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PDB: 89111 件

8RSB
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p97 (VCP) mutant - F539A ADP state
分子名称: ADENOSINE-5'-DIPHOSPHATE, Transitional endoplasmic reticulum ATPase
著者Arie, M, Matzov, D, Karmona, R, Szenkier, N, Stanhill, A, Navon, A.
登録日2024-01-24
公開日2024-05-29
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献p97 (VCP) mutant - F539A ADP state
To Be Published
4Z89
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SH3-II of Drosophila Rim-binding protein bound to a Cacophony derived peptide
分子名称: CALCIUM ION, RIM-binding protein, isoform F, ...
著者Driller, J.H, Holton, N, Siebert, M, Boehme, M.A, Wahl, M.C, Sigrist, S.J, Loll, B.
登録日2015-04-08
公開日2015-08-05
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.64 Å)
主引用文献A high affinity RIM-binding protein/Aplip1 interaction prevents the formation of ectopic axonal active zones.
Elife, 4, 2015
7MF3
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Structure of the autoinhibited state of smooth muscle myosin-2
分子名称: ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, Myosin light polypeptide 6, ...
著者Heissler, S.M, Arora, A.S, Billington, N, Sellers, J.R, Chinthalapudi, K.
登録日2021-04-08
公開日2022-01-05
最終更新日2024-05-29
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献Cryo-EM structure of the autoinhibited state of myosin-2.
Sci Adv, 7, 2021
8TUG
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Cryo-EM structure of CPD-stalled Pol II in complex with Rad26 (engaged state)
分子名称: DNA (NTS), DNA (TS), DNA repair and recombination protein RAD26, ...
著者Sarsam, R.D, Lahiri, I, Leschziner, A.E.
登録日2023-08-16
公開日2024-01-24
実験手法ELECTRON MICROSCOPY (3.5 Å)
主引用文献Elf1 promotes Rad26's interaction with lesion-arrested Pol II for transcription-coupled repair.
Proc.Natl.Acad.Sci.USA, 121, 2024
6FLY
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BU of 6fly by Molmil
Structure of AcmJRL, a mannose binding jacalin related lectin from Ananas comosus, in complex with mannose.
分子名称: Jacalin-like lectin, alpha-D-mannopyranose
著者Azarkan, M, Herman, R, El Mahyaoui, R, Sauvage, E, Vanden Broeck, A, Charlier, P.
登録日2018-01-29
公開日2018-08-15
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.749 Å)
主引用文献Biochemical and structural characterization of a mannose binding jacalin-related lectin with two-sugar binding sites from pineapple (Ananas comosus) stem.
Sci Rep, 8, 2018
4U0Z
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Eukaryotic Fic Domain containing protein with bound APCPP
分子名称: Adenosine monophosphate-protein transferase FICD, DIPHOSPHOMETHYLPHOSPHONIC ACID ADENOSYL ESTER, MAGNESIUM ION
著者Cole, A.R, Bunney, T.D, Katan, M.
登録日2014-07-14
公開日2014-12-10
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2.95 Å)
主引用文献Crystal structure of the human, FIC-domain containing protein HYPE and implications for its functions.
Structure, 22, 2014
7RWY
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Crystal structure of a Fe-bound RIDC1 variant in the presence of reductant
分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, FE (III) ION, HEME C, ...
著者Kakkis, A, Golub, E.
登録日2021-08-20
公開日2022-06-29
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Redox- and metal-directed structural diversification in designed metalloprotein assemblies.
Chem.Commun.(Camb.), 58, 2022
6YHJ
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Thrombin in complex with D-Phe-Pro-2-chlorothiophen derivative (16e)
分子名称: (2~{S})-1-[(2~{R})-2-azanyl-3-phenyl-propanoyl]-~{N}-[(5-chloranylthiophen-2-yl)methyl]pyrrolidine-2-carboxamide, 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Sandner, A, Heine, A, Klebe, G, Collins, C.
登録日2020-03-30
公開日2021-04-14
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.44 Å)
主引用文献Thrombin in complex with D-Phe-Pro-2-chlorothiophen derivative (16e)
To be published
4ZAA
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Structure of A. niger Fdc1 in complex with 4-vinyl guaiacol
分子名称: 1-deoxy-5-O-phosphono-1-(3,3,4,5-tetramethyl-9,11-dioxo-2,3,8,9,10,11-hexahydro-7H-quinolino[1,8-fg]pteridin-12-ium-7-y l)-D-ribitol, 1-deoxy-5-O-phosphono-1-[(10aR)-2,2,3,4-tetramethyl-8,10-dioxo-1,2,8,9,10,10a-hexahydro-6H-indeno[1,7-ef]pyrimido[4,5-b][1,4]diazepin-6-yl]-D-ribitol, 2-Methoxy-4-vinylphenol, ...
著者Payne, K.A.P, Leys, D.
登録日2015-04-13
公開日2015-06-17
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.242 Å)
主引用文献New cofactor supports alpha , beta-unsaturated acid decarboxylation via 1,3-dipolar cycloaddition.
Nature, 522, 2015
1AK9
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SUBTILISIN MUTANT 8321
分子名称: CALCIUM ION, ISOPROPYL ALCOHOL, SODIUM ION, ...
著者Whitlow, M, Howard, A.J, Wood, J.F.
登録日1997-05-30
公開日1997-11-12
最終更新日2021-11-03
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Large increases in general stability for subtilisin BPN' through incremental changes in the free energy of unfolding.
Biochemistry, 28, 1989
4ZNV
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Crystal Structure of the ER-alpha Ligand-binding Domain (Y537S) in complex with a 2-Methoxy-substituted OBHS derivative
分子名称: 2-methoxyphenyl (1S,2R,4S)-5,6-bis(4-hydroxyphenyl)-7-oxabicyclo[2.2.1]hept-5-ene-2-sulfonate, Estrogen receptor, Nuclear receptor-interacting peptide
著者Nwachukwu, J.C, Srinivasan, S, Zheng, Y, Wang, S, Min, J, Dong, C, Liao, Z, Cavett, V, Nowak, J, Houtman, R, Carlson, K.E, Josan, J.S, Elemento, O, Katzenellenbogen, J.A, Zhou, H.B, Nettles, K.W.
登録日2015-05-05
公開日2016-05-04
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.771 Å)
主引用文献Predictive features of ligand-specific signaling through the estrogen receptor.
Mol.Syst.Biol., 12, 2016
6FN8
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Domain II of the HUMAN COPPER CHAPERONE FOR SUPEROXIDE DISMUTASE at 1.55 A resolution
分子名称: Copper chaperone for superoxide dismutase, ZINC ION
著者Sala, F.A, Wright, G.S.A, Antonyuk, S.V, Garratt, R.C, Hasnain, S.S.
登録日2018-02-02
公開日2019-01-30
最終更新日2019-06-19
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献Molecular recognition and maturation of SOD1 by its evolutionarily destabilised cognate chaperone hCCS.
Plos Biol., 17, 2019
6YHQ
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Crystal Structure of Fab F5.18.6, anti-Plasmodium vivax AMA1
分子名称: Fab F5.18.6 anti-Plasmodium vivax AMA1, heavy chain, kappa light chain, ...
著者Bentley, G.A, Saul, F.A, Vulliez-le Normand, B.
登録日2020-03-30
公開日2021-04-14
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.89 Å)
主引用文献Crystal Structure of Fab F5.18.6, anti-Plasmodium vivax AMA1
To Be Published
6J7W
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Crystal Structure of Human BCMA in complex with UniAb(TM) VH
分子名称: Tumor necrosis factor receptor superfamily member 17, UniAb
著者Clarke, S.C, Ma, B, Trinklein, N.D, Schellenberger, U, Osborn, M, Ouisse, L, Boudreau, A, Davison, L, Harris, K.E, Ugamraj, H, Balasubramani, A, Dang, K, Jorgensen, B, Ogana, H, Pham, D, Pratap, P, Sankaran, P, Anegon, I, van Schooten, W, Bruggemann, M, Buelow, R, Force Aldred, S.
登録日2019-01-18
公開日2019-02-06
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Multispecific Antibody Development Platform Based on Human Heavy Chain Antibodies
Front Immunol, 9, 2018
8U6X
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ATP-dependent DNA ligase Lig E from Neisseria gonorrhoeae
分子名称: ADENOSINE MONOPHOSPHATE, DNA (5'-D(*AP*TP*TP*GP*CP*GP*AP*CP*CP*CP*CP*AP*CP*TP*AP*TP*CP*GP*GP*AP*A)-3'), DNA (5'-D(*TP*TP*CP*CP*GP*AP*TP*AP*GP*TP*GP*GP*GP*GP*TP*CP*GP*CP*AP*AP*T)-3'), ...
著者Williamson, A, Pan, J.
登録日2023-09-14
公開日2024-01-31
実験手法X-RAY DIFFRACTION (2.44 Å)
主引用文献A role for the ATP-dependent DNA ligase lig E of Neisseria gonorrhoeae in biofilm formation.
Bmc Microbiol., 24, 2024
8P97
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BtuB3G3 bound to cyanocobalamin with disordered EL8
分子名称: CYANOCOBALAMIN, Putative surface layer protein, TonB-dependent receptor
著者Silale, A, Abellon-Ruiz, J, van den Berg, B.
登録日2023-06-05
公開日2023-08-16
最終更新日2023-09-20
実験手法ELECTRON MICROSCOPY (2.75 Å)
主引用文献BtuB TonB-dependent transporters and BtuG surface lipoproteins form stable complexes for vitamin B 12 uptake in gut Bacteroides.
Nat Commun, 14, 2023
6FNW
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Structure of a volume-regulated anion channel of the LRRC8 family
分子名称: 1,2-ETHANEDIOL, Volume-regulated anion channel subunit LRRC8A
著者Deneka, D, Sawicka, M, Lam, A.K.M, Paulino, C, Dutzler, R.
登録日2018-02-05
公開日2018-05-16
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structure of a volume-regulated anion channel of the LRRC8 family.
Nature, 558, 2018
8FDG
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Cryo-EM structure of coagulation factor V short
分子名称: Coagulation factor V
著者Mohammed, B.M, Pelc, L.A, Rau, M.J, Di Cera, E.
登録日2022-12-03
公開日2023-03-15
最終更新日2023-07-12
実験手法ELECTRON MICROSCOPY (3.2 Å)
主引用文献Cryo-EM structure of coagulation factor V short.
Blood, 141, 2023
8RND
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Cathepsin S in complex with NNPI-C10 inhibitor
分子名称: 1,2-ETHANEDIOL, Cathepsin S, DI(HYDROXYETHYL)ETHER, ...
著者Petruzzella, A, Lau, K, Pojer, F, Oricchio, E.
登録日2024-01-09
公開日2024-06-05
最終更新日2024-09-11
実験手法X-RAY DIFFRACTION (1.56 Å)
主引用文献Antibody-peptide conjugates deliver covalent inhibitors blocking oncogenic cathepsins.
Nat.Chem.Biol., 20, 2024
7BTX
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The mitochondrial SAM-Mdm10 supercomplex in GDN micelle from S.cere
分子名称: MDM10 isoform 1, Mitochondrial outer membrane beta-barrel protein, Sorting assembly machinery 35 kDa subunit, ...
著者Takeda, H, Tsutsumi, A, Nishizawa, T, Nureki, O, Kikkawa, M, Endo, T.
登録日2020-04-03
公開日2021-01-20
最終更新日2024-03-27
実験手法ELECTRON MICROSCOPY (2.8 Å)
主引用文献Mitochondrial sorting and assembly machinery operates by beta-barrel switching.
Nature, 590, 2021
6G2J
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Mouse mitochondrial complex I in the active state
分子名称: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOETHANOLAMINE, ADENOSINE-5'-DIPHOSPHATE, ...
著者Agip, A.N.A, Blaza, J.N, Bridges, H.R, Viscomi, C, Rawson, S, Muench, S.P, Hirst, J.
登録日2018-03-23
公開日2018-06-06
最終更新日2021-06-02
実験手法ELECTRON MICROSCOPY (3.3 Å)
主引用文献Cryo-EM structures of complex I from mouse heart mitochondria in two biochemically defined states.
Nat. Struct. Mol. Biol., 25, 2018
5YVR
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Crystal Structure of the H277A mutant of ADH/D1, an archaeal halo-thermophilic Red Sea brine pool alcohol dehydrogenase
分子名称: MANGANESE (II) ION, NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, alcohol dehydrogenase
著者Groetzinger, S.W, Strillinger, E, Frank, A, Eppinger, J, Groll, M, Arold, S.T.
登録日2017-11-27
公開日2017-12-27
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.896 Å)
主引用文献Identification and Experimental Characterization of an Extremophilic Brine Pool Alcohol Dehydrogenase from Single Amplified Genomes
ACS Chem. Biol., 13, 2018
6FQB
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MurT/GatD peptidoglycan amidotransferase complex from Streptococcus pneumoniae R6
分子名称: Cobyric acid synthase, GLUTAMINE, Mur ligase family protein
著者Morlot, C, Contreras-Martel, C, Leisico, F, Straume, D, Peters, K, Hegnar, O.A, Simon, N, Villard, A.M, Breukink, E, Gravier-Pelletier, C, Le Corre, L, Vollmer, W, Pietrancosta, N, Havarstein, L.S, Zapun, A.
登録日2018-02-13
公開日2018-08-22
最終更新日2018-11-07
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Structure of the essential peptidoglycan amidotransferase MurT/GatD complex from Streptococcus pneumoniae.
Nat Commun, 9, 2018
8TYO
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Structural and biochemical rationale for Beta variant protein booster vaccine broad cross-neutralization of SARS-CoV-2
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein
著者Bruch, E.M, Rak, A.
登録日2023-08-25
公開日2024-02-07
実験手法ELECTRON MICROSCOPY (2.75 Å)
主引用文献Structural and biochemical rationale for Beta variant protein booster vaccine broad cross-neutralization of SARS-CoV-2.
Sci Rep, 14, 2024
5HYP
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Structure of human C4b-binding protein alpha cain CCP domains 1 and 2 in complex with the hypervariable region of group A Streptococcus M28 protein
分子名称: C4b-binding protein alpha chain, M28 protein
著者Buffalo, C.Z, Bahn-Suh, A.J, Ghosh, P.
登録日2016-02-01
公開日2016-07-20
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (3.024 Å)
主引用文献Conserved patterns hidden within group A Streptococcus M protein hypervariability recognize human C4b-binding protein.
Nat Microbiol, 1, 2016

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件を2024-09-11に公開中

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