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PDB: 88608 results

1ST8
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BU of 1st8 by Molmil
Crystal structure of fructan 1-exohydrolase IIa from Cichorium intybus
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, GLYCEROL, alpha-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Verhaest, M, Van den Ende, W, De Ranter, C.J, Van Laere, A, Rabijns, A.
Deposit date:2004-03-25
Release date:2005-03-01
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:X-ray diffraction structure of a plant glycosyl hydrolase family 32 protein: fructan 1-exohydrolase IIa of Cichorium intybus.
Plant J., 41, 2005
1K2Y
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BU of 1k2y by Molmil
Crystal Structure of Phosphomannomutase/Phosphoglucomutase S108A mutant from P. aeruginosa
Descriptor: L(+)-TARTARIC ACID, ZINC ION, phosphomannomutase
Authors:Regni, C, Tipton, P.A, Beamer, L.J.
Deposit date:2001-09-30
Release date:2002-02-13
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Crystal structure of PMM/PGM: an enzyme in the biosynthetic pathway of P. aeruginosa virulence factors.
Structure, 10, 2002
7SP3
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BU of 7sp3 by Molmil
E. coli RppH bound to Ap4A
Descriptor: BIS(ADENOSINE)-5'-TETRAPHOSPHATE, CHLORIDE ION, FLUORIDE ION, ...
Authors:Serganov, A.A, Vasilyev, N, Nuthanakanti, A.
Deposit date:2021-11-02
Release date:2022-03-09
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:A distinct RNA recognition mechanism governs Np 4 decapping by RppH.
Proc.Natl.Acad.Sci.USA, 119, 2022
1SVE
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BU of 1sve by Molmil
Crystal Structure of Protein Kinase A in Complex with Azepane Derivative 1
Descriptor: (4R)-4-(2-FLUORO-6-HYDROXY-3-METHOXY-BENZOYL)-BENZOIC ACID (3R)-3-[(PYRIDINE-4-CARBONYL)AMINO]-AZEPAN-4-YL ESTER, N-OCTANOYL-N-METHYLGLUCAMINE, SODIUM ION, ...
Authors:Breitenlechner, C.B, Wegge, T, Berillon, L, Graul, K, Marzenell, K, Friebe, W.-G, Thomas, U, Schumacher, R, Huber, R, Engh, R.A, Masjost, B.
Deposit date:2004-03-29
Release date:2005-03-29
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.49 Å)
Cite:Structure-based optimization of novel azepane derivatives as PKB inhibitors
J.Med.Chem., 47, 2004
1SVR
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BU of 1svr by Molmil
STRUCTURE OF SEVERIN DOMAIN 2 IN SOLUTION
Descriptor: SEVERIN
Authors:Schnuchel, A, Holak, T.A.
Deposit date:1994-10-12
Release date:1995-02-07
Last modified:2017-11-29
Method:SOLUTION NMR
Cite:Structure of severin domain 2 in solution.
J.Mol.Biol., 247, 1995
2ION
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BU of 2ion by Molmil
Crystal structure of the C-terminal MA3 domain of Pdcd4 (mouse); form2
Descriptor: GLYCEROL, Programmed Cell Death 4, Pdcd4
Authors:Wlodawer, A, LaRonde-LeBlanc, N.A.
Deposit date:2006-10-10
Release date:2006-11-14
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.57 Å)
Cite:Structural basis for inhibition of translation by the tumor suppressor pdcd4.
Mol.Cell.Biol., 27, 2007
1SVU
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BU of 1svu by Molmil
Structure of the Q237W mutant of HhaI DNA methyltransferase: an insight into protein-protein interactions
Descriptor: Modification methylase HhaI, S-ADENOSYL-L-HOMOCYSTEINE, SULFATE ION, ...
Authors:Dong, A, Zhou, L, Zhang, X, Stickel, S, Roberts, R.J, Cheng, X.
Deposit date:2004-03-30
Release date:2004-06-29
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.66 Å)
Cite:Structure of the Q237W mutant of HhaI DNA methyltransferase: an insight into protein-protein interactions
Biol.Chem., 385, 2004
7SSU
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BU of 7ssu by Molmil
Structure of EmrE-D3 mutant in complex with monobody L10 and methyltriphenylphosphonium
Descriptor: L10 monobody, Multidrug transporter EmrE, methyltriphenylphosphonium
Authors:Kermani, A.A, Stockbridge, R.B.
Deposit date:2021-11-11
Release date:2022-03-02
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (3.22 Å)
Cite:Crystal structures of bacterial small multidrug resistance transporter EmrE in complex with structurally diverse substrates.
Elife, 11, 2022
2IPX
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BU of 2ipx by Molmil
Human Fibrillarin
Descriptor: 5'-DEOXY-5'-METHYLTHIOADENOSINE, CALCIUM ION, rRNA 2'-O-methyltransferase fibrillarin
Authors:Min, J, Wu, H, Zeng, H, Loppnau, P, Weigelt, J, Sundstrom, M, Arrowsmith, C.H, Edwards, A.M, Bochkarev, A, Plotnikov, A.N, Structural Genomics Consortium (SGC)
Deposit date:2006-10-12
Release date:2006-10-24
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.82 Å)
Cite:The Crystal Structure of Human Fibrillarin in complex with SAH
To be Published
3EC8
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BU of 3ec8 by Molmil
The crystal structure of the RA domain of FLJ10324 (RADIL)
Descriptor: CHLORIDE ION, GLYCEROL, LEAD (II) ION, ...
Authors:Wisniewska, M, Lehtio, L, Andersson, J, Arrowsmith, C.H, Collins, R, Dahlgren, L.G, Edwards, A.M, Flodin, S, Flores, A, Graslund, S, Hammarstrom, M, Johansson, A, Johansson, I, Karlberg, T, Kotenyova, T, Moche, M, Nilsson, M.E, Nordlund, P, Nyman, T, Olesen, K, Persson, C, Sagemark, J, Schueler, H, Thorsell, A.G, Tresaugues, L, van den Berg, S, Weigelt, J, Welin, M, Wikstrom, M, Berglund, H, Structural Genomics Consortium (SGC)
Deposit date:2008-08-29
Release date:2008-09-30
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:The crystal structure of the RA domain of FLJ10324 (RADIL)
to be published
7SZT
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BU of 7szt by Molmil
Crystal structure of Gdx-Clo from Small Multidrug Resistance family of transporters in low pH (protonated state)
Descriptor: Dodecyldimethylphosphine oxide, L10 monobody, Multidrug resistance protein, ...
Authors:Kermani, A.A, Stockbridge, R.B, Burata, O.E.
Deposit date:2021-11-29
Release date:2022-03-02
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.32 Å)
Cite:Crystal structures of bacterial small multidrug resistance transporter EmrE in complex with structurally diverse substrates.
Elife, 11, 2022
6W0E
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BU of 6w0e by Molmil
Open-gate KcsA soaked in 10 mM BaCl2
Descriptor: BARIUM ION, Fab Heavy Chain, Fab Light Chain, ...
Authors:Rohaim, A, Gong, L, Li, J.
Deposit date:2020-02-29
Release date:2020-07-08
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (3.512 Å)
Cite:Open and Closed Structures of a Barium-Blocked Potassium Channel.
J.Mol.Biol., 432, 2020
2IRV
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BU of 2irv by Molmil
Crystal structure of GlpG, a rhomboid intramembrane serine protease
Descriptor: (1R)-2-{[{[(2S)-2,3-DIHYDROXYPROPYL]OXY}(HYDROXY)PHOSPHORYL]OXY}-1-[(PALMITOYLOXY)METHYL]ETHYL (11E)-OCTADEC-11-ENOATE, DODECYL-BETA-D-MALTOSIDE, LAURYL DIMETHYLAMINE-N-OXIDE, ...
Authors:Bibi, E, Fass, D, Ben-Shem, A.
Deposit date:2006-10-16
Release date:2006-10-31
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural basis for intramembrane proteolysis by rhomboid serine proteases.
Proc.Natl.Acad.Sci.Usa, 104, 2007
7TDG
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BU of 7tdg by Molmil
Rabbit RyR1 with AMP-PCP and high Ca2+ embedded in nanodisc in inactivated conformation (Dataset-A)
Descriptor: (2S)-3-(hexadecanoyloxy)-2-[(9Z)-octadec-9-enoyloxy]propyl 2-(trimethylammonio)ethyl phosphate, CALCIUM ION, PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER, ...
Authors:Nayak, A.R, Samso, M.
Deposit date:2021-12-31
Release date:2022-03-09
Last modified:2022-03-16
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:Ca 2+ -inactivation of the mammalian ryanodine receptor type 1 in a lipidic environment revealed by cryo-EM.
Elife, 11, 2022
6W0K
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BU of 6w0k by Molmil
HBV D78S mutant capsid
Descriptor: Capsid protein
Authors:Zhao, Z, Wang, J, Zlotnick, A.
Deposit date:2020-03-01
Release date:2020-09-30
Last modified:2020-12-30
Method:ELECTRON MICROSCOPY (4.6 Å)
Cite:The Integrity of the Intradimer Interface of the Hepatitis B Virus Capsid Protein Dimer Regulates Capsid Self-Assembly.
Acs Chem.Biol., 15, 2020
3EDH
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BU of 3edh by Molmil
Crystal structure of bone morphogenetic protein 1 protease domain in complex with partially bound DMSO
Descriptor: ACETYL GROUP, Bone morphogenetic protein 1, DIMETHYL SULFOXIDE, ...
Authors:Mac Sweeney, A.
Deposit date:2008-09-03
Release date:2008-09-16
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.25 Å)
Cite:Structural basis for the substrate specificity of bone morphogenetic protein 1/tolloid-like metalloproteases
To be Published
3ZSI
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BU of 3zsi by Molmil
X-ray structure of p38alpha bound to VX-745
Descriptor: 5-(2,6-dichlorophenyl)-2-[(2,4-difluorophenyl)sulfanyl]-6H-pyrimido[1,6-b]pyridazin-6-one, MITOGEN-ACTIVATED PROTEIN KINASE 14, octyl beta-D-glucopyranoside
Authors:Azevedo, R, van Zeeland, M, Raaijmakers, H, Kazemier, B, Oubrie, A.
Deposit date:2011-06-28
Release date:2012-06-13
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:X-ray structure of p38 alpha bound to TAK-715: comparison with three classic inhibitors.
Acta Crystallogr. D Biol. Crystallogr., 68, 2012
4RA4
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BU of 4ra4 by Molmil
Crystal Structure of Human Protein Kinase C Alpha in Complex with Compound 28 ((R)-6-((3S,4S)-1,3-Dimethyl-piperidin-4-yl)-7-(2-fluoro-phenyl)-4-methyl-2,10-dihydro-9-oxa-1,2,4a-triaza-phenanthren-3-one)
Descriptor: (1R)-9-[(3S,4S)-1,3-dimethylpiperidin-4-yl]-8-(2-fluorophenyl)-1-methyl-3,5-dihydro[1,2,4]triazino[3,4-c][1,4]benzoxazin-2(1H)-one, Protein kinase C
Authors:Argiriadi, M.A, George, D.M.
Deposit date:2014-09-09
Release date:2014-10-08
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2.63 Å)
Cite:Optimized Protein Kinase C theta (PKC theta ) Inhibitors Reveal Only Modest Anti-inflammatory Efficacy in a Rodent Model of Arthritis.
J.Med.Chem., 58, 2015
3EFI
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BU of 3efi by Molmil
Carbonic anhydrase activators: Kinetic and X-ray crystallographic study for the interaction of d- and l-tryptophan with the mammalian isoforms I-XIV
Descriptor: Carbonic anhydrase 2, MERCURIBENZOIC ACID, TRYPTOPHAN, ...
Authors:Temperini, C, Innocenti, A, Scozzafava, A, Supuran, C.T.
Deposit date:2008-09-09
Release date:2008-09-30
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Carbonic anhydrase activators: kinetic and X-ray crystallographic study for the interaction of D- and L-tryptophan with the mammalian isoforms I-XIV
Bioorg.Med.Chem., 16, 2008
4IHA
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BU of 4iha by Molmil
Crystal structure of rice DWARF14 (D14) in complex with a GR24 hydrolysis intermediate
Descriptor: (2R,3R)-2,4,4-trihydroxy-3-methylbutanal, Dwarf 88 esterase
Authors:Zhou, X.E, Zhao, L.-H, Wu, Z.-S, Yi, W, Li, S, Li, Y, Xu, Y, Xu, T.-H, Liu, Y, Chen, R.-Z, Kovach, A, Kang, Y, Hou, L, He, Y, Zhang, C, Melcher, K, Xu, H.E.
Deposit date:2012-12-18
Release date:2013-01-23
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Crystal structures of two phytohormone signal-transducing alpha / beta hydrolases: karrikin-signaling KAI2 and strigolactone-signaling DWARF14.
Cell Res., 23, 2013
1T4B
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BU of 1t4b by Molmil
1.6 Angstrom structure of Esherichia coli aspartate-semialdehyde dehydrogenase.
Descriptor: Aspartate-semialdehyde dehydrogenase, SODIUM ION
Authors:Nichols, C.E, Dhaliwal, B, Lockyer, M, Hawkins, A.R, Stammers, D.K.
Deposit date:2004-04-29
Release date:2004-07-13
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:High-resolution Structures Reveal Details of Domain Closure and "Half-of-sites-reactivity" in Escherichia coli Aspartate beta-Semialdehyde Dehydrogenase.
J.Mol.Biol., 341, 2004
2J5D
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BU of 2j5d by Molmil
NMR structure of BNIP3 transmembrane domain in lipid bicelles
Descriptor: BCL2/ADENOVIRUS E1B 19 KDA PROTEIN-INTERACTING PROTEIN 3
Authors:Bocharov, E.V, Pustovalova, Y.E, Volynsky, P.E, Maslennikov, I.V, Goncharuk, M.V, Ermolyuk, Y.S, Arseniev, A.S.
Deposit date:2006-09-14
Release date:2007-04-17
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Unique dimeric structure of BNip3 transmembrane domain suggests membrane permeabilization as a cell death trigger.
J. Biol. Chem., 282, 2007
4RE3
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BU of 4re3 by Molmil
Different transition state conformations for the hydrolysis of beta-mannosides and beta-glucosides in the rice Os7BGlu26 family GH1 beta-mannosidase/beta-glucosidase
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, Beta-mannosidase/beta-glucosidase, ...
Authors:Tankrathok, A, Iglesias-Fernandez, J, Williams, R.J, Hakki, Z, Robinson, R.C, Hrmova, M, Rovira, C, Williams, S.J, Ketudat Cairns, J.R.
Deposit date:2014-09-21
Release date:2015-09-16
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.55 Å)
Cite:A Single Glycosidase Harnesses Different Pyranoside Ring Transition State Conformations for Hydrolysis of Mannosides and Glucosides
ACS CATALYSIS, 5, 2015
4R7W
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BU of 4r7w by Molmil
Crystal structure of 5-methylcytosine deaminase from Klebsiella pneumoniae liganded with phosphonocytosine
Descriptor: (2R)-2-amino-2,5-dihydro-1,5,2-diazaphosphinin-6(1H)-one 2-oxide, 1,2-ETHANEDIOL, Cytosine deaminase, ...
Authors:Fedorov, A.A, Fedorov, E.V, Hitchcock, D.S, Raushel, F.M, Almo, S.C.
Deposit date:2014-08-28
Release date:2014-09-17
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.902 Å)
Cite:Crystal structure of 5-methylcytosine deaminase from Klebsiella pneumoniae liganded with phosphonocytosine
To be Published
3ZR0
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BU of 3zr0 by Molmil
Crystal structure of human MTH1 in complex with 8-oxo-dGMP
Descriptor: 7,8-DIHYDRO-8-OXOGUANINE TRIPHOSPHATASE, 8-OXO-2'-DEOXY-GUANOSINE-5'-MONOPHOSPHATE, SULFATE ION
Authors:Svensson, L.M, Jemth, A, Desroses, M, Loseva, O, Helleday, T, Hogbom, M, Stenmark, P.
Deposit date:2011-06-13
Release date:2011-07-27
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal Structure of Human Mth1 and the 8-Oxo-Dgmp Product Complex.
FEBS Lett., 585, 2011

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數據於2024-07-24公開中

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