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PDB: 89472 件

4ZXX
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FACTOR VIIA IN COMPLEX WITH THE INHIBITOR N-{3-[(2R)-1-{(2R)-2-[(1-aminoisoquinolin-6-yl)amino]-2-phenylacetyl}pyrrolidin-2-yl]-4-(propan-2-ylsulfonyl)phenyl}acetamide
分子名称: CALCIUM ION, Coagulation factor VIIa heavy chain, Coagulation factor VIIa light chain, ...
著者Wei, A.
登録日2015-05-20
公開日2015-07-22
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Structure-Based Design of Macrocyclic Coagulation Factor VIIa Inhibitors.
J.Med.Chem., 58, 2015
7KEP
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avibactam-CDD-1 2 minute complex
分子名称: (2S,5R)-1-formyl-5-[(sulfooxy)amino]piperidine-2-carboxamide, (2S,5R)-7-oxo-6-(sulfooxy)-1,6-diazabicyclo[3.2.1]octane-2-carboxamide, (4S)-2-METHYL-2,4-PENTANEDIOL, ...
著者Smith, C.A, Vakulenko, S.B, Stewart, N.K, Toth, M.
登録日2020-10-11
公開日2021-01-20
最終更新日2021-05-26
実験手法X-RAY DIFFRACTION (1.92 Å)
主引用文献Inhibition of the Clostridioides difficile Class D beta-Lactamase CDD-1 by Avibactam.
Acs Infect Dis., 7, 2021
5NLC
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Structure of PipY, the COG0325 family member of Synechococcus elongatus PCC7942,without PLP
分子名称: PHOSPHATE ION, PipY
著者Tremino, L, Forcada-Nadal, A, Contreras, A, Rubio, V.
登録日2017-04-04
公開日2017-09-13
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Studies on cyanobacterial protein PipY shed light on structure, potential functions, and vitamin B6 -dependent epilepsy.
FEBS Lett., 591, 2017
5HAY
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Crystal structure of Chaetomium thermophilum Nup170 CTD Y905M L1007M L1183M V1292M mutant
分子名称: Nucleoporin NUP170, SODIUM ION
著者Lin, D.H, Fan, Y, Hoelz, A.
登録日2015-12-31
公開日2016-04-20
最終更新日2024-10-09
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Architecture of the symmetric core of the nuclear pore.
Science, 352, 2016
3HV8
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Crystal structure of FimX EAL domain from Pseudomonas aeruginosa bound to c-di-GMP
分子名称: 9,9'-[(2R,3R,3aS,5S,7aR,9R,10R,10aS,12S,14aR)-3,5,10,12-tetrahydroxy-5,12-dioxidooctahydro-2H,7H-difuro[3,2-d:3',2'-j][1,3,7,9,2,8]tetraoxadiphosphacyclododecine-2,9-diyl]bis(2-amino-1,9-dihydro-6H-purin-6-one), Protein FimX
著者Navarro, M.V.A.S, De, N, Bae, N, Sondermann, H.
登録日2009-06-15
公開日2009-08-18
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (1.445 Å)
主引用文献Structural analysis of the GGDEF-EAL domain-containing c-di-GMP receptor FimX.
Structure, 17, 2009
5HCJ
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Cationic Ligand-Gated Ion Channel
分子名称: CHLORIDE ION, DODECYL-BETA-D-MALTOSIDE, Proton-gated ion channel, ...
著者Shahsavar, A, Sauguet, L, Delarue, M.
登録日2016-01-04
公開日2016-04-13
最終更新日2016-04-20
実験手法X-RAY DIFFRACTION (2.95 Å)
主引用文献Sites of Anesthetic Inhibitory Action on a Cationic Ligand-Gated Ion Channel.
Structure, 24, 2016
2HMA
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BU of 2hma by Molmil
The Crystal Structure of tRNA (5-Methylaminomethyl-2-Thiouridylate)-Methyltransferase TrmU from Streptococcus pneumoniae
分子名称: MAGNESIUM ION, Probable tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase, S-ADENOSYLMETHIONINE
著者Kim, Y, Zhou, M, Abdullah, J, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
登録日2006-07-11
公開日2006-08-08
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.41 Å)
主引用文献The Crystal Structure of tRNA (5-Methylaminomethyl-2-Thiouridylate)-Methyltransferase TrmU from Streptococcus pneumoniae
To be Published
7KYC
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Structure of the S. cerevisiae phosphatidylcholine flippase Dnf1-Lem3 complex in the E2P state
分子名称: (2S)-3-(hexadecanoyloxy)-2-[(9Z)-octadec-9-enoyloxy]propyl 2-(trimethylammonio)ethyl phosphate, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Bai, L, You, Q, Jain, B.K, Duan, H.D, Kovach, A, Graham, T.R, Li, H.
登録日2020-12-07
公開日2021-01-06
実験手法ELECTRON MICROSCOPY (2.8 Å)
主引用文献Transport mechanism of P4 ATPase phosphatidylcholine flippases.
Elife, 9, 2020
7L0Q
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Structure of NTS-NTSR1-Gi complex in lipid nanodisc, canonical state, with AHD
分子名称: Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1, Guanine nucleotide-binding protein G(T) subunit gamma-T1, Guanine nucleotide-binding protein G(i) subunit alpha-1, ...
著者Zhang, M, Gui, M, Wang, Z, Gorgulla, C, Yu, J.J, Wu, H, Sun, Z, Klenk, C, Merklinger, L, Morstein, L, Hagn, F, Pluckthun, A, Brown, A, Nasr, M.L, Wagner, G.
登録日2020-12-12
公開日2021-01-06
最終更新日2024-10-09
実験手法ELECTRON MICROSCOPY (4.3 Å)
主引用文献Cryo-EM structure of an activated GPCR-G protein complex in lipid nanodiscs.
Nat.Struct.Mol.Biol., 28, 2021
5E2A
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Crystal structure of NTMT1 in complex with N-terminally methylated SPKRIA peptide
分子名称: GLYCEROL, N-terminal Xaa-Pro-Lys N-methyltransferase 1, RCC1, ...
著者Dong, C, Tempel, W, Bountra, C, Arrowsmith, C.H, Edwards, A.M, Min, J, Structural Genomics Consortium (SGC)
登録日2015-09-30
公開日2015-10-28
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Structural basis for substrate recognition by the human N-terminal methyltransferase 1.
Genes Dev., 29, 2015
5E0S
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BU of 5e0s by Molmil
crystal structure of the active form of the proteolytic complex clpP1 and clpP2
分子名称: ATP-dependent Clp protease proteolytic subunit 1, ATP-dependent Clp protease proteolytic subunit 2
著者LI, M, Wlodawer, A, Maurizi, M.
登録日2015-09-29
公開日2016-02-17
最終更新日2016-04-13
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Structure and Functional Properties of the Active Form of the Proteolytic Complex, ClpP1P2, from Mycobacterium tuberculosis.
J.Biol.Chem., 291, 2016
7KX2
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Spermidine N-acetyltransferase SpeG F149A mutant from Vibrio cholerae
分子名称: Spermidine N(1)-acetyltransferase
著者Le, V.T.B, Tsimbalyuk, S, Lim, E.Q, Solis, A, Gawat, D, Boeck, P, Renolo, R, Forwood, J.K, Kuhn, M.L.
登録日2020-12-03
公開日2020-12-16
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献The Vibrio cholerae SpeG Spermidine/Spermine N -Acetyltransferase Allosteric Loop and beta 6-beta 7 Structural Elements Are Critical for Kinetic Activity.
Front Mol Biosci, 8, 2021
2AJX
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Crystal Structure of Cocaine catalytic Antibody 7A1 Fab' in Complex with Transition State Analog
分子名称: 3-(HYDROXY-PHENYL-PHOSPHINOYLOXY)-8-METHYL-8-AZA-BICYCLO[3.2.1]OCTANE-2-CARBOXYLIC ACID METHYL ESTER, Antibody 7A1 Fab'
著者Zhu, X, Wilson, I.A.
登録日2005-08-02
公開日2006-02-14
最終更新日2024-10-09
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Complete reaction cycle of a cocaine catalytic antibody at atomic resolution.
Structure, 14, 2006
7KY8
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BU of 7ky8 by Molmil
Structure of the S. cerevisiae phosphatidylcholine flippase Dnf2-Lem3 complex in the E1-ATP state
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Alkylphosphocholine resistance protein LEM3, ...
著者Bai, L, You, Q, Jain, B.K, Duan, H.D, Kovach, A, Graham, T.R, Li, H.
登録日2020-12-07
公開日2021-01-06
実験手法ELECTRON MICROSCOPY (3.85 Å)
主引用文献Transport mechanism of P4 ATPase phosphatidylcholine flippases.
Elife, 9, 2020
4NWT
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BU of 4nwt by Molmil
Crystal structure of the anti-human NGF Fab APE1531
分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, ACETATE ION, APE1531 Ab Fab heavy chain, ...
著者Verdino, P, Stanfield, R.L, Wilson, I.A.
登録日2013-12-06
公開日2014-10-22
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Nucleotide insertions and deletions complement point mutations to massively expand the diversity created by somatic hypermutation of antibodies.
J.Biol.Chem., 289, 2014
5N8Y
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BU of 5n8y by Molmil
KaiCBA circadian clock backbone model based on a Cryo-EM density
分子名称: Circadian clock protein KaiA, Circadian clock protein KaiB, Circadian clock protein kinase KaiC
著者Schuller, J.M, Snijder, J, Loessl, P, Heck, A.J.R, Foerster, F.
登録日2017-02-24
公開日2017-03-29
最終更新日2024-05-15
実験手法ELECTRON MICROSCOPY (4.7 Å)
主引用文献Structures of the cyanobacterial circadian oscillator frozen in a fully assembled state.
Science, 355, 2017
5E5M
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BU of 5e5m by Molmil
Crystal structure of mouse CTLA-4 in complex with nanobody
分子名称: CTLA-4 nanobody, Cytotoxic T-lymphocyte protein 4, GLYCEROL
著者Fedorov, A.A, Fedorov, E.V, Samanta, D, Bonanno, J.B, Almo, S.C.
登録日2015-10-08
公開日2016-10-12
最終更新日2019-01-30
実験手法X-RAY DIFFRACTION (2.182 Å)
主引用文献Crystal structure of mouse CTLA-4 in complex with nanobody
To Be Published
4PUP
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BU of 4pup by Molmil
2.75 Angstrom resolution crystal structure of uncharacterized protein from Burkholderia cenocepacia J2315
分子名称: Uncharacterized protein
著者Halavaty, A.S, Filippova, E.V, Wawrzak, Z, Kiryukhina, O, Minasov, G, Jedrzejczak, R, Shuvalova, L, Joachimiak, A, Anderson, W.F, Midwest Center for Structural Genomics (MCSG)
登録日2014-03-13
公開日2014-04-16
最終更新日2017-11-22
実験手法X-RAY DIFFRACTION (2.75 Å)
主引用文献2.75 Angstrom resolution crystal structure of uncharacterized protein from Burkholderia cenocepacia J2315
To be Published
5UQ4
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Crystal structure of Heme-Degrading Protein Rv3592 from Mycobacterium tuberculosis - heme free with cleaved protein
分子名称: Monooxygenase
著者Chang, C, Chhor, G, Jedrzejczak, R, Anderson, W.F, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
登録日2017-02-06
公開日2017-02-15
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.201 Å)
主引用文献Crystal structure of Heme-Degrading Protein Rv3592 from Mycobacterium tuberculosis - heme free with cleaved protein.
To Be Published
6T5F
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Human 14-3-3 sigma fused to the StARD1 peptide including phosphoserine-195
分子名称: 14-3-3 protein sigma, StARD1 peptide
著者Sluchanko, N.N, Tugaeva, K.V, Titterington, J, Antson, A.A.
登録日2019-10-16
公開日2020-11-18
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.63 Å)
主引用文献Molecular basis for the recognition of steroidogenic acute regulatory protein by the 14-3-3 protein family.
Febs J., 287, 2020
8EQN
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BU of 8eqn by Molmil
BG505 UFO-E2p-L4P nanoparticle reconstructed by focused refinement with a mask around the nanoparticle core
分子名称: BG505 UFO-E2p-L4P
著者Antanasijevic, A, Zhang, Y.N, Zhu, J, Ward, A.B.
登録日2022-10-08
公開日2023-04-19
最終更新日2024-06-19
実験手法ELECTRON MICROSCOPY (3.7 Å)
主引用文献Single-component multilayered self-assembling protein nanoparticles presenting glycan-trimmed uncleaved prefusion optimized envelope trimmers as HIV-1 vaccine candidates.
Nat Commun, 14, 2023
5KR8
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(4~{S},6~{S})-4-[2,4-bis(fluoranyl)phenyl]-6-(3,5-dimethyl-1,2-oxazol-4-yl)-4-methyl-5,6-dihydro-1,3-thiazin-2-amine (compound 5) bound to BACE1
分子名称: (4~{S},6~{S})-4-[2,4-bis(fluoranyl)phenyl]-6-(3,5-dimethyl-1,2-oxazol-4-yl)-4-methyl-5,6-dihydro-1,3-thiazin-2-amine, Beta-secretase 1, IODIDE ION
著者Lewis, H.A, Wu, Y.J, Rajamani, R, Thompson, L.A.
登録日2016-07-07
公開日2016-09-07
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (2.118 Å)
主引用文献Discovery of S3-Truncated, C-6 Heteroaryl Substituted Aminothiazine beta-Site APP Cleaving Enzyme-1 (BACE1) Inhibitors.
J.Med.Chem., 59, 2016
8EUQ
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Crystal structure of HLA-DRA*01:01/HLA-DRB1*04:01 in complex with c44H10 Fab
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, HLA class II histocompatibility antigen, ...
著者Kassardjian, A, Julien, J.-P.
登録日2022-10-19
公開日2023-04-19
最終更新日2024-10-09
実験手法X-RAY DIFFRACTION (3.09 Å)
主引用文献Modular adjuvant-free pan-HLA-DR-immunotargeting subunit vaccine against SARS-CoV-2 elicits broad sarbecovirus-neutralizing antibody responses.
Cell Rep, 42, 2023
6N5E
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Broadly protective antibodies directed to a subdominant influenza hemagglutinin epitope
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, FL-1066 heavy chain, FL-1066 light chain, ...
著者Bajic, G, Schmidt, A.G.
登録日2018-11-21
公開日2019-06-05
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Influenza Antigen Engineering Focuses Immune Responses to a Subdominant but Broadly Protective Viral Epitope.
Cell Host Microbe, 25, 2019
5HA1
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Crystal structure of human cellular retinol binding protein 1 in complex with retinylamine
分子名称: (2~{E},4~{E},6~{E},8~{E})-3,7-dimethyl-9-(2,6,6-trimethylcyclohexen-1-yl)nona-2,4,6,8-tetraen-1-amine, Retinol-binding protein 1
著者Golczak, M, Arne, J.M, Silvaroli, J.A, Kiser, P.D, Banerjee, S.
登録日2015-12-29
公開日2016-03-02
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.35 Å)
主引用文献Ligand Binding Induces Conformational Changes in Human Cellular Retinol-binding Protein 1 (CRBP1) Revealed by Atomic Resolution Crystal Structures.
J.Biol.Chem., 291, 2016

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