Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 88675 件

8SML
DownloadVisualize
BU of 8sml by Molmil
hPAD4 bound to inhibitory Fab hI365
分子名称: CALCIUM ION, Fab hI365 heavy chain, Fab hI365 light chain, ...
著者Maker, A, Verba, K.A.
登録日2023-04-26
公開日2024-03-06
最終更新日2024-06-12
実験手法ELECTRON MICROSCOPY (3.3 Å)
主引用文献Antibody discovery identifies regulatory mechanisms of protein arginine deiminase 4.
Nat.Chem.Biol., 20, 2024
6XAL
DownloadVisualize
BU of 6xal by Molmil
Crystal structure of NzeB in complex with cyclo-(L-Trp-L-Val)
分子名称: (3S,6S)-3-[(1H-indol-3-yl)methyl]-6-(propan-2-yl)piperazine-2,5-dione, NzeB, PROTOPORPHYRIN IX CONTAINING FE
著者Shende, V.V, Khatri, Y, Newmister, S.A, Sanders, J.N, Lindovska, P, Yu, F, Doyon, T.J, Kim, J, Movassaghi, M, Houk, K.N, Sherman, D.H.
登録日2020-06-04
公開日2021-06-09
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.349 Å)
主引用文献Structure and Function of NzeB, a Versatile C-C and C-N Bond-Forming Diketopiperazine Dimerase.
J.Am.Chem.Soc., 142, 2020
7Q0Z
DownloadVisualize
BU of 7q0z by Molmil
Crystal structure of CTX-M-14
分子名称: Beta-lactamase, GLYCEROL, SULFATE ION
著者Werner, N, Perbandt, M, Hinrichs, W, Prester, A, Rohde, H, Aepfelbacher, M, Betzel, C.
登録日2021-10-17
公開日2022-04-13
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1 Å)
主引用文献Structural basis to repurpose boron-based proteasome inhibitors Bortezomib and Ixazomib as beta-lactamase inhibitors.
Sci Rep, 12, 2022
6UUM
DownloadVisualize
BU of 6uum by Molmil
Crystal structure of antibody 438-B11 DSS mutant (Cys98A-Cys100aA)
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, ACETATE ION, B11 DSS Fab Heavy Chain, ...
著者Kumar, S, Wilson, I.A.
登録日2019-10-30
公開日2020-09-23
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献A V H 1-69 antibody lineage from an infected Chinese donor potently neutralizes HIV-1 by targeting the V3 glycan supersite.
Sci Adv, 6, 2020
6F9M
DownloadVisualize
BU of 6f9m by Molmil
The LIPY/F-motif in an intracellular subtilisin protease is involved in inhibition
分子名称: ACETATE ION, SODIUM ION, Serine protease, ...
著者Bjerga, G.E.K, Larsen, O, Arsin, H, Williamson, A.K, Garcia-Moyano, A, Leiros, I, Puntervoll, P.
登録日2017-12-14
公開日2018-06-27
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.298 Å)
主引用文献Mutational analysis of the pro-peptide of a marine intracellular subtilisin protease supports its role in inhibition.
Proteins, 86, 2018
6XAM
DownloadVisualize
BU of 6xam by Molmil
Crystal structure of NzeB in complex with cyclo-(L-Trp-L-homoalanine)
分子名称: (3S,6S)-3-ethyl-6-[(1H-indol-3-yl)methyl]piperazine-2,5-dione, 1,2-ETHANEDIOL, NzeB, ...
著者Shende, V.V, Khatri, Y, Newmister, S.A, Sanders, J.N, Lindovska, P, Yu, F, Doyon, T.J, Kim, J, Movassaghi, M, Houk, K.N, Sherman, D.H.
登録日2020-06-04
公開日2021-06-09
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.481 Å)
主引用文献Structure and Function of NzeB, a Versatile C-C and C-N Bond-Forming Diketopiperazine Dimerase.
J.Am.Chem.Soc., 142, 2020
4XZ3
DownloadVisualize
BU of 4xz3 by Molmil
Ca. Korarchaeum cryptofilum dinucleotide forming Acetyl-coenzyme A synthetase 1 (Se-Met derivative) in complex with coenzyme A and Mg-AMPPCP, phosphohistidine segment pointing towards nucleotide binding site
分子名称: Acyl-CoA synthetase (NDP forming), COENZYME A, MAGNESIUM ION, ...
著者Weisse, R.H.-J, Scheidig, A.J.
登録日2015-02-03
公開日2016-01-27
最終更新日2016-02-10
実験手法X-RAY DIFFRACTION (2.398 Å)
主引用文献Structure of NDP-forming Acetyl-CoA synthetase ACD1 reveals a large rearrangement for phosphoryl transfer.
Proc.Natl.Acad.Sci.USA, 113, 2016
6XAJ
DownloadVisualize
BU of 6xaj by Molmil
Crystal structure of NzeB
分子名称: 1,2-ETHANEDIOL, NzeB, PROTOPORPHYRIN IX CONTAINING FE
著者Shende, V.V, Khatri, Y, Newmister, S.A, Sanders, J.N, Lindovska, P, Yu, F, Doyon, T.J, Kim, J, Movassaghi, M, Houk, K.N, Sherman, D.H.
登録日2020-06-04
公開日2021-06-09
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.498 Å)
主引用文献Structure and Function of NzeB, a Versatile C-C and C-N Bond-Forming Diketopiperazine Dimerase.
J.Am.Chem.Soc., 142, 2020
6UUX
DownloadVisualize
BU of 6uux by Molmil
Schistosoma mansoni (Blood Fluke) Sulfotransferase/Hycanthone Complex
分子名称: ADENOSINE-3'-5'-DIPHOSPHATE, Sulfotransferase, hycanthone
著者Taylor, A.B.
登録日2019-11-01
公開日2020-02-19
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Molecular basis for hycanthone drug action in schistosome parasites.
Mol.Biochem.Parasitol., 236, 2020
5JCY
DownloadVisualize
BU of 5jcy by Molmil
Spir2-GTBM bound to MyoVa-GTD
分子名称: Protein spire homolog 2, Unconventional myosin-Va
著者Pylypenko, O, Malherbes, G, Welz, T, Kerkhoff, E, Houdusse, A.
登録日2016-04-15
公開日2016-09-28
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Coordinated recruitment of Spir actin nucleators and myosin V motors to Rab11 vesicle membranes.
Elife, 5, 2016
7Q62
DownloadVisualize
BU of 7q62 by Molmil
Structure of TEV cleaved A2ML1 dimer (A2ML1-TT dimer)
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Alpha-2-macroglobulin-like protein 1
著者Nielsen, N.S, Zarantonello, A, Andersen, G.R.
登録日2021-11-05
公開日2022-04-20
最終更新日2022-11-02
実験手法ELECTRON MICROSCOPY (3.18 Å)
主引用文献Cryo-EM structures of human A2ML1 elucidate the protease-inhibitory mechanism of the A2M family.
Nat Commun, 13, 2022
7B5D
DownloadVisualize
BU of 7b5d by Molmil
Structure of calcium-free mTMEM16A(ac)-I551A chloride channel at 3.3 A resolution
分子名称: Anoctamin-1
著者Lam, A.K.M, Rheinberger, J, Paulino, C, Dutzler, R.
登録日2020-12-03
公開日2021-02-10
最終更新日2021-02-17
実験手法ELECTRON MICROSCOPY (3.3 Å)
主引用文献Gating the pore of the calcium-activated chloride channel TMEM16A.
Nat Commun, 12, 2021
6V1R
DownloadVisualize
BU of 6v1r by Molmil
Crystal structure of iAChSnFR Fluorescent Acetylcholine Sensor precursor binding protein
分子名称: 2-[N-CYCLOHEXYLAMINO]ETHANE SULFONIC ACID, ACETYLCHOLINE, DI(HYDROXYETHYL)ETHER, ...
著者Fan, C, Borden, P.M, Looger, L.L, Lester, H.A, Rees, D.C.
登録日2019-11-21
公開日2020-11-25
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.64 Å)
主引用文献A genetically encoded fluorescent sensor for in vivo acetylcholine detection
To Be Published
5MAY
DownloadVisualize
BU of 5may by Molmil
STRUCTURE OF THE LECB LECTIN FROM PSEUDOMONAS AERUGINOSA STRAIN PA14 IN COMPLEX WITH 2-Thiophenesulfonamide-N-(beta-L-fucopyranosyl methyl)
分子名称: CALCIUM ION, Fucose-binding lectin PA-IIL, N-methyl-2-thiophenesulfonamide, ...
著者Sommer, R, Imberty, A, Titz, A, Varrot, A.
登録日2016-11-07
公開日2017-12-20
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Glycomimetic, Orally Bioavailable LecB Inhibitors Block Biofilm Formation of Pseudomonas aeruginosa.
J. Am. Chem. Soc., 140, 2018
6ETV
DownloadVisualize
BU of 6etv by Molmil
Crystal structure of KDM4D with tetrazolhydrazide compound 2
分子名称: 1,2-ETHANEDIOL, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, CHLORIDE ION, ...
著者Malecki, P.H, Link, A, Weiss, M.S, Heinemann, U.
登録日2017-10-27
公開日2019-02-27
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.18 Å)
主引用文献Structure-Based Screening of Tetrazolylhydrazide Inhibitors versus KDM4 Histone Demethylases.
Chemmedchem, 14, 2019
7RZD
DownloadVisualize
BU of 7rzd by Molmil
CRYSTAL STRUCTURE OF HLA-B*07:02 IN COMPLEX WITH MLL(747-755) PEPTIDE
分子名称: Beta-2-microglobulin, CHLORIDE ION, GLYCEROL, ...
著者Patskovsky, Y, Patskovska, L, Nyovanie, S, Natarajan, A, Joshi, B, Morin, B, Brittsan, C, Huber, O, Gordon, S, Michelet, X, Schmitzberger, F, Stein, R, Findeis, M, Hurwitz, A, Van Dijk, M, Buell, J, Underwood, D, Krogsgaard, M.
登録日2021-08-27
公開日2022-11-02
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.82 Å)
主引用文献Molecular mechanism of phosphopeptide neoantigen immunogenicity.
Nat Commun, 14, 2023
7S8A
DownloadVisualize
BU of 7s8a by Molmil
STRUCTURE OF HLA-B*07:02 IN COMPLEX WITH MLL(747-755) PHOSPHOPEPTIDE, CUBIC CRYSTAL FORM
分子名称: 3,6,9,12,15,18,21-HEPTAOXATRICOSANE-1,23-DIOL, ACETATE ION, Beta-2-microglobulin, ...
著者Patskovska, L, Patskovsky, Y, Nyovanie, S, Natarajan, A, Joshi, B, Morin, B, Brittsan, C, Huber, O, Gordon, S, Michelet, X, Schmitzberger, F, Stein, R, Findeis, M, Hurwitz, A, Van Dijk, M, Buell, J, Underwood, D, Krogsgaard, M.
登録日2021-09-17
公開日2022-11-02
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Molecular mechanism of phosphopeptide neoantigen immunogenicity.
Nat Commun, 14, 2023
8T28
DownloadVisualize
BU of 8t28 by Molmil
The crystal structure of SrtC2 sortase from Actinomyces oris
分子名称: CHLORIDE ION, Class C sortase, PHOSPHATE ION
著者Osipiuk, J, Chang, C, Ton-That, H.L, Ton-That, H, Joachimiak, A, Center for Structural Biology of Infectious Diseases (CSBID)
登録日2023-06-05
公開日2024-04-17
最終更新日2024-06-19
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Molecular basis for dual functions in pilus assembly modulated by the lid of a pilus-specific sortase.
J.Biol.Chem., 300, 2024
6S38
DownloadVisualize
BU of 6s38 by Molmil
Ligand binding domain of the P. putida receptor PcaY_PP in complex with quinate
分子名称: (1S,3R,4S,5R)-1,3,4,5-tetrahydroxycyclohexanecarboxylic acid, Aromatic acid chemoreceptor
著者Gavira, J.A, Mantilla, M.A, Fernandez, M, Krell, T.
登録日2019-06-24
公開日2020-10-21
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献The structural basis for signal promiscuity in a bacterial chemoreceptor.
Febs J., 288, 2021
6EUP
DownloadVisualize
BU of 6eup by Molmil
Crystal structure of Neisseria meningitidis NadA variant 3 double mutant A33I-I38L
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, 1,2-ETHANEDIOL, Adhesin A, ...
著者Dello Iacono, L, Liguori, A, Malito, E, Bottomley, M.J.
登録日2017-10-31
公開日2018-10-10
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.65 Å)
主引用文献NadA3 Structures Reveal Undecad Coiled Coils and LOX1 Binding Regions Competed by Meningococcus B Vaccine-Elicited Human Antibodies.
MBio, 9, 2018
7N1Z
DownloadVisualize
BU of 7n1z by Molmil
NMR structure of native PnIA
分子名称: Alpha-conotoxin PnIA
著者Conibear, A.C, Rosengren, K.J, Lee, H.S.
登録日2021-05-28
公開日2021-11-17
最終更新日2023-11-15
実験手法SOLUTION NMR
主引用文献Posttranslational modifications of alpha-conotoxins: sulfotyrosine and C-terminal amidation stabilise structures and increase acetylcholine receptor binding.
Rsc Med Chem, 12, 2021
5JEI
DownloadVisualize
BU of 5jei by Molmil
Crystal structure of the GluA2 LBD in complex with FW
分子名称: 1,2-ETHANEDIOL, 2-(2-METHOXYETHOXY)ETHANOL, 2-AMINO-3-(5-FLUORO-2,4-DIOXO-3,4-DIHYDRO-2H-PYRIMIDIN-1-YL)-PROPIONIC ACID, ...
著者Eibl, C, Salazar, H, Chebli, M, Plested, A.J.R.
登録日2016-04-18
公開日2017-02-22
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.229 Å)
主引用文献Mechanism of partial agonism in AMPA-type glutamate receptors.
Nat Commun, 8, 2017
6USP
DownloadVisualize
BU of 6usp by Molmil
Telomerase Reverse Transcriptase product complex, TERT:DNA
分子名称: DNA (5'-D(P*GP*GP*TP*CP*AP*GP*GP*TP*CP*AP*GP*GP*TP*CP*AP*G)-3'), DNA/RNA (5'-R(*CP*UP*GP*AP*CP*CP*UP*GP*AP*C)-D(P*CP*T)-R(P*GP*AP*C)-D(P*C)-3'), MAGNESIUM ION, ...
著者Schaich, M.A, Freudenthal, B.D.
登録日2019-10-28
公開日2020-06-17
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (3.56 Å)
主引用文献Mechanisms of nucleotide selection by telomerase.
Elife, 9, 2020
6RFF
DownloadVisualize
BU of 6rff by Molmil
Human protein kinase CK2 alpha in complex with 2-cyano-2-propenamide compound 7
分子名称: (~{E})-~{N}-(5-bromanyl-1,3,4-thiadiazol-2-yl)-2-cyano-3-(3-nitro-4-oxidanyl-phenyl)prop-2-enamide, 1,2-ETHANEDIOL, Casein kinase II subunit alpha, ...
著者Dalle Vedove, A, Zanforlin, E, Ribaudo, G, Zagotto, G, Battistutta, R, Lolli, G.
登録日2019-04-14
公開日2020-04-08
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献A novel class of selective CK2 inhibitors targeting its open hinge conformation.
Eur.J.Med.Chem., 195, 2020
6OSZ
DownloadVisualize
BU of 6osz by Molmil
High Resolution Structure of the Monoclinic Form of Thermomyces Lanuginosa Lipase Complexed with Its Catalytic Products
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-hydroxy-3-(octadecanoyloxy)propyl pentacosanoate, CALCIUM ION, ...
著者McPherson, A.
登録日2019-05-02
公開日2024-05-01
実験手法X-RAY DIFFRACTION (1.43 Å)
主引用文献The Crystal Structures of Thermomyces (Humicola) Lanuginosa Lipase in Complex with Enzymatic Reactants
Curr Enzym Inhib, 16, 2020

223166

件を2024-07-31に公開中

PDB statisticsPDBj update infoContact PDBjnumon