound inhibitor
To Be Published

227344

數據於2024-11-13公開中

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