Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 88675 件

7QRI
DownloadVisualize
BU of 7qri by Molmil
Regulatory domain dimer of tryptophan hydroxylase 2 in complex with L-Phe
分子名称: PHENYLALANINE, Tryptophan 5-hydroxylase 2
著者Vedel, I.M, Prestel, A, Harris, P, Peters, G.H.J, Kragelund, B.B.
登録日2022-01-11
公開日2023-05-03
最終更新日2024-06-19
実験手法SOLUTION NMR
主引用文献Structural characterization of human tryptophan hydroxylase 2 reveals that L-Phe is superior to L-Trp as the regulatory domain ligand.
Structure, 31, 2023
4YPS
DownloadVisualize
BU of 4yps by Molmil
(R)-2-Phenylpyrrolidine Substitute Imidazopyridazines: a New Class of Potent and Selective Pan-TRK Inhibitors
分子名称: 4-{6-[(3R)-3-(3-fluorophenyl)morpholin-4-yl]imidazo[1,2-b]pyridazin-3-yl}benzonitrile, High affinity nerve growth factor receptor, SULFATE ION
著者Kreusch, A, Rucker, P, Molteni, V, Loren, J.
登録日2015-03-13
公開日2015-06-03
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.1012 Å)
主引用文献(R)-2-Phenylpyrrolidine Substituted Imidazopyridazines: A New Class of Potent and Selective Pan-TRK Inhibitors.
Acs Med.Chem.Lett., 6, 2015
7B6D
DownloadVisualize
BU of 7b6d by Molmil
Drosophila melanogaster TRAPPCore (C1, C2, C2L, C3a/b, C4, C5, C6 subunits)
分子名称: GEO08327p1, Probable trafficking protein particle complex subunit 2, TRAPPC2L, ...
著者Galindo, A, Munro, S, Planelles-Herrero, V.J, Degliesposti, G.
登録日2020-12-07
公開日2021-06-09
最終更新日2024-05-01
実験手法ELECTRON MICROSCOPY (4.27 Å)
主引用文献Cryo-EM structure of metazoan TRAPPIII, the multi-subunit complex that activates the GTPase Rab1.
Embo J., 40, 2021
5N39
DownloadVisualize
BU of 5n39 by Molmil
cAMP-dependent Protein Kinase A from Cricetulus griseus in complex with fragment like molecule 2-(2,3-dihydrobenzo[b][1,4]dioxin-6-yl)pyrrolidine
分子名称: (2~{S})-2-(2,3-dihydro-1,4-benzodioxin-6-yl)pyrrolidin-1-ium, (4S)-2-METHYL-2,4-PENTANEDIOL, DIMETHYL SULFOXIDE, ...
著者Siefker, C, Heine, A, Klebe, G.
登録日2017-02-08
公開日2018-02-28
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.45 Å)
主引用文献A crystallographic fragment study with cAMP-dependent protein kinase A
To Be Published
6X4X
DownloadVisualize
BU of 6x4x by Molmil
B24Y DKP insulin
分子名称: Insulin, Insulin chain A
著者Weiss, M.A, Yang, Y.
登録日2020-05-24
公開日2020-08-05
最終更新日2023-06-14
実験手法SOLUTION NMR
主引用文献Evolution of insulin at the edge of foldability and its medical implications.
Proc.Natl.Acad.Sci.USA, 117, 2020
5N3K
DownloadVisualize
BU of 5n3k by Molmil
cAMP-dependent Protein Kinase A from Cricetulus griseus in complex with fragment like molecule O-guanidino-L-homoserine
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, DIMETHYL SULFOXIDE, L-CANAVANINE, ...
著者Siefker, C, Heine, A, Klebe, G.
登録日2017-02-08
公開日2018-02-28
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.33 Å)
主引用文献A crystallographic fragment study with cAMP-dependent protein kinase A
To Be Published
5N4X
DownloadVisualize
BU of 5n4x by Molmil
Crystal structure of human Pim-1 kinase in complex with a consensuspeptide and fragment like molekule 4,5-dibromothiophene-2-carbohydrazide
分子名称: 4,5-bis(bromanyl)thiophene-2-carbohydrazide, Pimtide, Serine/threonine-protein kinase pim-1
著者Siefker, C, Heine, A, Klebe, G.
登録日2017-02-11
公開日2018-02-28
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献A crystallographic fragment study with human Pim-1 kinase
to be published
7B70
DownloadVisualize
BU of 7b70 by Molmil
TRAPPCore plus C8 (355-596) and C11 (1-718) from MiniTRAPPIII
分子名称: FI18195p1, GEO08327p1, Probable trafficking protein particle complex subunit 2, ...
著者Galindo, A, Munro, S, Planelles-Herrero, V.J.
登録日2020-12-09
公開日2021-06-09
最終更新日2024-05-01
実験手法ELECTRON MICROSCOPY (4 Å)
主引用文献Cryo-EM structure of metazoan TRAPPIII, the multi-subunit complex that activates the GTPase Rab1.
Embo J., 40, 2021
6T6K
DownloadVisualize
BU of 6t6k by Molmil
Y201W mutant of the orange carotenoid protein from Synechocystis at pH 6.5
分子名称: 1,2-ETHANEDIOL, CHLORIDE ION, GLYCINE, ...
著者Sluchanko, N.N, Gushchin, I, Botnarevskiy, V.S, Slonimskiy, Y.B, Remeeva, A, Kovalev, K, Stepanov, A.V, Gordeliy, V, Maksimov, E.G.
登録日2019-10-18
公開日2020-11-18
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.37 Å)
主引用文献Role of hydrogen bond alternation and charge transfer states in photoactivation of the Orange Carotenoid Protein.
Commun Biol, 4, 2021
5N5U
DownloadVisualize
BU of 5n5u by Molmil
Structure of p-boronophenylalanyl tRNA synthetase in complex with p-boronophenylalanine and adenosine monophosphate
分子名称: 4-Borono-L-phenylalanine, ADENOSINE MONOPHOSPHATE, CHLORIDE ION, ...
著者Schiefner, A, Skerra, A.
登録日2017-02-14
公開日2018-02-14
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Structural Basis for the Specific Cotranslational Incorporation of p-Boronophenylalanine into Biosynthetic Proteins.
Biochemistry, 57, 2018
8UUW
DownloadVisualize
BU of 8uuw by Molmil
SARS-CoV-2 papain-like protease (PLpro) with inhibitor Jun12145
分子名称: 5-[2-(dimethylamino)ethoxy]-2-methyl-N-{(1R)-1-[(3P,5M)-3-(1-methyl-1H-pyrazol-4-yl)-5-(1,3-thiazol-5-yl)phenyl]ethyl}benzamide, ACETATE ION, CHLORIDE ION, ...
著者Ansari, A, Tan, B, Ruiz, F.X, Arnold, E, Wang, J.
登録日2023-11-02
公開日2024-04-03
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献Design of a SARS-CoV-2 papain-like protease inhibitor with antiviral efficacy in a mouse model.
Science, 383, 2024
5N3A
DownloadVisualize
BU of 5n3a by Molmil
cAMP-dependent Protein Kinase A from Cricetulus griseus in complex with fragment like molecule 4-methyl-5-(1-methylimidazol-2-yl)-1,3-thiazol-2-amine
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, 4-methyl-5-(1-methyl-1H-imidazol-2-yl)-1,3-thiazol-2-amine, DIMETHYL SULFOXIDE, ...
著者Siefker, C, Heine, A, Klebe, G.
登録日2017-02-08
公開日2018-02-28
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.404 Å)
主引用文献A crystallographic fragment study with cAMP-dependent protein kinase A
To Be Published
5N3I
DownloadVisualize
BU of 5n3i by Molmil
cAMP-dependent Protein Kinase A from Cricetulus griseus in complex with fragment like molecule methyl (2S)-2-amino-3-phenylpropanoate
分子名称: DIMETHYL SULFOXIDE, [(2~{S})-1-methoxy-1-oxidanylidene-3-phenyl-propan-2-yl]azanium, cAMP-dependent protein kinase catalytic subunit alpha
著者Siefker, C, Heine, A, Klebe, G.
登録日2017-02-08
公開日2018-02-28
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.14 Å)
主引用文献A crystallographic fragment study with cAMP-dependent protein kinase A
To Be Published
7ZUD
DownloadVisualize
BU of 7zud by Molmil
Crystal structure of HIV-1 capsid IP6-CPSF6 complex
分子名称: Capsid protein p24, Cleavage and polyadenylation specificity factor subunit 6, INOSITOL HEXAKISPHOSPHATE
著者Nicastro, G, Taylor, I.A.
登録日2022-05-12
公開日2022-07-27
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.93 Å)
主引用文献CP-MAS and Solution NMR Studies of Allosteric Communication in CA-assemblies of HIV-1.
J.Mol.Biol., 434, 2022
8D3H
DownloadVisualize
BU of 8d3h by Molmil
Crystal structure of human Apoptosis-Inducing Factor (AIF) W196A mutant complexed with 7-chloroquinolin-4-amine
分子名称: 1,2-ETHANEDIOL, 7-chloroquinolin-4-amine, Apoptosis-inducing factor 1, ...
著者Brosey, C.A, Tainer, J.A.
登録日2022-06-01
公開日2023-11-08
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (2.51 Å)
主引用文献Chemical screening by time-resolved X-ray scattering to discover allosteric probes.
Nat.Chem.Biol., 2024
7AKR
DownloadVisualize
BU of 7akr by Molmil
Human ADP-ribosylserine hydrolase ARH3 mutant E41A in complex with ADP-ribose dimer
分子名称: 1,2-ETHANEDIOL, ADP-ribose glycohydrolase ARH3, CHLORIDE ION, ...
著者Ariza, A.
登録日2020-10-02
公開日2021-06-16
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Mechanistic insights into the three steps of poly(ADP-ribosylation) reversal.
Nat Commun, 12, 2021
5ISJ
DownloadVisualize
BU of 5isj by Molmil
Endothiapepsin in complex with chiral chlorinated primary amine fragment
分子名称: (1S)-2-amino-1-(4-chlorophenyl)ethan-1-ol, ACETATE ION, DIMETHYL SULFOXIDE, ...
著者Radeva, N, Heine, A, Klebe, G.
登録日2016-03-15
公開日2017-03-29
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.651 Å)
主引用文献Crystallographic Fragment Screening of an Entire Library
to be published
6W49
DownloadVisualize
BU of 6w49 by Molmil
Trypanosoma cruzi Malic Enzyme in complex with inhibitor (MEC010)
分子名称: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, CITRIC ACID, Malic enzyme, ...
著者Mercaldi, G.F, Fagundes, M, Faria, J.N, Cordeiro, A.T.
登録日2020-03-10
公開日2021-04-07
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Trypanosoma cruzi Malic Enzyme Is the Target for Sulfonamide Hits from the GSK Chagas Box.
Acs Infect Dis., 7, 2021
6W57
DownloadVisualize
BU of 6w57 by Molmil
Trypanosoma cruzi Malic Enzyme in complex with inhibitor (MEC069)
分子名称: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, Malic enzyme, ~{N}-[5-[[4-[bis(fluoranyl)methoxy]phenyl]sulfamoyl]-2-chloranyl-phenyl]-3,5-bis(fluoranyl)benzamide
著者Mercaldi, G.F, Fagundes, M, Faria, J.N, Cordeiro, A.T.
登録日2020-03-12
公開日2021-04-07
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.78 Å)
主引用文献Trypanosoma cruzi Malic Enzyme Is the Target for Sulfonamide Hits from the GSK Chagas Box.
Acs Infect Dis., 7, 2021
7AKS
DownloadVisualize
BU of 7aks by Molmil
Human ADP-ribosylserine hydrolase ARH3 mutant E41A in complex with H2B-S7-mar peptide
分子名称: 1,2-ETHANEDIOL, ACETATE ION, ADP-ribose glycohydrolase ARH3, ...
著者Ariza, A.
登録日2020-10-02
公開日2021-06-16
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.86 Å)
主引用文献Mechanistic insights into the three steps of poly(ADP-ribosylation) reversal.
Nat Commun, 12, 2021
6X9S
DownloadVisualize
BU of 6x9s by Molmil
HIV-1 Envelope Glycoprotein BG505 SOSIP.664 expressed in stable CHO cells in complex with RM20A3 Fab
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, HIV-1 Envelope Glycoprotein BG505 SOSIP.664 gp120, ...
著者Berndsen, Z.T, Ward, A.B.
登録日2020-06-03
公開日2020-11-04
最終更新日2020-11-25
実験手法ELECTRON MICROSCOPY (3.1 Å)
主引用文献Visualization of the HIV-1 Env glycan shield across scales.
Proc.Natl.Acad.Sci.USA, 117, 2020
5N4V
DownloadVisualize
BU of 5n4v by Molmil
Crystal structure of human Pim-1 kinase in complex with a consensuspeptide and fragment like molekule 2-cyclopropyl-4,5-dimethylthieno[5,4-d]pyrimidine-6-carboxylic acid
分子名称: 2-cyclopropyl-4,5-dimethyl-thieno[2,3-d]pyrimidine-6-carboxylic acid, GLYCEROL, Pimtide, ...
著者Siefker, C, Heine, A, Klebe, G.
登録日2017-02-11
公開日2018-02-28
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献A crystallographic fragment study with human Pim-1 kinase
to be published
6W53
DownloadVisualize
BU of 6w53 by Molmil
Trypanosoma cruzi Malic Enzyme in complex with inhibitor (MEC070)
分子名称: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, Malic enzyme, N-(2-chloro-5-{[4-(trifluoromethoxy)phenyl]sulfamoyl}phenyl)-3,5-difluorobenzamide
著者Mercaldi, G.F, Fagundes, M, Faria, J.N, Cordeiro, A.T.
登録日2020-03-12
公開日2021-04-07
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Trypanosoma cruzi Malic Enzyme Is the Target for Sulfonamide Hits from the GSK Chagas Box.
Acs Infect Dis., 7, 2021
6W56
DownloadVisualize
BU of 6w56 by Molmil
Trypanosoma cruzi Malic Enzyme in complex with inhibitor (MEC062)
分子名称: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, Malic enzyme, ~{N}-[3-[[4-[bis(fluoranyl)methoxy]phenyl]sulfamoyl]phenyl]-3,5-bis(fluoranyl)benzamide
著者Mercaldi, G.F, Fagundes, M, Faria, J.N, Cordeiro, A.T.
登録日2020-03-12
公開日2021-04-07
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Trypanosoma cruzi Malic Enzyme Is the Target for Sulfonamide Hits from the GSK Chagas Box.
Acs Infect Dis., 7, 2021
4YTB
DownloadVisualize
BU of 4ytb by Molmil
Crystal structure of Porphyromonas gingivalis peptidylarginine deiminase (PPAD) in complex with dipeptide Asp-Gln.
分子名称: ASPARTIC ACID, AZIDE ION, CHLORIDE ION, ...
著者Goulas, T, Mizgalska, D, Garcia-Ferrer, I, Kantyka, T, Guevara, T, Szmigielski, B, Sroka, A, Millan, C, Uson, I, Veillard, F, Potempa, B, Mydel, P, Sola, M, Potempa, J, Gomis-Ruth, F.X.
登録日2015-03-17
公開日2015-07-01
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Structure and mechanism of a bacterial host-protein citrullinating virulence factor, Porphyromonas gingivalis peptidylarginine deiminase.
Sci Rep, 5, 2015

223166

件を2024-07-31に公開中

PDB statisticsPDBj update infoContact PDBjnumon