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PDB: 88608 件
1TJA
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BU of 1tja by Molmil
Fitting of gp8, gp9, and gp11 into the cryo-EM reconstruction of the bacteriophage T4 contracted tail
分子名称: Baseplate structural protein Gp11, Baseplate structural protein Gp8, Baseplate structural protein Gp9
著者Leiman, P.G, Chipman, P.R, Kostyuchenko, V.A, Mesyanzhinov, V.V, Rossmann, M.G.
登録日2004-06-03
公開日2004-08-31
最終更新日2024-02-14
実験手法ELECTRON MICROSCOPY (16 Å)
主引用文献Three-dimensional rearrangement of proteins in the tail of bacteriophage t4 on infection of its host
Cell(Cambridge,Mass.), 118, 2004
2IA9
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BU of 2ia9 by Molmil
Structural Genomics, the crystal structure of SpoVG from Bacillus subtilis subsp. subtilis str. 168
分子名称: DI(HYDROXYETHYL)ETHER, Putative septation protein spoVG, SULFATE ION
著者Tan, K, Borovilos, M, Abdullah, J, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
登録日2006-09-07
公開日2006-10-17
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献The crystal structure of SpoVG from Bacillus subtilis subsp. subtilis str. 168
To be Published
7SXZ
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BU of 7sxz by Molmil
Cryo-EM structure of the SARS-CoV-2 D614G,L452R mutant spike protein ectodomain bound to human ACE2 ectodomain (global refinement)
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Processed angiotensin-converting enzyme 2, ...
著者Zhu, X, Mannar, D, Saville, J.W, Srivastava, S.S, Berezuk, A.M, Zhou, S, Tuttle, K.S, Kim, A, Li, W, Dimitrov, D.S, Subramaniam, S.
登録日2021-11-24
公開日2021-12-29
最終更新日2022-01-05
実験手法ELECTRON MICROSCOPY (2.61 Å)
主引用文献Structural analysis of receptor binding domain mutations in SARS-CoV-2 variants of concern that modulate ACE2 and antibody binding.
Cell Rep, 37, 2021
7SY1
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BU of 7sy1 by Molmil
Cryo-EM structure of the SARS-CoV-2 D614G,N501Y mutant spike protein ectodomain bound to human ACE2 ectodomain (global refinement)
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Processed angiotensin-converting enzyme 2, ...
著者Zhu, X, Mannar, D, Saville, J.W, Srivastava, S.S, Berezuk, A.M, Zhou, S, Tuttle, K.S, Kim, A, Li, W, Dimitrov, D.S, Subramaniam, S.
登録日2021-11-24
公開日2021-12-29
最終更新日2022-01-05
実験手法ELECTRON MICROSCOPY (2.83 Å)
主引用文献Structural analysis of receptor binding domain mutations in SARS-CoV-2 variants of concern that modulate ACE2 and antibody binding.
Cell Rep, 37, 2021
7SXW
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BU of 7sxw by Molmil
Cryo-EM structure of the SARS-CoV-2 D614G,N501Y,E484K,K417T mutant spike protein ectodomain
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein
著者Zhu, X, Mannar, D, Saville, J.W, Srivastava, S.S, Berezuk, A.M, Zhou, S, Tuttle, K.S, Kim, A, Li, W, Dimitrov, D.S, Subramaniam, S.
登録日2021-11-24
公開日2021-12-29
最終更新日2022-01-05
実験手法ELECTRON MICROSCOPY (2.85 Å)
主引用文献Structural analysis of receptor binding domain mutations in SARS-CoV-2 variants of concern that modulate ACE2 and antibody binding.
Cell Rep, 37, 2021
7SXR
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BU of 7sxr by Molmil
Cryo-EM structure of the SARS-CoV-2 D614G mutant spike protein ectodomain
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein
著者Zhu, X, Mannar, D, Saville, J.W, Srivastava, S.S, Berezuk, A.M, Zhou, S, Tuttle, K.S, Kim, A, Li, W, Dimitrov, D.S, Subramaniam, S.
登録日2021-11-24
公開日2021-12-29
最終更新日2022-01-05
実験手法ELECTRON MICROSCOPY (3 Å)
主引用文献Structural analysis of receptor binding domain mutations in SARS-CoV-2 variants of concern that modulate ACE2 and antibody binding.
Cell Rep, 37, 2021
7SXV
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BU of 7sxv by Molmil
Cryo-EM structure of the SARS-CoV-2 D614G,N501Y,E484K,K417N mutant spike protein ectodomain
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein
著者Zhu, X, Mannar, D, Saville, J.W, Srivastava, S.S, Berezuk, A.M, Zhou, S, Tuttle, K.S, Kim, A, Li, W, Dimitrov, D.S, Subramaniam, S.
登録日2021-11-24
公開日2021-12-29
最終更新日2022-01-05
実験手法ELECTRON MICROSCOPY (2.79 Å)
主引用文献Structural analysis of receptor binding domain mutations in SARS-CoV-2 variants of concern that modulate ACE2 and antibody binding.
Cell Rep, 37, 2021
7SXU
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BU of 7sxu by Molmil
Cryo-EM structure of the SARS-CoV-2 D614G,N501Y,E484K mutant spike protein ectodomain
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein
著者Zhu, X, Mannar, D, Saville, J.W, Srivastava, S.S, Berezuk, A.M, Zhou, S, Tuttle, K.S, Kim, A, Li, W, Dimitrov, D.S, Subramaniam, S.
登録日2021-11-24
公開日2021-12-29
最終更新日2022-01-05
実験手法ELECTRON MICROSCOPY (3 Å)
主引用文献Structural analysis of receptor binding domain mutations in SARS-CoV-2 variants of concern that modulate ACE2 and antibody binding.
Cell Rep, 37, 2021
7SXX
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BU of 7sxx by Molmil
Cryo-EM structure of the SARS-CoV-2 D614G mutant spike protein ectodomain bound to human ACE2 ectodomain (global refinement)
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Processed angiotensin-converting enzyme 2, ...
著者Zhu, X, Mannar, D, Saville, J.W, Srivastava, S.S, Berezuk, A.M, Zhou, S, Tuttle, K.S, Kim, A, Li, W, Dimitrov, D.S, Subramaniam, S.
登録日2021-11-24
公開日2021-12-29
最終更新日2022-01-05
実験手法ELECTRON MICROSCOPY (2.66 Å)
主引用文献Structural analysis of receptor binding domain mutations in SARS-CoV-2 variants of concern that modulate ACE2 and antibody binding.
Cell Rep, 37, 2021
1SW3
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BU of 1sw3 by Molmil
Triosephosphate isomerase from Gallus gallus, loop 6 mutant T175V
分子名称: 2-PHOSPHOGLYCOLIC ACID, Triosephosphate isomerase
著者Kursula, I, Salin, M, Sun, J, Norledge, B.V, Haapalainen, A.M, Sampson, N.S, Wierenga, R.K.
登録日2004-03-30
公開日2004-08-24
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.03 Å)
主引用文献Understanding protein lids: structural analysis of active hinge mutants in triosephosphate isomerase
Protein Eng.Des.Sel., 17, 2004
7TCB
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BU of 7tcb by Molmil
Crystal Structure of the YaeQ Family Protein VPA0551 from Vibrio parahaemolyticus
分子名称: YaeQ family protein VPA0551
著者Kim, Y, Mulligan, R, Maltseva, N, Gu, M, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
登録日2021-12-23
公開日2022-01-05
最終更新日2023-04-19
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Crystal Structure of the YaeQ Family Protein VPA0551 from Vibrio parahaemolyticus
To Be Published
2I2L
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BU of 2i2l by Molmil
X-ray Crystal Structure of Protein yopX from Bacillus subtilis. Northeast Structural Genomics Consortium Target SR411.
分子名称: YopX protein
著者Vorobiev, S.M, Zhou, W, Seetharaman, J, Forouhar, F, Kuzin, A.A, Ho, C.K, Janjua, H, Cunningham, K, Ma, L.C, Xiao, R, Liu, J, Acton, T, Montelione, G.T, Hunt, J.F, Tong, L, Northeast Structural Genomics Consortium (NESG)
登録日2006-08-16
公開日2006-08-29
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Crystal structure of the hypothetical protein yopX from Bacillus subtilis
To be Published
3X30
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BU of 3x30 by Molmil
Crystal structure of metallo-beta-lactamase from Thermotoga maritima
分子名称: MANGANESE (II) ION, NICKEL (II) ION, UPF0173 metal-dependent hydrolase TM_1162
著者Choi, H.J, Kim, H.J, Matsuura, A, Mikami, B, Yoon, H.J, Lee, H.H.
登録日2015-01-07
公開日2016-02-17
実験手法X-RAY DIFFRACTION (1.921 Å)
主引用文献Crystal structure of metallo-beta-lactamase from Thermotoga maritima
To be Published
8HVS
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BU of 8hvs by Molmil
Solution Structure of the Antimicrobial Peptide HT-2
分子名称: ARG-PHE-LEU-ARG-ARG-ILE-PHE-PHE-PHE-PHE
著者Li, S, Yang, A.
登録日2022-12-27
公開日2023-10-25
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Design and evaluation of tadpole-like conformational antimicrobial peptides.
Commun Biol, 6, 2023
2I9O
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BU of 2i9o by Molmil
Design of bivalent miniprotein consisting of two independent elements, a b-hairpin peptide and a-helix peptide, tethered by eight glycines
分子名称: MHB8A peptide
著者Pantoja-Uceda, D, Pineda-Lucena, A.
登録日2006-09-06
公開日2007-09-18
最終更新日2024-05-08
実験手法SOLUTION NMR
主引用文献Design of minimal independt protein motifs able to fold autonomously
To be Published
1THF
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BU of 1thf by Molmil
CYCLASE SUBUNIT OF IMIDAZOLEGLYCEROLPHOSPHATE SYNTHASE FROM THERMOTOGA MARITIMA
分子名称: HISF PROTEIN, PHOSPHATE ION
著者Lang, D.A, Wilmanns, M.
登録日1998-09-17
公開日2000-07-14
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (1.45 Å)
主引用文献Structural evidence for evolution of the beta/alpha barrel scaffold by gene duplication and fusion.
Science, 289, 2000
6PGY
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BU of 6pgy by Molmil
MTSL labelled T4 lysozyme pseudo-wild type K65C mutant
分子名称: 2-HYDROXYETHYL DISULFIDE, CHLORIDE ION, Endolysin, ...
著者Cuneo, M.J, Myles, D.A, Li, L.
登録日2019-06-25
公開日2020-07-01
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Making hydrogens stand out: Enhanced neutron diffraction from biological crystals using dynamic nuclear polarization
To be published
2I25
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BU of 2i25 by Molmil
Crystal structure analysis of the nurse shark New antigen Receptor PBLA8 variable domain in complex with lysozyme
分子名称: Lysozyme C, New Antigen Receptor PBLA8
著者Stanfield, R.L, Wilson, I.A.
登録日2006-08-15
公開日2007-03-06
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Maturation of Shark Single-domain (IgNAR) Antibodies: Evidence for Induced-fit Binding
J.Mol.Biol., 367, 2007
3EAP
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BU of 3eap by Molmil
Crystal structure of the RhoGAP domain of ARHGAP11A
分子名称: Rho GTPase-activating protein 11A, UNKNOWN ATOM OR ION
著者Shen, Y, Shen, L, Tong, Y, Tempel, W, MacKenzie, F, Arrowsmith, C.H, Edwards, A.M, Bountra, C, Weigelt, J, Bochkarev, A, Park, H, Structural Genomics Consortium, Structural Genomics Consortium (SGC)
登録日2008-08-26
公開日2008-09-02
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Crystal structure of the RhoGAP domain of ARHGAP11A
To be Published
4IHU
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BU of 4ihu by Molmil
Reduced form of disulfide bond oxdioreductase (DsbG) from Mycobacterium tuberculosis
分子名称: CHLORIDE ION, Isomerase DsbG
著者Harmston, C.A, Goulding, C.W.
登録日2012-12-19
公開日2013-10-30
最終更新日2023-12-06
実験手法X-RAY DIFFRACTION (1.896 Å)
主引用文献Structural and biochemical characterization of the essential DsbA-like disulfide bond forming protein from Mycobacterium tuberculosis.
Bmc Struct.Biol., 13, 2013
3ZCX
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BU of 3zcx by Molmil
Structure of GAPDH from Thermosynechococcus elongatus
分子名称: GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE, NICOTINAMIDE-ADENINE-DINUCLEOTIDE
著者Cotton, C.A.R, Murray, J.W.
登録日2012-11-23
公開日2013-12-11
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2.19 Å)
主引用文献Structure of Gapdh
To be Published
2I6J
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BU of 2i6j by Molmil
Crystal structure of the complex of the archaeal sulfolobus PTP-fold phosphatase with phosphate ion
分子名称: PHOSPHATE ION, Sulfolobus solfataricus protein tyrosine phosphatase
著者Chu, H.M, Wang, A.H.J.
登録日2006-08-29
公開日2007-03-13
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.66 Å)
主引用文献Enzyme-substrate interactions revealed by the crystal structures of the archaeal Sulfolobus PTP-fold phosphatase and its phosphopeptide complexes
Proteins, 66, 2006
3EDU
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BU of 3edu by Molmil
Crystal structure of the ankyrin-binding domain of human erythroid spectrin
分子名称: Spectrin beta chain, erythrocyte
著者Simonovic, M, Stabach, P, Simonovic, I, Steitz, T.A, Morrow, J.S.
登録日2008-09-03
公開日2009-02-10
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献The structure of the ankyrin-binding site of {beta}-spectrin reveals how tandem spectrin-repeats generate unique ligand-binding properties
Blood, 113, 2009
3X2X
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BU of 3x2x by Molmil
Crystal structure of metallo-beta-lactamase H48A from Thermotoga maritima
分子名称: MANGANESE (II) ION, UPF0173 metal-dependent hydrolase TM_1162
著者Choi, H.J, Kim, H.J, Matsuura, A, Mikami, B, Yoon, H.J, Lee, H.H.
登録日2015-01-07
公開日2016-02-17
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (3.42 Å)
主引用文献Crystal structure of metallo-beta-lactamase H48A from Thermotoga maritima
To be Published
3EFL
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BU of 3efl by Molmil
Crystal structure of the VEGFR2 kinase domain in complex with motesanib
分子名称: N-(3,3-dimethyl-2,3-dihydro-1H-indol-6-yl)-2-[(pyridin-4-ylmethyl)amino]pyridine-3-carboxamide, Vascular endothelial growth factor receptor 2
著者Kim, J.L, Whittington, D.A, Long, A.M, Rose, P, Gu, Y, Zhao, H.
登録日2008-09-09
公開日2009-09-15
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Discovery of Motesanib
To be Published

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