Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 89832 results

7FQH
DownloadVisualize
BU of 7fqh by Molmil
Crystal Structure of human Legumain in complex with (2S)-N-[(3S)-5-amino-5-oxopent-1-yn-3-yl]-1-[1-[4-(cyclopropylmethoxy)phenyl]cyclopropanecarbonyl]pyrrolidine-2-carboxamide
Descriptor: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, Legumain, ...
Authors:Ehler, A, Benz, J, Bartels, B, Hewings-David, S, Rudolph, M.G.
Deposit date:2022-10-05
Release date:2023-10-11
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.18 Å)
Cite:Crystal Structure of a human Legumain complex
To be published
5ZBU
DownloadVisualize
BU of 5zbu by Molmil
Crystal Structure of PA-TM-RING E3 ligase RNF13 RING domain in complex with E2~Ub
Descriptor: E3 ubiquitin-protein ligase RNF13, Ubiquitin, Ubiquitin-conjugating enzyme E2 D2, ...
Authors:Datta, A.B, Sarkar, S.
Deposit date:2018-02-12
Release date:2019-02-27
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Crystal Structure of PA-TM-RING E3 ligase RNF13 RING domain in complex with E2~Ub
To Be Published
5JQF
DownloadVisualize
BU of 5jqf by Molmil
Crystal structure of the lasso peptide Sphingopyxin I (SpI)
Descriptor: Sphingopyxin I
Authors:Fage, C.D, Hegemann, J.D, Harms, K, Bange, G, Marahiel, M.A.
Deposit date:2016-05-04
Release date:2016-09-14
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (0.85 Å)
Cite:Structure and Mechanism of the Sphingopyxin I Lasso Peptide Isopeptidase.
Angew. Chem. Int. Ed. Engl., 55, 2016
4NR4
DownloadVisualize
BU of 4nr4 by Molmil
Crystal structure of the bromodomain of human CREBBP in complex with an isoxazolyl-benzimidazole ligand
Descriptor: 1,2-ETHANEDIOL, 1-(4-chlorobenzyl)-5-(3,5-dimethyl-1,2-oxazol-4-yl)-1H-benzimidazole, CREB-binding protein, ...
Authors:Filippakopoulos, P, Picaud, S, Felletar, I, Hay, D, Fedorov, O, Martin, S, von Delft, F, Brennan, P, Arrowsmith, C.H, Edwards, A.M, Bountra, C, Knapp, S, Structural Genomics Consortium (SGC)
Deposit date:2013-11-26
Release date:2013-12-18
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.69 Å)
Cite:Crystal structure of the bromodomain of human CREBBP in complex with an isoxazolyl-benzimidazole ligand
TO BE PUBLISHED
6M44
DownloadVisualize
BU of 6m44 by Molmil
355 bp di-nucleosome harboring cohesive DNA termini (high cryoprotectant)
Descriptor: CALCIUM ION, DNA (355-MER), Histone H2A type 1-B/E, ...
Authors:Adhireksan, Z, Sharma, D, Lee, P.L, Davey, C.A.
Deposit date:2020-03-05
Release date:2020-10-07
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (3.81 Å)
Cite:Near-atomic resolution structures of interdigitated nucleosome fibres.
Nat Commun, 11, 2020
2Q74
DownloadVisualize
BU of 2q74 by Molmil
Mycobacterium tuberculosis SuhB
Descriptor: Inositol-1-monophosphatase
Authors:Brown, A.K, Meng, G, Ghadbane, H, Besra, G.S, Futterer, K.
Deposit date:2007-06-06
Release date:2007-10-23
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Dimerization of inositol monophosphatase Mycobacterium tuberculosis SuhB is not constitutive, but induced by binding of the activator Mg2+
Bmc Struct.Biol., 7, 2007
5JRX
DownloadVisualize
BU of 5jrx by Molmil
Crystal structure of Fe(II) CO-bound H-NOX protein from C. subterraneus
Descriptor: CARBON MONOXIDE, Methyl-accepting chemotaxis protein, PROTOPORPHYRIN IX CONTAINING FE
Authors:Bruegger, J, Hespen, C, Phillips-Piro, C.M, Marletta, M.A.
Deposit date:2016-05-06
Release date:2016-07-06
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Structural and Functional Evidence Indicates Selective Oxygen Signaling in Caldanaerobacter subterraneus H-NOX.
Acs Chem.Biol., 11, 2016
6VPS
DownloadVisualize
BU of 6vps by Molmil
Cryo-EM structure of the amyloid core of Drosophila Orb2 isolated from head
Descriptor: Translational regulator orb2
Authors:Hervas, R, Rau, M.J, Park, Y, Zhang, W, Murzin, A.G, Fitzpatrick, J.A.J, Scheres, S.H.W, Si, K.
Deposit date:2020-02-04
Release date:2020-03-18
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (2.6 Å)
Cite:Cryo-EM structure of a neuronal functional amyloid implicated in memory persistence in Drosophila
Science, 367, 2020
4DXE
DownloadVisualize
BU of 4dxe by Molmil
2.52 Angstrom resolution crystal structure of the acyl-carrier-protein synthase (AcpS)-acyl carrier protein (ACP) protein-protein complex from Staphylococcus aureus subsp. aureus COL
Descriptor: Acyl carrier protein, MALONATE ION, acyl-carrier-protein synthase
Authors:Halavaty, A.S, Minasov, G, Filippova, E.V, Dubrovska, I, Winsor, J, Shuvalova, L, Peterson, S.N, Anderson, W.F, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2012-02-27
Release date:2012-03-14
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.51 Å)
Cite:2.52 Angstrom resolution crystal structure of the acyl-carrier-protein synthase (AcpS)-acyl carrier protein (ACP) protein-protein complex from Staphylococcus aureus subsp. aureus COL
To be Published
3G7Y
DownloadVisualize
BU of 3g7y by Molmil
Crystal structure of oxidized Ost6L
Descriptor: Dolichyl-diphosphooligosaccharide-protein glycosyltransferase subunit OST6
Authors:Stirnimann, C.U, Grimshaw, J.P.A, Schulz, B.L, Brozzo, M.S, Fritsch, F, Glockshuber, R, Capitani, G, Gruetter, M.G, Aebi, M.
Deposit date:2009-02-11
Release date:2009-06-16
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (2.215 Å)
Cite:Oxidoreductase activity of oligosaccharyltransferase subunits Ost3p and Ost6p defines site-specific glycosylation efficiency.
Proc.Natl.Acad.Sci.USA, 106, 2009
3N7Z
DownloadVisualize
BU of 3n7z by Molmil
Crystal structure of acetyltransferase from Bacillus anthracis
Descriptor: Acetyltransferase, GNAT family, SODIUM ION
Authors:Chang, C, Wu, R, Gornicki, P, Zhang, R, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2010-05-27
Release date:2010-06-16
Last modified:2017-11-08
Method:X-RAY DIFFRACTION (2.75 Å)
Cite:Biochemical and Structural Analysis of an Eis Family Aminoglycoside Acetyltransferase from Bacillus anthracis.
Biochemistry, 54, 2015
1ZGJ
DownloadVisualize
BU of 1zgj by Molmil
Crystal structure of isoflavanone 4'-O-methyltransferase complexed with (+)-pisatin
Descriptor: (6AR,12AR)-3-(HYDROXYMETHYL)-6H-[1,3]DIOXOLO[5,6][1]BENZOFURO[3,2-C]CHROMEN-6A(12AH)-OL, Isoflavanone 4'-O-methyltransferase', S-ADENOSYL-L-HOMOCYSTEINE
Authors:Liu, C.-J, Deavours, B.E, Richard, S, Ferrer, J.-L, Dixon, R.A, Noel, J.P.
Deposit date:2005-04-21
Release date:2006-08-01
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structural basis for dual functionality of isoflavonoid O-methyltransferases in the evolution of plant defense responses.
Plant Cell, 18, 2006
1B9L
DownloadVisualize
BU of 1b9l by Molmil
7,8-DIHYDRONEOPTERIN TRIPHOSPHATE EPIMERASE
Descriptor: PROTEIN (EPIMERASE)
Authors:Ploom, T, Haussmann, C, Hof, P, Steinbacher, S, Bacher, A, Richardson, J, Huber, R.
Deposit date:1999-02-11
Release date:2000-02-18
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Crystal structure of 7,8-dihydroneopterin triphosphate epimerase.
Structure Fold.Des., 7, 1999
5ZQ5
DownloadVisualize
BU of 5zq5 by Molmil
SidE-Ubi
Descriptor: SidE, Ubiquitin
Authors:Wang, Y, Gao, A, Gao, P.
Deposit date:2018-04-17
Release date:2018-05-23
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (2.487 Å)
Cite:Structural Insights into Non-canonical Ubiquitination Catalyzed by SidE.
Cell, 173, 2018
5KBU
DownloadVisualize
BU of 5kbu by Molmil
Cryo-EM structure of GluA2-2xSTZ complex at 7.8 Angstrom resolution
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Glutamate receptor 2,Voltage-dependent calcium channel gamma-2 subunit, {[7-morpholin-4-yl-2,3-dioxo-6-(trifluoromethyl)-3,4-dihydroquinoxalin-1(2H)-yl]methyl}phosphonic acid
Authors:Twomey, E.C, Yelshanskaya, M.V, Grassucci, R.A, Frank, J, Sobolevsky, A.I.
Deposit date:2016-06-03
Release date:2016-07-13
Last modified:2020-07-29
Method:ELECTRON MICROSCOPY (7.8 Å)
Cite:Elucidation of AMPA receptor-stargazin complexes by cryo-electron microscopy.
Science, 353, 2016
2G1D
DownloadVisualize
BU of 2g1d by Molmil
Solution Structure of Ribosomal Protein S24E from Thermoplasma acidophilum
Descriptor: 30S ribosomal protein S24e
Authors:Jeon, B.-Y, Hong, E.-M, Jung, J.-W, Yee, A, Arrowsmith, C.H, Lee, W.
Deposit date:2006-02-14
Release date:2007-02-14
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution structure of TA1092, a ribosomal protein S24e from Thermoplasma acidophilum
Proteins, 64, 2006
6JI1
DownloadVisualize
BU of 6ji1 by Molmil
Tetrameric PepTSo2 incorporated in salipro nano particle
Descriptor: Proton:oligopeptide symporter POT family
Authors:Kawamoto, A, Matoba, K, Takagi, J.
Deposit date:2019-02-19
Release date:2019-05-15
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (4.1 Å)
Cite:Structural basis for oligomerization of the prokaryotic peptide transporter PepTSo2.
Acta Crystallogr.,Sect.F, 75, 2019
7KPI
DownloadVisualize
BU of 7kpi by Molmil
Crystal structure of the SPOP MATH domain
Descriptor: Speckle-type POZ protein
Authors:Usher, E.T, Boal, A.K.
Deposit date:2020-11-11
Release date:2021-04-28
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Intrinsically disordered substrates dictate SPOP subnuclear localization and ubiquitination activity.
J.Biol.Chem., 296, 2021
6TNB
DownloadVisualize
BU of 6tnb by Molmil
X-RAY STRUCTURE OF MPS1 IN COMPLEX WITH COMPOUND 41
Descriptor: (2~{R})-2-(4-fluorophenyl)-~{N}-[4-[2-[(2-methoxy-4-methylsulfonyl-phenyl)amino]-[1,2,4]triazolo[1,5-a]pyridin-6-yl]phenyl]propanamide, CHLORIDE ION, Dual specificity protein kinase TTK
Authors:Holton, S.J, Schulze, V.K, Klar, U, Kosemund, D, Siemeister, G, Bader, B, Prechtl, S, Briem, H, Marquardt, T, Schirok, H, Bohlmann, R, Nguyen, D, Fernandez-Montalvan, A, Boemer, U, Eberspaecher, U, Brands, M, Nussbaum, F, Koppitz, M.
Deposit date:2019-12-06
Release date:2020-05-13
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:Treating Cancer by Spindle Assembly Checkpoint Abrogation: Discovery of Two Clinical Candidates, BAY 1161909 and BAY 1217389, Targeting MPS1 Kinase.
J.Med.Chem., 63, 2020
5K16
DownloadVisualize
BU of 5k16 by Molmil
Crystal structure of free Ubiquitin-specific protease 12
Descriptor: GLYCEROL, Ubiquitin carboxyl-terminal hydrolase 12, ZINC ION
Authors:Li, H, D'Andrea, A.D, Zheng, N.
Deposit date:2016-05-17
Release date:2016-07-20
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.599 Å)
Cite:Allosteric Activation of Ubiquitin-Specific Proteases by beta-Propeller Proteins UAF1 and WDR20.
Mol.Cell, 63, 2016
4JVU
DownloadVisualize
BU of 4jvu by Molmil
IgM C2-domain from mouse
Descriptor: Ig mu chain C region membrane-bound form
Authors:Mueller, R, Graewert, A.M, Kern, T, Madl, T, Peschek, J, Sattler, M, Groll, M, Buchner, J.
Deposit date:2013-03-26
Release date:2013-06-12
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:High-resolution structures of the IgM Fc domains reveal principles of its hexamer formation.
Proc.Natl.Acad.Sci.USA, 110, 2013
6T4Y
DownloadVisualize
BU of 6t4y by Molmil
ROR(gamma)t ligand binding domain in complex with 25-hydroxycholesterol and allosteric ligand MRL871
Descriptor: 25-HYDROXYCHOLESTEROL, 4-{1-[2-chloro-6-(trifluoromethyl)benzoyl]-1H-indazol-3-yl}benzoic acid, GLYCEROL, ...
Authors:de Vries, R.M.J.M, Meijer, F.A, Brunsveld, L.
Deposit date:2019-10-15
Release date:2020-11-18
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Cooperativity between the orthosteric and allosteric ligand binding sites of ROR gamma t.
Proc.Natl.Acad.Sci.USA, 118, 2021
7W8B
DownloadVisualize
BU of 7w8b by Molmil
Crystal Structure of human Focal Adhesion Targeting (FAT) domain of the Focal Adhesion Kinase
Descriptor: Isoform 5 of Focal adhesion kinase 1
Authors:Momin, A.A, Sandholu, A.S, Arold, S.T.
Deposit date:2021-12-07
Release date:2023-07-05
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.093 Å)
Cite:Crystal Structure of human Focal Adhesion Targeting (FAT) domain of the Focal Adhesion Kinase
To Be Published
1BAS
DownloadVisualize
BU of 1bas by Molmil
THREE-DIMENSIONAL STRUCTURES OF ACIDIC AND BASIC FIBROBLAST GROWTH FACTORS
Descriptor: BASIC FIBROBLAST GROWTH FACTOR
Authors:Chirino, A.J, Rees, D.C.
Deposit date:1992-09-29
Release date:1993-10-31
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Three-dimensional structures of acidic and basic fibroblast growth factors.
Science, 251, 1991
6F2S
DownloadVisualize
BU of 6f2s by Molmil
CryoEM structure of Ageratum Yellow Vein virus (AYVV)
Descriptor: Capsid protein, coat protein subunit H, coat protein subunit I, ...
Authors:Hesketh, E.L, Saunders, K, Fisher, C, Potze, J, Stanley, J, Lomonossoff, G.P, Ranson, N.A.
Deposit date:2017-11-27
Release date:2018-06-27
Last modified:2024-05-15
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:The 3.3 angstrom structure of a plant geminivirus using cryo-EM.
Nat Commun, 9, 2018

227344

건을2024-11-13부터공개중

PDB statisticsPDBj update infoContact PDBjnumon