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2FAQ
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BU of 2faq by Molmil
Crystal Structure of Pseudomonas aeruginosa LigD polymerase domain with ATP and Manganese
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, MANGANESE (II) ION, SULFATE ION, ...
Authors:Zhu, H, Nandakumar, J, Aniukwu, J, Wang, L.K, Glickman, M.S, Lima, C.D, Shuman, S.
Deposit date:2005-12-07
Release date:2006-05-23
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Atomic structure and nonhomologous end-joining function of the polymerase component of bacterial DNA ligase D
Proc.Natl.Acad.Sci.USA, 103, 2006
2FAO
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BU of 2fao by Molmil
Crystal Structure of Pseudomonas aeruginosa LigD polymerase domain
Descriptor: SULFATE ION, probable ATP-dependent DNA ligase
Authors:Zhu, H, Nandakumar, J, Aniukwu, J, Wang, L.K, Glickman, M.S, Lima, C.D, Shuman, S.
Deposit date:2005-12-07
Release date:2006-05-23
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Atomic structure and nonhomologous end-joining function of the polymerase component of bacterial DNA ligase D
Proc.Natl.Acad.Sci.USA, 103, 2006
2FAR
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BU of 2far by Molmil
Crystal Structure of Pseudomonas aeruginosa LigD polymerase domain with dATP and Manganese
Descriptor: 2'-DEOXYADENOSINE 5'-TRIPHOSPHATE, MANGANESE (II) ION, SULFATE ION, ...
Authors:Zhu, H, Nandakumar, J, Aniukwu, J, Wang, L.K, Glickman, M.S, Lima, C.D, Shuman, S.
Deposit date:2005-12-07
Release date:2006-05-23
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Atomic structure and nonhomologous end-joining function of the polymerase component of bacterial DNA ligase D
Proc.Natl.Acad.Sci.USA, 103, 2006
2IA5
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BU of 2ia5 by Molmil
T4 polynucleotide kinase/phosphatase with bound sulfate and magnesium.
Descriptor: ARSENIC, MAGNESIUM ION, Polynucleotide kinase, ...
Authors:Zhu, H, Smith, P.C, Wang, L.K, Lima, C.D, Shuman, S.
Deposit date:2006-09-07
Release date:2007-06-05
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Structure-function analysis of the 3' phosphatase component of T4 polynucleotide kinase/phosphatase.
Virology, 366, 2007
4XH7
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BU of 4xh7 by Molmil
Crystal structure of MUPP1 PDZ4
Descriptor: IMIDAZOLE, Multiple PDZ domain protein
Authors:Liu, Z, Zhu, H, Liu, W.
Deposit date:2015-01-05
Release date:2015-03-04
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Biochemical and structural characterization of MUPP1-PDZ4 domain from Mus musculus.
Acta Biochim.Biophys.Sin., 47, 2015
8SMC
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BU of 8smc by Molmil
Cryo-EM structure of LRRK2 bound with type-I inhibitor DNL201
Descriptor: 2-methyl-2-(3-methyl-4-{[4-(methylamino)-5-(trifluoromethyl)pyrimidin-2-yl]amino}-1H-pyrazol-1-yl)propanenitrile, GUANOSINE-5'-DIPHOSPHATE, non-specific serine/threonine protein kinase
Authors:Sun, J, Zhu, H.
Deposit date:2023-04-26
Release date:2024-01-03
Method:ELECTRON MICROSCOPY (4.02 Å)
Cite:Rab29-dependent asymmetrical activation of leucine-rich repeat kinase 2.
Science, 382, 2023
5WDH
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BU of 5wdh by Molmil
Motor domain of human kinesin family member C1
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Kinesin-like protein KIFC1, MAGNESIUM ION, ...
Authors:Zhu, H, Tempel, W, He, H, Shen, Y, Wang, J, Brothers, G, Landry, R, Arrowsmith, C.H, Edwards, A.M, Park, H, Structural Genomics Consortium (SGC)
Deposit date:2017-07-05
Release date:2017-08-09
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.248 Å)
Cite:Structural basis of small molecule ATPase inhibition of a human mitotic kinesin motor protein.
Sci Rep, 7, 2017
5FZS
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BU of 5fzs by Molmil
Designed TPR Protein M4N delta C (CF II)
Descriptor: DESIGNED TPR PROTEIN
Authors:Albrecht, R, Zhu, H, Hartmann, M.D.
Deposit date:2016-03-15
Release date:2016-10-12
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.652 Å)
Cite:Origin of a folded repeat protein from an intrinsically disordered ancestor.
Elife, 5, 2016
5HSI
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BU of 5hsi by Molmil
Crystal structure of tyrosine decarboxylase at 1.73 Angstroms resolution
Descriptor: MAGNESIUM ION, Putative decarboxylase
Authors:Ni, Y, Zhou, J, Zhu, H, Zhang, K.
Deposit date:2016-01-25
Release date:2016-09-21
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.732 Å)
Cite:Crystal structure of tyrosine decarboxylase and identification of key residues involved in conformational swing and substrate binding
Sci Rep, 6, 2016
5FZQ
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BU of 5fzq by Molmil
Designed TPR Protein M4N
Descriptor: DESIGNED TPR PROTEIN, SULFATE ION
Authors:Albrecht, R, Zhu, H, Hartmann, M.D.
Deposit date:2016-03-15
Release date:2016-10-12
Last modified:2017-03-15
Method:X-RAY DIFFRACTION (2.148 Å)
Cite:Origin of a folded repeat protein from an intrinsically disordered ancestor.
Elife, 5, 2016
5FZR
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BU of 5fzr by Molmil
Designed TPR Protein M4N delta C (CF I)
Descriptor: DESIGNED TPR PROTEIN
Authors:Albrecht, R, Zhu, H, Hartmann, M.D.
Deposit date:2016-03-15
Release date:2016-10-12
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.045 Å)
Cite:Origin of a folded repeat protein from an intrinsically disordered ancestor.
Elife, 5, 2016
6DCG
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BU of 6dcg by Molmil
Discovery of MK-8353: An Orally Bioavailable Dual Mechanism ERK Inhibitor for Oncology
Descriptor: (3S)-3-(methylsulfanyl)-1-(2-{4-[4-(1-methyl-1H-1,2,4-triazol-3-yl)phenyl]-3,6-dihydropyridin-1(2H)-yl}-2-oxoethyl)-N-(3-{6-[(propan-2-yl)oxy]pyridin-3-yl}-1H-indazol-5-yl)pyrrolidine-3-carboxamide, Mitogen-activated protein kinase 1, SULFATE ION
Authors:Boga, S.B, Deng, Y, Zhu, L, Nan, Y, Cooper, A, Shipps Jr, G.W, Doll, R, Shih, N, Zhu, H, Sun, R, Wang, T, Paliwal, S, Tsui, H, Gao, X, Yao, X, Desai, J, Wang, J, Alhassan, A.B, Kelly, J, Patel, M, Muppalla, K, Gudipati, S, Zhang, L, Buevich, A, Hesk, D, Carr, D, Dayananth, P, Mei, H, Cox, K, Sherborne, B, Hruza, A.W, Xiao, L, Jin, W, Long, B, Liu, G, Taylor, S.A, Kirschmeier, P, Windsor, W.T, Bishop, R, Samatar, A.A.
Deposit date:2018-05-06
Release date:2018-08-08
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:MK-8353: Discovery of an Orally Bioavailable Dual Mechanism ERK Inhibitor for Oncology.
ACS Med Chem Lett, 9, 2018
6N5V
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BU of 6n5v by Molmil
Crystal Structure of Strictosidine in complex with 1H-indole-4-ethanamine
Descriptor: 2-(1H-indol-4-yl)ethan-1-amine, Strictosidine synthase
Authors:Cai, Y, Shao, N, Xie, H, Futamura, Y, Panjikar, S, Liu, H, Zhu, H, Osada, H, Zou, H.
Deposit date:2018-11-22
Release date:2019-11-27
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.549 Å)
Cite:Crystal Structure of Strictosidine in complex with 1H-indole-4-ethanamine
to be published
1XC1
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BU of 1xc1 by Molmil
Oxo Zirconium(IV) Cluster in the Ferric Binding Protein (FBP)
Descriptor: OXO ZIRCONIUM(IV) CLUSTER, periplasmic iron-binding protein
Authors:Zhong, W, Alexeev, D, Harvey, I, Guo, M, Hunter, D.J.B, Zhu, H, Campopiano, D.J, Sadler, P.J.
Deposit date:2004-08-31
Release date:2004-09-21
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.51 Å)
Cite:Assembly of an Oxo-Zirconium(IV) Cluster in a Protein Cleft
Angew.Chem.Int.Ed.Engl., 43, 2004
1CEH
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BU of 1ceh by Molmil
STRUCTURE AND FUNCTION OF THE CATALYTIC SITE MUTANT ASP99ASN OF PHOSPHOLIPASE A2: ABSENCE OF CONSERVED STRUCTURAL WATER
Descriptor: CALCIUM ION, PHOSPHOLIPASE A2
Authors:Kumar, A, Sekharudu, C, Ramakrishnan, B, Dupureur, C.M, Zhu, H, Tsai, M.-D, Sundaralingam, M.
Deposit date:1994-11-16
Release date:1995-02-07
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structure and function of the catalytic site mutant Asp 99 Asn of phospholipase A2: absence of the conserved structural water.
Protein Sci., 3, 1994
1EJ8
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BU of 1ej8 by Molmil
CRYSTAL STRUCTURE OF DOMAIN 2 OF THE YEAST COPPER CHAPERONE FOR SUPEROXIDE DISMUTASE (LYS7) AT 1.55 A RESOLUTION
Descriptor: CALCIUM ION, LYS7
Authors:Hall, L.T, Sanchez, R.J, Holloway, S.P, Zhu, H, Stine, J.E, Lyons, T.J, Demeler, B, Schirf, V, Hansen, J.C, Nersissian, A.M, Valentine, J.S, Hart, P.J.
Deposit date:2000-03-01
Release date:2000-04-05
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:X-ray crystallographic and analytical ultracentrifugation analyses of truncated and full-length yeast copper chaperones for SOD (LYS7): a dimer-dimer model of LYS7-SOD association and copper delivery.
Biochemistry, 39, 2000
6QF8
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BU of 6qf8 by Molmil
Solution NMR ensemble for human ubiquitin at 298K compiled using the CoMAND method
Descriptor: Polyubiquitin-B
Authors:ElGamacy, M, Truffault, V, Zhu, H, Coles, M.
Deposit date:2019-01-09
Release date:2019-04-10
Last modified:2019-05-15
Method:SOLUTION NMR
Cite:Mapping Local Conformational Landscapes of Proteins in Solution.
Structure, 27, 2019
6QFP
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BU of 6qfp by Molmil
Solution NMR ensemble for MlbQ at 298K compiled using the CoMAND method
Descriptor: Putative lipoprotein
Authors:ElGamacy, M, Truffault, V, Zhu, H, Coles, M.
Deposit date:2019-01-10
Release date:2019-04-10
Last modified:2019-05-15
Method:SOLUTION NMR
Cite:Mapping Local Conformational Landscapes of Proteins in Solution.
Structure, 27, 2019
6QH2
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BU of 6qh2 by Molmil
Solution NMR ensemble for a chimeric KH-S1 domain construct of exosomal polynucleotide phosphrylase at 298K compiled using the CoMAND method
Descriptor: Polyribonucleotide nucleotidyltransferase
Authors:ElGamacy, M, Truffault, V, Zhu, H, Coles, M.
Deposit date:2019-01-14
Release date:2019-04-10
Last modified:2019-05-15
Method:SOLUTION NMR
Cite:Mapping Local Conformational Landscapes of Proteins in Solution.
Structure, 27, 2019
6NJE
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BU of 6nje by Molmil
Crystal structure of the motor domain of human kinesin family member 22
Descriptor: ADENOSINE-5'-DIPHOSPHATE, CHLORIDE ION, Kinesin-like protein KIF22, ...
Authors:Walker, B.C, Zhu, H, Tempel, W, Arrowsmith, C.H, Edwards, A.M, Park, H, Cochran, J.C, Structural Genomics Consortium (SGC)
Deposit date:2019-01-03
Release date:2019-01-16
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structure of the motor domain of human kinesin family member 22
To Be Published
3LF5
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BU of 3lf5 by Molmil
Structure of Human NADH cytochrome b5 oxidoreductase (Ncb5or) b5 Domain to 1.25A Resolution
Descriptor: Cytochrome b5 reductase 4, PROTOPORPHYRIN IX CONTAINING FE, SULFATE ION
Authors:Deng, B, Parthasarathy, S, Wang, W, Gibney, B.R, Battaile, K.P, Lovell, S, Benson, D.R, Zhu, H.
Deposit date:2010-01-15
Release date:2010-07-14
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.25 Å)
Cite:Study of the individual cytochrome b5 and cytochrome b5 reductase domains of Ncb5or reveals a unique heme pocket and a possible role of the CS domain.
J.Biol.Chem., 285, 2010
8EF9
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BU of 8ef9 by Molmil
Structure of Lates calcarifer DNA polymerase theta polymerase domain with long duplex DNA, complex Ia
Descriptor: 2'-DEOXYGUANOSINE-5'-TRIPHOSPHATE, DNA (5'-D(*AP*GP*CP*AP*TP*CP*CP*GP*TP*AP*GP*(2DA))-3'), DNA (5'-D(*AP*GP*CP*TP*CP*TP*AP*CP*GP*GP*AP*TP*GP*C)-3'), ...
Authors:Li, C, Zhu, H, Sun, J, Gao, Y.
Deposit date:2022-09-08
Release date:2022-12-14
Last modified:2023-02-01
Method:ELECTRON MICROSCOPY (2.4 Å)
Cite:Structural basis of DNA polymerase theta mediated DNA end joining.
Nucleic Acids Res., 51, 2023
8EFC
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BU of 8efc by Molmil
Structure of Lates calcarifer DNA polymerase theta polymerase domain with long duplex DNA, complex Ia
Descriptor: 2'-DEOXYGUANOSINE-5'-TRIPHOSPHATE, DNA (5'-D(*AP*CP*TP*GP*TP*GP*AP*GP*GP*CP*AP*TP*CP*CP*GP*TP*AP*GP*(2DA))-3'), DNA (5'-D(*AP*GP*CP*TP*CP*TP*AP*CP*GP*GP*AP*TP*GP*CP*CP*TP*CP*AP*CP*AP*G)-3'), ...
Authors:Li, C, Zhu, H, Sun, J, Gao, Y.
Deposit date:2022-09-08
Release date:2022-12-14
Last modified:2023-02-01
Method:ELECTRON MICROSCOPY (2.8 Å)
Cite:Structural basis of DNA polymerase theta mediated DNA end joining.
Nucleic Acids Res., 51, 2023
8EFK
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BU of 8efk by Molmil
Structure of Lates calcarifer DNA polymerase theta polymerase domain with hairpin DNA
Descriptor: 2',3'-dideoxyadenosine triphosphate, DNA (5'-D(P*TP*TP*TP*TP*GP*GP*CP*TP*TP*TP*TP*GP*CP*CP*(2DA))-3'), Lates calcarifer DNA polymerase theta, ...
Authors:Li, C, Zhu, H, Sun, J, Gao, Y.
Deposit date:2022-09-08
Release date:2022-12-14
Last modified:2023-02-01
Method:ELECTRON MICROSCOPY (3 Å)
Cite:Structural basis of DNA polymerase theta mediated DNA end joining.
Nucleic Acids Res., 51, 2023
3CEY
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BU of 3cey by Molmil
Crystal structure of L3MBTL2
Descriptor: Lethal(3)malignant brain tumor-like 2 protein
Authors:Nady, N, Guo, Y, Pan, P, Allali-Hassani, A, Qi, C, Zhu, H, Dong, A, Mackenzie, F, Crombet, L, Loppnau, P, Kozieradzki, I, Vedadi, M, Edwards, A.M, Weigelt, J, Bountra, C, Arrowsmith, C.H, Bochkarev, A, Read, R, Min, J, Structural Genomics Consortium (SGC)
Deposit date:2008-02-29
Release date:2008-05-06
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Methylation-state-specific recognition of histones by the MBT repeat protein L3MBTL2.
Nucleic Acids Res., 37, 2009

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