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PDB: 89472 results

3IHE
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BU of 3ihe by Molmil
Crystal structure of mouse Bcl-xl mutant (F105A) at pH 6.0
Descriptor: Bcl-2-like protein 1
Authors:Priyadarshi, A, Hwang, K.Y.
Deposit date:2009-07-30
Release date:2010-04-14
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (3 Å)
Cite:Structural insights into mouse anti-apoptotic Bcl-xl reveal affinity for Beclin 1 and gossypol.
Biochem.Biophys.Res.Commun., 394, 2010
5UI1
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BU of 5ui1 by Molmil
Crystal Structure of Human Protein Phosphatase 5C (PP5C) in complex with a triazole inhibitor
Descriptor: 5-phenyl-1H-1,2,3-triazole-4-carboxylic acid, MANGANESE (II) ION, Serine/threonine-protein phosphatase 5
Authors:Chattopadhyay, D, Swingle, M.R, Salter, E.A, Banerjee, S, Honkanen, R.E.
Deposit date:2017-01-12
Release date:2018-01-17
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.96 Å)
Cite:Crystal Structure Human PP5C in Complex with an Inhibitor
To Be Published
7KW6
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BU of 7kw6 by Molmil
Crystal structure of the BlCel48B from Bacillus licheniformis
Descriptor: 1,2-ETHANEDIOL, CALCIUM ION, Exoglucanase-2, ...
Authors:Araujo, E.A, Polikarpov, I.
Deposit date:2020-11-30
Release date:2022-01-19
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.68 Å)
Cite:Impact of cellulose properties on enzymatic degradation by bacterial GH48 enzymes: Structural and mechanistic insights from processive Bacillus licheniformis Cel48B cellulase.
Carbohydr Polym, 264, 2021
6D9Q
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BU of 6d9q by Molmil
The sulfate-bound crystal structure of HPRT (hypoxanthine phosphoribosyltransferase)
Descriptor: GLYCEROL, Hypoxanthine phosphoribosyltransferase, SULFATE ION
Authors:Satyshur, K.A, Dubiel, K, Anderson, B, Wolak, C, Keck, J.L.
Deposit date:2018-04-30
Release date:2019-05-01
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.056 Å)
Cite:Evolution of (p)ppGpp-HPRT regulation through diversification of an allosteric oligomeric interaction.
Elife, 8, 2019
3PRA
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BU of 3pra by Molmil
Structural analysis of protein folding by the Methanococcus jannaschii chaperone FKBP26
Descriptor: FKBP-type peptidyl-prolyl cis-trans isomerase
Authors:Martinez-Hackert, E, Hendrickson, W.A.
Deposit date:2010-11-29
Release date:2011-01-19
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structural Analysis of Protein Folding by the Long-Chain Archaeal Chaperone FKBP26.
J.Mol.Biol., 407, 2011
6VP4
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BU of 6vp4 by Molmil
Ethylene forming enzyme (EFE) in complex with Fe(II), L-arginine, and 2OG
Descriptor: 2-OXOGLUTARIC ACID, 2-[3-(2-HYDROXY-1,1-DIHYDROXYMETHYL-ETHYLAMINO)-PROPYLAMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 2-oxoglutarate-dependent ethylene/succinate-forming enzyme, ...
Authors:Davis, K.M, Copeland, R.A, Boal, A.K.
Deposit date:2020-02-01
Release date:2021-02-03
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.83 Å)
Cite:An Iron(IV)-Oxo Intermediate Initiating l-Arginine Oxidation but Not Ethylene Production by the 2-Oxoglutarate-Dependent Oxygenase, Ethylene-Forming Enzyme.
J.Am.Chem.Soc., 143, 2021
4YSX
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BU of 4ysx by Molmil
Crystal structure of Mitochondrial rhodoquinol-fumarate reductase from Ascaris suum with the specific inhibitor NN23
Descriptor: Cytochrome b-large subunit, FE2/S2 (INORGANIC) CLUSTER, FE3-S4 CLUSTER, ...
Authors:Harada, S, Shiba, T, Sato, D, Yamamoto, A, Nagahama, M, Yone, A, Inaoka, D.K, Sakamoto, K, Inoue, M, Honma, T, Kita, K.
Deposit date:2015-03-17
Release date:2015-08-05
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Structural Insights into the Molecular Design of Flutolanil Derivatives Targeted for Fumarate Respiration of Parasite Mitochondria
Int J Mol Sci, 16, 2015
4YVY
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BU of 4yvy by Molmil
Crystal structure of human carbonic anhydrase II in complex with hydroxylamine-O-sulfonamide, a molecule incorporating two zinc-binding groups.
Descriptor: Carbonic anhydrase 2, ZINC ION, amino(aminooxy)sulfane dioxide
Authors:Di Fiore, A, De Simone, G.
Deposit date:2015-03-20
Release date:2016-03-30
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:A VERSATILE ZINC-BINDING GROUP FOR CARBONIC ANHYDRASE INHIBITORS
To Be Published
3IVP
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BU of 3ivp by Molmil
The structure of a possible transposon-related DNA-binding protein from Clostridium difficile 630.
Descriptor: Putative transposon-related DNA-binding protein, TETRAETHYLENE GLYCOL
Authors:Tan, K, Marshall, N, Jedrzejczak, R, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2009-09-01
Release date:2009-09-22
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.02 Å)
Cite:The structure of a possible transposon-related DNA-binding protein from Clostridium difficile 630.
To be Published
7L7B
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BU of 7l7b by Molmil
Clostridioides difficile RNAP with fidaxomicin
Descriptor: DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, DNA-directed RNA polymerase subunit beta', ...
Authors:Boyaci, H, Campbell, E.A, Darst, S.A, Chen, J.
Deposit date:2020-12-28
Release date:2022-02-02
Last modified:2024-05-29
Method:ELECTRON MICROSCOPY (3.26 Å)
Cite:Basis of narrow-spectrum activity of fidaxomicin on Clostridioides difficile.
Nature, 604, 2022
2VED
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BU of 2ved by Molmil
crystal structure of the chimerical mutant CapABK55M protein
Descriptor: ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, MEMBRANE PROTEIN CAPA1, ...
Authors:Olivares-Illana, V, Meyer, P, Gueguen-Chaignon, V, Soulat, D, Deustcher, J, Cozzone, A.J, Morera, S, Grangeasse, C, Nessler, S.
Deposit date:2007-10-19
Release date:2008-07-01
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structural Basis for the Regulation Mechanism of the Tyrosine Kinase Capb from Staphylococcus Aureus.
Plos Biol., 6, 2008
4MQ0
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BU of 4mq0 by Molmil
Crystal structure of Parkia biglobosa seed lectin (PBL) in complex with methyl alpha D-mannopyranoside
Descriptor: Parkia biglobosa lectin (PBL), methyl alpha-D-mannopyranoside
Authors:Teixeira, C.S, Rocha, B.A.M, Silva, H.C, Bari, A.U, Barroso-Neto, I.L, Santiago, M.Q, Nagano, C.S, Nascimento, K.S, Debray, H, Delatorre, P, Cavada, B.S.
Deposit date:2013-09-14
Release date:2014-12-17
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.12 Å)
Cite:Crystal structure of Parkia biglobosa seed lectin (PBL) in complex with methyl alpha D-mannopyranoside
To be Published
4YW8
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BU of 4yw8 by Molmil
Structure of rat cytosolic pepck in complex with 3-mercaptopicolinic acid
Descriptor: 1,2-ETHANEDIOL, 3-sulfanylpyridine-2-carboxylic acid, MANGANESE (II) ION, ...
Authors:Balan, M.D, Johnson, T.A, Mcleod, M.J, Lotosky, W.R, Holyoak, T.
Deposit date:2015-03-20
Release date:2015-09-23
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Inhibition and Allosteric Regulation of Monomeric Phosphoenolpyruvate Carboxykinase by 3-Mercaptopicolinic Acid.
Biochemistry, 54, 2015
5HM8
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BU of 5hm8 by Molmil
2.85 Angstrom Crystal Structure of S-adenosylhomocysteinase from Cryptosporidium parvum in Complex with Adenosine and NAD.
Descriptor: ADENOSINE, Adenosylhomocysteinase, CHLORIDE ION, ...
Authors:Minasov, G, Shuvalova, L, Halavaty, A, Kiryukhina, O, Dubrovska, I, Bishop, B, Kwon, K, Anderson, W.F, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2016-01-15
Release date:2016-01-27
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.85 Å)
Cite:2.85 Angstrom Crystal Structure of S-adenosylhomocysteinase from Cryptosporidium parvum in Complex with Adenosine and NAD.
To Be Published
3QN8
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BU of 3qn8 by Molmil
HIV-1 protease (mutant Q7K L33I L63I) in complex with a novel inhibitor
Descriptor: (4aS,7aS)-1,4-bis(3-hydroxybenzyl)hexahydro-1H-pyrrolo[3,4-b]pyrazine-2,3-dione, CHLORIDE ION, Protease
Authors:Lindemann, I, Heine, A, Klebe, G.
Deposit date:2011-02-08
Release date:2012-02-08
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.382 Å)
Cite:Novel inhibitors for HIV-1 protease
To be Published
5A52
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BU of 5a52 by Molmil
The crystal structure of Arabidopsis thaliana CAR1 in complex with one calcium ion
Descriptor: CALCIUM ION, CALCIUM-DEPENDENT LIPID-BINDING DOMAIN-CONTAINING PROTEIN, GLYCEROL, ...
Authors:Fernandez, D, Marquez, J.A.
Deposit date:2015-06-16
Release date:2016-03-02
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Calcium-Dependent Oligomerization of Car Proteins at Cell Membrane Modulates Aba Signaling.
Proc.Natl.Acad.Sci.USA, 113, 2016
1AFJ
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BU of 1afj by Molmil
STRUCTURE OF THE MERCURY-BOUND FORM OF MERP, THE PERIPLASMIC PROTEIN FROM THE BACTERIAL MERCURY DETOXIFICATION SYSTEM, NMR, 20 STRUCTURES
Descriptor: MERCURY (II) ION, MERP
Authors:Steele, R.A, Opella, S.J.
Deposit date:1997-03-07
Release date:1997-07-23
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Structures of the reduced and mercury-bound forms of MerP, the periplasmic protein from the bacterial mercury detoxification system.
Biochemistry, 36, 1997
6W3S
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BU of 6w3s by Molmil
Crystal structure of ligand-binding domain of Campylobacter jejuni chemoreceptor Tlp3 in complex with L-leucine
Descriptor: GLYCEROL, LEUCINE, Methyl-accepting chemotaxis protein, ...
Authors:Khan, M.F, Machuca, M.A, Rahman, M.M, Roujeinikova, A.
Deposit date:2020-03-09
Release date:2020-05-20
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Structure-Activity Relationship Study Reveals the Molecular Basis for Specific Sensing of Hydrophobic Amino Acids by theCampylobacter jejuniChemoreceptor Tlp3.
Biomolecules, 10, 2020
4ZVT
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BU of 4zvt by Molmil
Caspase-7 Variant 1 (V1) with reprogrammed substrate specificity due to Y230A/W232M/S234N substitutions, bound to VEID inhibitor.
Descriptor: Caspase-7, VEID inhibitor
Authors:Hardy, J.A, MacPherson, D.J, Hill, M.E.
Deposit date:2015-05-18
Release date:2016-04-20
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.85 Å)
Cite:Reprogramming Caspase-7 Specificity by Regio-Specific Mutations and Selection Provides Alternate Solutions for Substrate Recognition.
Acs Chem.Biol., 11, 2016
6DDL
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BU of 6ddl by Molmil
Crystal structure of the single mutant (D52N) of NT5C2-Q523X in the basal state
Descriptor: Cytosolic purine 5'-nucleotidase, PHOSPHATE ION
Authors:Forouhar, F, Dieck, C.L, Tzoneva, G, Carpenter, Z, Ambesi-Impiombato, A, Sanchez-Martin, M, Kirschner-Schwabe, R, Lew, S, Seetharaman, J, Ferrando, A.A, Tong, L.
Deposit date:2018-05-10
Release date:2018-07-04
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.26 Å)
Cite:Structure and Mechanisms of NT5C2 Mutations Driving Thiopurine Resistance in Relapsed Lymphoblastic Leukemia.
Cancer Cell, 34, 2018
5TVI
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BU of 5tvi by Molmil
Crystal structure of non-specific lipid transfer protein reveals non-canonical lipid binding: possible relevance in modulating allergenicity
Descriptor: GLYCEROL, MYRISTIC ACID, non specific lipid transfer protein, ...
Authors:Jain, A, Salunke, D.M.
Deposit date:2016-11-09
Release date:2017-07-05
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.87 Å)
Cite:Crystal structure of nonspecific lipid transfer protein from Solanum melongena
Proteins, 85, 2017
6IYH
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BU of 6iyh by Molmil
X-ray sequence and high resolution crystal structure of Persian sturgeon methemoglobin
Descriptor: Alpha chain, Beta chain, PROTOPORPHYRIN IX CONTAINING FE, ...
Authors:Seyedarabi, A.
Deposit date:2018-12-16
Release date:2019-04-10
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Novel X-ray sequences and crystal structures of Persian and Starry sturgeon methemoglobins: Highlighting the role of heme pocket waters in causing autoxidation
Biochim Biophys Acta Proteins Proteom, 1867, 2019
6VYN
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BU of 6vyn by Molmil
N-terminal domain of mouse surfactant protein B with bound lipid, wild type
Descriptor: (7Z,19R,22R)-25-amino-22-hydroxy-16,22-dioxo-17,21,23-trioxa-22lambda~5~-phosphapentacos-7-en-19-yl (9Z)-octadec-9-enoate, Pulmonary surfactant-associated protein B
Authors:Rapoport, T.A, Bodnar, N.O.
Deposit date:2020-02-27
Release date:2020-11-25
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Mechanism of Lamellar Body Formation by Lung Surfactant Protein B.
Mol.Cell, 81, 2021
3IY4
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BU of 3iy4 by Molmil
Variable domains of the computer generated model (WAM) of Fab 15 fitted into the cryoEM reconstruction of the virus-Fab 15 complex
Descriptor: fragment of neutralizing antibody 15 (heavy chain), fragment of neutralizing antibody 15 (light chain)
Authors:Hafenstein, S, Bowman, V.D, Sun, T, Nelson, C.D, Palermo, L.M, Chipman, P.R, Battisti, A.J, Parrish, C.R, Rossmann, M.G.
Deposit date:2009-04-09
Release date:2009-05-12
Last modified:2018-07-18
Method:ELECTRON MICROSCOPY (11.7 Å)
Cite:Structural comparison of different antibodies interacting with parvovirus capsids
J.Virol., 83, 2009
6NJS
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BU of 6njs by Molmil
Stat3 Core in complex with compound SD36
Descriptor: Signal transducer and activator of transcription 3, [(2-{[(5S,8S,10aR)-3-acetyl-8-({(2S)-5-amino-1-[(diphenylmethyl)amino]-1,5-dioxopentan-2-yl}carbamoyl)-6-oxodecahydropyrrolo[1,2-a][1,5]diazocin-5-yl]carbamoyl}-1H-indol-5-yl)(difluoro)methyl]phosphonic acid (non-preferred name)
Authors:Meagher, J.L, Stuckey, J.A.
Deposit date:2019-01-04
Release date:2019-12-04
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:A Potent and Selective Small-Molecule Degrader of STAT3 Achieves Complete Tumor Regression In Vivo.
Cancer Cell, 36, 2019

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