Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
5D7D
DownloadVisualize
BU of 5d7d by Molmil
Crystal structure of the ATP binding domain of S. aureus GyrB complexed with a ligand
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, 7-propyl-3-[2-(pyridin-3-yl)-1,3-thiazol-5-yl]-1,7-dihydro-6H-pyrazolo[3,4-b]pyridin-6-one, CHLORIDE ION, ...
Authors:Zhang, J, Yang, Q, Cross, J.B, Romero, J.A.C, Ryan, M.D, Lippa, B, Dolle, R.E, Andersen, O.A, Barker, J, Cheng, R.K, Kahmann, J, Felicetti, B, Wood, M, Scheich, C.
Deposit date:2015-08-13
Release date:2015-11-11
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Discovery of Indazole Derivatives as a Novel Class of Bacterial Gyrase B Inhibitors.
Acs Med.Chem.Lett., 6, 2015
5D7R
DownloadVisualize
BU of 5d7r by Molmil
Crystal structure of the ATP binding domain of S. aureus GyrB complexed with a ligand
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, 3-hydroxy-5-[5-(6-hydroxy-7-propyl-2H-indazol-3-yl)-1,3-thiazol-2-yl]pyridine-2-carboxylic acid, CHLORIDE ION, ...
Authors:Zhang, J, Yang, Q, Cross, J.B, Romero, J.A.C, Ryan, M.D, Lippa, B, Dolle, R.E, Andersen, O.A, Barker, J, Cheng, R.K, Kahmann, J, Felicetti, B, Wood, M, Scheich, C.
Deposit date:2015-08-14
Release date:2015-11-18
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Discovery of Indazole Derivatives as a Novel Class of Bacterial Gyrase B Inhibitors.
Acs Med.Chem.Lett., 6, 2015
5JRC
DownloadVisualize
BU of 5jrc by Molmil
Crystal structure of NeC3PO in complex with ssRNA.
Descriptor: CALCIUM ION, NEQ131, ssRNA
Authors:Zhang, J, Gan, J.
Deposit date:2016-05-06
Release date:2016-09-28
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural basis for single-stranded RNA recognition and cleavage by C3PO
Nucleic Acids Res., 44, 2016
5JR9
DownloadVisualize
BU of 5jr9 by Molmil
Crystal structure of apo-NeC3PO
Descriptor: NEQ131
Authors:Zhang, J, Gan, J.
Deposit date:2016-05-06
Release date:2016-09-28
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structural basis for single-stranded RNA recognition and cleavage by C3PO
Nucleic Acids Res., 44, 2016
7M5D
DownloadVisualize
BU of 7m5d by Molmil
Cryo-EM structure of a non-rotated E.coli 70S ribosome in complex with RF3-GTP, RF1 and P-tRNA (state I)
Descriptor: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ...
Authors:Zhang, J.
Deposit date:2021-03-23
Release date:2022-10-19
Method:ELECTRON MICROSCOPY (2.8 Å)
Cite:Cryo-EM structure of a non-rotated E.coli 70S ribosome in complex with RF3-GTP, RF1 and P-tRNA (state I)
To Be Published
3J03
DownloadVisualize
BU of 3j03 by Molmil
Lidless Mm-cpn in the closed state with ATP/AlFx
Descriptor: Lidless Mm-cpn
Authors:Zhang, J, Ma, B, DiMaio, F, Douglas, N.R, Joachimiak, L, Baker, D, Frydman, J, Levitt, M, Chiu, W.
Deposit date:2011-02-10
Release date:2011-05-18
Last modified:2024-02-21
Method:ELECTRON MICROSCOPY (4.8 Å)
Cite:Cryo-EM structure of a group II chaperonin in the prehydrolysis ATP-bound state leading to lid closure.
Structure, 19, 2011
8TDJ
DownloadVisualize
BU of 8tdj by Molmil
Cryo-EM structure of the wild-type AtMSL10 in GDN
Descriptor: Mechanosensitive ion channel protein 10
Authors:Zhang, J, Yuan, P.
Deposit date:2023-07-03
Release date:2023-10-18
Method:ELECTRON MICROSCOPY (3.7 Å)
Cite:Open structure and gating of the Arabidopsis mechanosensitive ion channel MSL10.
Nat Commun, 14, 2023
8TDK
DownloadVisualize
BU of 8tdk by Molmil
Cryo-EM structure of AtMSL10-G556V
Descriptor: Mechanosensitive ion channel protein 10
Authors:Zhang, J, Yuan, P.
Deposit date:2023-07-03
Release date:2023-10-18
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Open structure and gating of the Arabidopsis mechanosensitive ion channel MSL10.
Nat Commun, 14, 2023
8TDM
DownloadVisualize
BU of 8tdm by Molmil
Cryo-EM structure of AtMSL10-K539E
Descriptor: Mechanosensitive ion channel protein 10
Authors:Zhang, J, Yuan, P.
Deposit date:2023-07-03
Release date:2023-10-18
Method:ELECTRON MICROSCOPY (3.7 Å)
Cite:Open structure and gating of the Arabidopsis mechanosensitive ion channel MSL10.
Nat Commun, 14, 2023
8TDL
DownloadVisualize
BU of 8tdl by Molmil
Cryo-EM structure of the wild-type AtMSL10 in saposin
Descriptor: Mechanosensitive ion channel protein 10
Authors:Zhang, J, Yuan, P.
Deposit date:2023-07-03
Release date:2023-10-18
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:Open structure and gating of the Arabidopsis mechanosensitive ion channel MSL10.
Nat Commun, 14, 2023
2M8V
DownloadVisualize
BU of 2m8v by Molmil
Solution Structure and Activity Study of Bovicin HJ50, a Particular Type AII Lantibiotic
Descriptor: BovA
Authors:Zhang, J, Feng, Y, Wang, J, Zhong, J.
Deposit date:2013-05-29
Release date:2014-05-21
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Type AII lantibiotic bovicin HJ50 with a rare disulfide bond: structure, structure-activity relationships and mode of action.
Biochem.J., 461, 2014
7V5H
DownloadVisualize
BU of 7v5h by Molmil
VcOrn native structure with N terminal tag
Descriptor: Oligoribonuclease
Authors:Zhang, J, Zhang, Q, Bartlam, M.
Deposit date:2021-08-17
Release date:2021-12-15
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystal structure of oligoribonuclease from Vibrio cholerae O1 El Tor with bound peptide.
Acta Crystallogr.,Sect.F, 77, 2021
7VA6
DownloadVisualize
BU of 7va6 by Molmil
PaOrn Oligoribonuclease D11A mutant with RNA GU complex structure
Descriptor: IMIDAZOLE, Oligoribonuclease, RNA (5'-R(P*GP*U)-3')
Authors:Zhang, J, Zhang, Q, Bartlam, M.
Deposit date:2021-08-27
Release date:2022-09-07
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:PaOrn Oligoribonuclease D11A mutant with RNA GU complex structure
To Be Published
7VA2
DownloadVisualize
BU of 7va2 by Molmil
PaOrn Oligoribonuclease D11A mutant with product GMP complex structure
Descriptor: GUANOSINE-5'-MONOPHOSPHATE, IMIDAZOLE, Oligoribonuclease, ...
Authors:Zhang, J, Zhang, Q, Bartlam, M.
Deposit date:2021-08-27
Release date:2022-09-07
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:PaOrn Oligoribonuclease D11A mutant with product GMP complex structure
To Be Published
7V9Z
DownloadVisualize
BU of 7v9z by Molmil
PaOrn Oligoribonuclease native structure
Descriptor: IMIDAZOLE, Oligoribonuclease, SULFATE ION
Authors:Zhang, J, Zhang, Q, Bartlam, M.
Deposit date:2021-08-27
Release date:2022-09-07
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:PaOrn Oligoribonuclease native structure
To Be Published
7VA3
DownloadVisualize
BU of 7va3 by Molmil
PaOrn Oligoribonuclease D11A mutant with substrate pGpG complex structure
Descriptor: IMIDAZOLE, MANGANESE (II) ION, Oligoribonuclease, ...
Authors:Zhang, J, Zhang, Q, Bartlam, M.
Deposit date:2021-08-27
Release date:2022-09-07
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:PaOrn Oligoribonuclease D11A mutant with substrate pGpG complex structure
To Be Published
4PY0
DownloadVisualize
BU of 4py0 by Molmil
Crystal structure of P2Y12 receptor in complex with 2MeSATP
Descriptor: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, 2-(methylsulfanyl)adenosine 5'-(tetrahydrogen triphosphate), P2Y purinoceptor 12, ...
Authors:Zhang, J, Zhang, K, Gao, Z.G, Paoletta, S, Zhang, D, Han, G.W, Li, T, Ma, L, Zhang, W, Muller, C.E, Yang, H, Jiang, H, Cherezov, V, Katritch, V, Jacobson, K.A, Stevens, R.C, Wu, B, Zhao, Q, GPCR Network (GPCR)
Deposit date:2014-03-25
Release date:2014-04-30
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Agonist-bound structure of the human P2Y12 receptor
Nature, 509, 2014
8GSJ
DownloadVisualize
BU of 8gsj by Molmil
APC-Asef tripeptide inhibitor
Descriptor: (1R,2S)-2-phenylcyclopropanamine, 2-methylsulfanylpyrimidine-4-carbaldehyde, Adenomatous polyposis coli protein, ...
Authors:Zhang, J, Wang, X.F, Song, K.
Deposit date:2022-09-06
Release date:2023-12-27
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:APC-Asef tripeptide inhibitor
To Be Published
4TZX
DownloadVisualize
BU of 4tzx by Molmil
Vibrio Vulnificus Adenine Riboswitch variant, grown in Mg2+
Descriptor: ADENINE, MAGNESIUM ION, Vibrio vulnificus Adenine Riboswitch
Authors:Zhang, J, Ferre-D'Amare, A.R.
Deposit date:2014-07-11
Release date:2014-09-10
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.01 Å)
Cite:Dramatic Improvement of Crystals of Large RNAs by Cation Replacement and Dehydration.
Structure, 22, 2014
4TZZ
DownloadVisualize
BU of 4tzz by Molmil
Co-crystals of the Ternary Complex Containing a T-box Stem I RNA, its Cognate tRNAGly, and B. subtilis YbxF protein, treated by removing lithium sulfate and increasing PEG3350 concentration from 20% to 45% post crystallization
Descriptor: MAGNESIUM ION, Ribosome-associated protein L7Ae-like, T-box Stem I RNA, ...
Authors:Zhang, J, Ferre-D'Amare, A.R.
Deposit date:2014-07-11
Release date:2014-09-10
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (3.64 Å)
Cite:Dramatic Improvement of Crystals of Large RNAs by Cation Replacement and Dehydration.
Structure, 22, 2014
4TV0
DownloadVisualize
BU of 4tv0 by Molmil
Drosophila stem-loop binding protein complexed with histone mRNA stem-loop, Selenomethionine derivative
Descriptor: CALCIUM ION, Histone RNA hairpin-binding protein, RNA (26-MER)
Authors:Zhang, J.
Deposit date:2014-06-25
Release date:2014-09-17
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.601 Å)
Cite:Molecular mechanisms for the regulation of histone mRNA stem-loop-binding protein by phosphorylation.
Proc.Natl.Acad.Sci.USA, 111, 2014
4TUW
DownloadVisualize
BU of 4tuw by Molmil
drosophila stem-loop binding protein complexed with histone mRNA stem-loop, phospho mimic of TPNK and C-terminal region
Descriptor: CALCIUM ION, HISTONE MRNA 3' STEM LOOP, Histone RNA hairpin-binding protein
Authors:Zhang, J.
Deposit date:2014-06-25
Release date:2014-07-23
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.902 Å)
Cite:Molecular mechanisms for the regulation of histone mRNA stem-loop-binding protein by phosphorylation.
Proc.Natl.Acad.Sci.USA, 111, 2014
4TUX
DownloadVisualize
BU of 4tux by Molmil
drosophila stem-loop binding protein complexed with histone mRNA stem-loop
Descriptor: CALCIUM ION, Histone RNA hairpin-binding protein, RNA (26-MER)
Authors:Zhang, J.
Deposit date:2014-06-25
Release date:2014-07-16
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (3.08 Å)
Cite:Molecular mechanisms for the regulation of histone mRNA stem-loop-binding protein by phosphorylation.
Proc.Natl.Acad.Sci.USA, 111, 2014
4TZY
DownloadVisualize
BU of 4tzy by Molmil
Vibrio vulnificus Adenine Riboswitch Variant, grown in both Sr2+ and Mg2+
Descriptor: ADENINE, MAGNESIUM ION, STRONTIUM ION, ...
Authors:Zhang, J, Ferre-D'Amare, A.R.
Deposit date:2014-07-11
Release date:2014-09-10
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.57 Å)
Cite:Dramatic Improvement of Crystals of Large RNAs by Cation Replacement and Dehydration.
Structure, 22, 2014
1F20
DownloadVisualize
BU of 1f20 by Molmil
CRYSTAL STRUCTURE OF RAT NEURONAL NITRIC-OXIDE SYNTHASE FAD/NADP+ DOMAIN AT 1.9A RESOLUTION.
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, FORMIC ACID, GLYCEROL, ...
Authors:Zhang, J, Martasek, P, Masters, B.S, Kim, J.P.
Deposit date:2000-05-22
Release date:2001-10-10
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structure of the FAD/NADPH-binding domain of rat neuronal nitric-oxide synthase. Comparisons with NADPH-cytochrome P450 oxidoreductase.
J.Biol.Chem., 276, 2001

218853

PDB entries from 2024-04-24

PDB statisticsPDBj update infoContact PDBjnumon