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PDB: 88608 件

1TJI
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Crystal Structure of the broadly neutralizing anti-HIV-1 antibody 2F5 in complex with a gp41 17mer epitope
分子名称: 1,2-ETHANEDIOL, Envelope Glycoprotein GP41, ISOPROPYL ALCOHOL, ...
著者Ofek, G, Tang, M, Sambor, A, Katinger, H, Mascola, J.R, Wyatt, R, Kwong, P.D.
登録日2004-06-04
公開日2004-10-05
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structure and mechanistic analysis of the Anti-Human Immunodeficiency Virus type 1 antibody 2F5 in complex with its gp41 epitope
J.Virol., 78, 2004
1T06
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1.9 A Crystal Structure of a Protein of Unknown Function from Bacillus cereus ATCC 14579
分子名称: hypothetical protein
著者Zhang, R, Wu, R, Moy, S, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
登録日2004-04-07
公開日2004-08-03
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献1.9A crystal structure of a hypothetical protein from Bacillus cereus ATCC 14579
To be Published
7TGJ
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Crystal structure of DesD, the desferrioxamine synthetase from the Streptomyces griseoflavus ferrimycin biosynthetic pathway
分子名称: Desferrioxamine synthetase DesD, GLYCEROL, SULFATE ION
著者Patel, K.D, Gulick, A.M.
登録日2022-01-07
公開日2022-07-06
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.85 Å)
主引用文献An acyl-adenylate mimic reveals the structural basis for substrate recognition by the iterative siderophore synthetase DesD.
J.Biol.Chem., 298, 2022
1T2M
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Solution Structure Of The Pdz Domain Of AF-6
分子名称: AF-6 protein
著者Zhou, H, Wu, J.H, Xu, Y.Q, Huang, A.D, Shi, Y.Y.
登録日2004-04-22
公開日2005-02-08
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Solution Structure of AF-6 PDZ Domain and Its Interaction with the C-terminal Peptides from Neurexin and Bcr
J.Biol.Chem., 280, 2005
6JFV
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The crystal structure of 2B-2B complex from keratins 5 and 14 (C367A mutant of K14)
分子名称: Keratin, type I cytoskeletal 14, type II cytoskeletal 5
著者Kim, M.S, Lee, C.H, Coulombe, P.A, Leahy, D.J.
登録日2019-02-12
公開日2020-01-22
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Structure-Function Analyses of a Keratin Heterotypic Complex Identify Specific Keratin Regions Involved in Intermediate Filament Assembly.
Structure, 28, 2020
7SIH
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Crystal Structure of HLA B*3503 in complex with NPDIVIYQY, an 9-mer epitope from HIV-I
分子名称: Beta-2-microglobulin, GLYCEROL, MHC class I antigen, ...
著者Gras, S, Lobos, C.A, Chatzileontiadou, D.S.M.
登録日2021-10-14
公開日2022-11-23
最終更新日2024-06-05
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Molecular insights into the HLA-B35 molecules' classification associated with HIV control.
Immunol.Cell.Biol., 102, 2024
2VIM
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X-ray structure of Fasciola hepatica thioredoxin
分子名称: THIOREDOXIN
著者Line, K, Isupov, M.N, Garcia-Rodriguez, E, Maggioli, G, Parra, F, Littlechild, J.A.
登録日2007-12-05
公開日2008-07-29
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (1.38 Å)
主引用文献The Fasciola Hepatica Thioredoxin: High Resolution Structure Reveals Two Oxidation States.
Mol.Biochem.Parasitol., 161, 2008
6PAA
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E. coli L-asparaginase II mutant (T12V) in complex with L-Asp at pH 5.5
分子名称: ASPARTIC ACID, L-asparaginase 2
著者Lubkowski, J, Wlodawer, A.
登録日2019-06-11
公開日2019-09-04
最終更新日2019-10-02
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Geometric considerations support the double-displacement catalytic mechanism of l-asparaginase.
Protein Sci., 28, 2019
7SIG
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Crystal Structure of HLA B*3501 in complex with NPDIVIYQY, an 9-mer epitope from HIV-I
分子名称: Beta-2-microglobulin, CITRATE ANION, MHC class I antigen, ...
著者Gras, S, Lobos, C.A, Chatzileontiadou, D.S.M.
登録日2021-10-14
公開日2022-11-23
最終更新日2024-06-05
実験手法X-RAY DIFFRACTION (1.741 Å)
主引用文献Molecular insights into the HLA-B35 molecules' classification associated with HIV control.
Immunol.Cell.Biol., 102, 2024
2I3S
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Bub3 complex with Bub1 GLEBS motif
分子名称: Cell cycle arrest protein, Checkpoint serine/threonine-protein kinase
著者Larsen, N.A, Harrison, S.C.
登録日2006-08-20
公開日2007-01-09
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structural analysis of Bub3 interactions in the mitotic spindle checkpoint.
Proc.Natl.Acad.Sci.Usa, 104, 2007
7SJG
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Structure of Dehaloperoxidase B in Complex with Thymoquinone
分子名称: (6R)-4-hydroxy-6-methyl-3-(propan-2-yl)cyclohexa-2,4-dien-1-one, 2-methyl-5-(propan-2-yl)benzene-1,4-diol, Dehaloperoxidase B, ...
著者Ghiladi, R.A, de Serrano, V.S, Malewschik, T, Yun, D.
登録日2021-10-17
公開日2022-11-23
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献The Multifunctional Globin Dehaloperoxidase as a Biocatalyst in the Oxidation of Monoterpenes
To Be Published
2I79
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The crystal structure of the acetyltransferase of GNAT family from Streptococcus pneumoniae
分子名称: ACETYL COENZYME *A, Acetyltransferase, GNAT family
著者Zhang, R.G, Zhou, M, Abdullah, J, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
登録日2006-08-30
公開日2006-10-10
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献The crystal structure of the acetyltransferase of GNAT family from Streptococcus pneumoniae
To be Published
2I8C
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Allosteric inhibition of Staphylococcus aureus D-alanine:D-alanine ligase revealed by crystallographic studies
分子名称: ADENOSINE-5'-DIPHOSPHATE, D-alanine-D-alanine ligase, MAGNESIUM ION, ...
著者Liu, S, Chang, J.S, Herberg, J.T, Horng, M, Tomich, P.K, Lin, A.H, Marotti, K.R.
登録日2006-09-01
公開日2006-09-26
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.46 Å)
主引用文献Allosteric inhibition of Staphylococcus aureus D-alanine:D-alanine ligase revealed by crystallographic studies.
Proc.Natl.Acad.Sci.Usa, 103, 2006
6ICR
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LdCoroCC mutant- C482A
分子名称: 1,2-ETHANEDIOL, Coronin-like protein
著者Karade, S.S, Srivastava, V.K, Ansari, A, Pratap, J.V.
登録日2018-09-06
公開日2019-10-09
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.04 Å)
主引用文献Molecular and structural analysis of a mechanical transition of helices in the L. donovani coronin coiled-coil domain.
Int.J.Biol.Macromol., 143, 2020
6IDS
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Crystal structure of Vibrio cholerae MATE transporter VcmN D35N mutant
分子名称: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, MATE family efflux transporter
著者Kusakizako, T, Claxton, D.P, Tanaka, Y, Maturana, A.D, Kuroda, T, Ishitani, R, Mchaourab, H.S, Nureki, O.
登録日2018-09-11
公開日2019-01-16
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (2.79 Å)
主引用文献Structural Basis of H+-Dependent Conformational Change in a Bacterial MATE Transporter.
Structure, 27, 2019
1TI3
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Solution structure of the Thioredoxin h1 from poplar, a CPPC active site variant
分子名称: thioredoxin H
著者Coudevylle, N, Thureau, A, Hemmerlin, C, Gelhaye, E, Jacquot, J.P, Cung, M.T.
登録日2004-06-02
公開日2004-12-14
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Solution structure of a natural CPPC active site variant, the reduced form of thioredoxin h1 from poplar.
Biochemistry, 44, 2005
6IF7
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Crystal Structure of AA10 Lytic Polysaccharide Monooxygenase from Tectaria macrodonta
分子名称: COPPER (II) ION, Chitin binding protein, GLYCEROL, ...
著者Archana, A, Yadav, S.K, Singh, P.K, Vasudev, P.G.
登録日2018-09-18
公開日2019-04-24
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Insecticidal fern protein Tma12 is possibly a lytic polysaccharide monooxygenase.
Planta, 249, 2019
6ICD
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REGULATION OF AN ENZYME BY PHOSPHORYLATION AT THE ACTIVE SITE
分子名称: ISOCITRATE DEHYDROGENASE
著者Hurley, J.H, Dean, A.M, Sohl, J.L, Koshlandjunior, D.E, Stroud, R.M.
登録日1990-05-30
公開日1991-10-15
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Regulation of an enzyme by phosphorylation at the active site.
Science, 249, 1990
2VD2
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BU of 2vd2 by Molmil
The crystal structure of HisG from B. subtilis
分子名称: ATP PHOSPHORIBOSYLTRANSFERASE
著者Lohkamp, B, Riboldi-Tunniclife, A, Lapthorn, A.J.
登録日2007-09-28
公開日2008-11-04
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.85 Å)
主引用文献The Crystal Structure of Hisg from B. Subtilis
To be Published
3EI1
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Structure of hsDDB1-drDDB2 bound to a 14 bp 6-4 photoproduct containing DNA-duplex
分子名称: 5'-D(*DAP*DCP*DGP*DCP*DGP*DAP*(64T)P*(5PY)P*DGP*DCP*DGP*DCP*DCP*DC)-3', 5'-D(*DTP*DGP*DGP*DGP*DCP*DGP*DCP*DAP*DAP*DTP*DCP*DGP*DCP*DG)-3', DNA damage-binding protein 1, ...
著者Scrima, A, Thoma, N.H.
登録日2008-09-15
公開日2009-01-20
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Structural basis of UV DNA-damage recognition by the DDB1-DDB2 complex.
Cell(Cambridge,Mass.), 135, 2008
2I52
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Crystal structure of protein PTO0218 from Picrophilus torridus, Pfam DUF372
分子名称: CALCIUM ION, CHLORIDE ION, GLYCEROL, ...
著者Ramagopal, U.A, Gilmore, J, Toro, R, Bain, K.T, McKenzie, C, Reyes, C, Sauder, J.M, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
登録日2006-08-23
公開日2006-09-12
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.08 Å)
主引用文献Structure of hypothetical protein PTO0218 from Picrophilus torridus
To be Published
1SZA
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The RNA polymerase II CTD in mRNA processing: beta-turn recognition and beta-spiral model
分子名称: CTD-peptide, PCF11 protein
著者Meinhart, A, Cramer, P.
登録日2004-04-05
公開日2004-07-13
最終更新日2017-10-11
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Recognition of RNA polymerase II carboxy-terminal domain by 3'-RNA-processing factors.
Nature, 430, 2004
3EKU
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Crystal Structure of Monomeric Actin bound to Cytochalasin D
分子名称: (3S,3aR,4S,6S,6aR,7E,10S,12R,13E,15R,15aR)-3-benzyl-6,12-dihydroxy-4,10,12-trimethyl-5-methylidene-1,11-dioxo-2,3,3a,4,5,6,6a,9,10,11,12,15-dodecahydro-1H-cycloundeca[d]isoindol-15-yl acetate, ADENOSINE-5'-TRIPHOSPHATE, Actin-5C, ...
著者Nair, U.B, Joel, P.B, Wan, Q, Lowey, S, Rould, M.A, Trybus, K.M.
登録日2008-09-19
公開日2008-10-07
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Crystal structures of monomeric actin bound to cytochalasin D.
J.Mol.Biol., 384, 2008
1T10
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Phosphoglucose isomerase from Leishmania mexicana in complex with substrate D-fructose-6-phosphate
分子名称: 6-O-phosphono-beta-D-fructofuranose, Glucose-6-phosphate isomerase
著者Cordeiro, A.T, Thiemann, O.T.
登録日2004-04-14
公開日2004-06-29
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.35 Å)
主引用文献The crystal structure of glucose-6-phosphate isomerase from Leishmania mexicana reveals novel active site features
Eur.J.Biochem., 271, 2004
8IJX
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Cryo-EM structure of the gastric proton pump with bound DQ-18
分子名称: 1,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 1-[4-[(5-chloranyl-2-phenylmethoxy-phenyl)methoxy]phenyl]-N-methyl-methanamine, 2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Abe, K, Yokoshima, S, Yoshimori, A.
登録日2023-02-28
公開日2023-08-30
最終更新日2023-10-04
実験手法ELECTRON MICROSCOPY (2.08 Å)
主引用文献Deep learning driven de novo drug design based on gastric proton pump structures.
Commun Biol, 6, 2023

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