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6A0R
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BU of 6a0r by Molmil
Homoserine dehydrogenase from Thermus thermophilus HB8 unliganded form
Descriptor: 3-CYCLOHEXYL-1-PROPYLSULFONIC ACID, FORMIC ACID, GLYCEROL, ...
Authors:Akai, S, Ikushiro, H, Sawai, T, Yano, T, Kamiya, N, Miyahara, I.
Deposit date:2018-06-06
Release date:2018-11-28
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.83 Å)
Cite:The crystal structure of homoserine dehydrogenase complexed with l-homoserine and NADPH in a closed form
J. Biochem., 165, 2019
6A0S
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BU of 6a0s by Molmil
Homoserine dehydrogenase from Thermus thermophilus HB8 complexed with HSE and NADPH
Descriptor: 3-CYCLOHEXYL-1-PROPYLSULFONIC ACID, FORMIC ACID, GLYCEROL, ...
Authors:Akai, S, Ikushiro, H, Sawai, T, Yano, T, Kamiya, N, Miyahara, I.
Deposit date:2018-06-06
Release date:2018-11-28
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2 Å)
Cite:The crystal structure of homoserine dehydrogenase complexed with l-homoserine and NADPH in a closed form
J. Biochem., 165, 2019
6A0U
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BU of 6a0u by Molmil
Homoserine dehydrogenase K195A mutant from Thermus thermophilus HB8 complexed with HSE and NADP+
Descriptor: 3-CYCLOHEXYL-1-PROPYLSULFONIC ACID, FORMIC ACID, GLYCEROL, ...
Authors:Akai, S, Ikushiro, H, Sawai, T, Yano, T, Kamiya, N, Miyahara, I.
Deposit date:2018-06-06
Release date:2018-11-28
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.93 Å)
Cite:The crystal structure of homoserine dehydrogenase complexed with l-homoserine and NADPH in a closed form
J. Biochem., 165, 2019
6A0T
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BU of 6a0t by Molmil
Homoserine dehydrogenase K99A mutant from Thermus thermophilus HB8 complexed with HSE and NADP+
Descriptor: 3-CYCLOHEXYL-1-PROPYLSULFONIC ACID, FORMIC ACID, GLYCEROL, ...
Authors:Akai, S, Ikushiro, H, Sawai, T, Yano, T, Kamiya, N, Miyahara, I.
Deposit date:2018-06-06
Release date:2018-11-28
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.87 Å)
Cite:The crystal structure of homoserine dehydrogenase complexed with l-homoserine and NADPH in a closed form
J. Biochem., 165, 2019
5Z41
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BU of 5z41 by Molmil
Aquifex aeolicus MutL endonuclease domain with a single zinc ion.
Descriptor: DI(HYDROXYETHYL)ETHER, DNA mismatch repair protein MutL, MAGNESIUM ION, ...
Authors:Fukui, K, Yano, T.
Deposit date:2018-01-10
Release date:2018-04-25
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Multiple zinc ions maintain the open conformation of the catalytic site in the DNA mismatch repair endonuclease MutL from Aquifex aeolicus
FEBS Lett., 592, 2018
5Z42
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BU of 5z42 by Molmil
Aquifex aeolicus MutL endonuclease domain with three zinc ions.
Descriptor: CHLORIDE ION, DI(HYDROXYETHYL)ETHER, DNA mismatch repair protein MutL, ...
Authors:Fukui, K, Yano, T.
Deposit date:2018-01-10
Release date:2018-04-25
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Multiple zinc ions maintain the open conformation of the catalytic site in the DNA mismatch repair endonuclease MutL from Aquifex aeolicus
FEBS Lett., 592, 2018
5YTQ
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BU of 5ytq by Molmil
Crystal Structure of TTHA0139 L34A with Lanthanum from Thermus thermophilus HB8
Descriptor: LANTHANUM (III) ION, TTHA0139
Authors:Takao, K, Inoue, M, Fukui, K, Yano, T, Masui, R.
Deposit date:2017-11-19
Release date:2018-11-21
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2.393 Å)
Cite:Crystal Structure of TTHA0139 L34A with Lanthanum from Thermus thermophilus HB8
To Be Published
5YTP
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BU of 5ytp by Molmil
Crystal Structure of TTHA0139 L34A from Thermus thermophilus HB8
Descriptor: TTHA0139
Authors:Takao, K, Inoue, M, Fukui, K, Yano, T, Masui, R.
Deposit date:2017-11-19
Release date:2018-11-21
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.457 Å)
Cite:Crystal Structure of TTHA0139 L34A from Thermus thermophilus HB8
To Be Published
8J6G
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BU of 8j6g by Molmil
Neutron structure of copper amine oxidase from Arthrobacter globiformis anaerobically reduced by phenylethylamine at pD 9.0
Descriptor: 2-PHENYLETHYLAMINE, COPPER (II) ION, Phenylethylamine oxidase, ...
Authors:Murakawa, T, Okajima, T.
Deposit date:2023-04-25
Release date:2023-09-20
Method:NEUTRON DIFFRACTION (1.09 Å), X-RAY DIFFRACTION
Cite:Neutron Crystallography of a Semiquinone Radical Intermediate of Copper Amine Oxidase Reveals a Substrate-Assisted Conformational Change of the Peptidyl Quinone Cofactor
Acs Catalysis, 2023
6L9C
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BU of 6l9c by Molmil
Neutron structure of copper amine oxidase from Arthrobacter glibiformis at pD 7.4
Descriptor: COPPER (II) ION, Phenylethylamine oxidase, SODIUM ION
Authors:Murakawa, T, Kurihara, K, Shoji, M, Shibazaki, C, Sunami, T, Tamada, T, Yano, N, Yamada, T, Kusaka, K, Suzuki, M, Shigeta, Y, Kuroki, R, Hayashi, H, Yano, Y, Tanizawa, K, Adachi, M, Okajima, T.
Deposit date:2019-11-08
Release date:2020-04-29
Last modified:2023-11-22
Method:NEUTRON DIFFRACTION (1.14 Å), X-RAY DIFFRACTION
Cite:Neutron crystallography of copper amine oxidase reveals keto/enolate interconversion of the quinone cofactor and unusual proton sharing.
Proc.Natl.Acad.Sci.USA, 117, 2020
7F8K
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BU of 7f8k by Molmil
Room temperature structure of bacterial copper amine oxidase determined by serial femtosecond crystallography
Descriptor: COPPER (II) ION, Phenylethylamine oxidase
Authors:Murakawa, T, Okajima, T.
Deposit date:2021-07-02
Release date:2021-09-08
Last modified:2021-10-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Microcrystal preparation for serial femtosecond X-ray crystallography of bacterial copper amine oxidase
Acta Crystallogr.,Sect.F, 77, 2021
7YNH
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BU of 7ynh by Molmil
Catalytic intermediate of copper amine oxidase determined by serial femtosecond X-ray crystallography using a single-flow liquid jet system
Descriptor: COPPER (II) ION, PHENYLACETALDEHYDE, Phenylethylamine oxidase, ...
Authors:Murakawa, T, Okajima, T.
Deposit date:2022-07-31
Release date:2022-11-16
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.94 Å)
Cite:Serial femtosecond X-ray crystallography of an anaerobically formed catalytic intermediate of copper amine oxidase.
Acta Crystallogr D Struct Biol, 78, 2022
7ED9
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BU of 7ed9 by Molmil
Crystal structure of selenomethionine-labeled Thermus thermophilus FakA ATP-binding domain
Descriptor: ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, Probable kinase
Authors:Nakatani, M, Nakahara, S, Fukui, K, Murakawa, T, Masui, R.
Deposit date:2021-03-15
Release date:2022-03-16
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.01764154 Å)
Cite:Crystal structure of a nucleotide-binding domain of fatty acid kinase FakA from Thermus thermophilus HB8.
J.Struct.Biol., 214, 2022
7ED6
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BU of 7ed6 by Molmil
Crystal structure of Thermus thermophilus FakA ATP-binding domain
Descriptor: ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, Probable kinase
Authors:Nakatani, M, Nakahara, S, Fukui, K, Murakawa, T, Masui, R.
Deposit date:2021-03-15
Release date:2022-03-16
Last modified:2023-01-11
Method:X-RAY DIFFRACTION (1.92850327 Å)
Cite:Crystal structure of a nucleotide-binding domain of fatty acid kinase FakA from Thermus thermophilus HB8.
J.Struct.Biol., 214, 2022
3W8R
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BU of 3w8r by Molmil
Mutant structure of Thermus thermophilus HB8 uridine-cytidine kinase
Descriptor: 4-AMINO-1-BETA-D-RIBOFURANOSYL-2(1H)-PYRIMIDINONE, PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER, Uridine kinase
Authors:Tomoike, F, Nakagawa, N, Masui, R, Kuramitsu, S.
Deposit date:2013-03-21
Release date:2014-03-26
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Indispensable residue for uridine binding in the uridine-cytidine kinase family.
Biochem Biophys Rep, 11, 2017
6FE4
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BU of 6fe4 by Molmil
Crystal structure of the complex between Shiga toxin Stx2 B subunit and neutralising Nb113
Descriptor: Nb113, Shiga-like toxin 2 subunit B
Authors:Bernedo, R, Muyldermans, S, Sterckx, Y.G.J.
Deposit date:2017-12-29
Release date:2018-03-07
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (3 Å)
Cite:Structural Basis for the Specific Neutralization of Stx2a with a Camelid Single Domain Antibody Fragment.
Toxins (Basel), 10, 2018
2CB3
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BU of 2cb3 by Molmil
Crystal structure of peptidoglycan recognition protein-LE in complex with tracheal cytotoxin (monomeric diaminopimelic acid-type peptidoglycan)
Descriptor: GLCNAC(BETA1-4)-MURNAC(1,6-ANHYDRO)-L-ALA-GAMMA-D-GLU-MESO-A2PM-D-ALA, GLYCEROL, PEPTIDOGLYCAN-RECOGNITION PROTEIN-LE
Authors:Lim, J.-H, Kim, M.-S, Oh, B.-H.
Deposit date:2005-12-29
Release date:2006-01-26
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structural Basis for Preferential Recognition of Diaminopimelic Acid-Type Peptidoglycan by a Subset of Peptidoglycan Recognition Proteins
J.Biol.Chem., 281, 2006
5X79
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BU of 5x79 by Molmil
Human GST Pi conjugated with novel inhibitor, GS-ESF
Descriptor: (2S)-2-azanyl-5-[[(2R)-3-(2-fluorosulfonylethylsulfanyl)-1-(2-hydroxy-2-oxoethylamino)-1-oxidanylidene-propan-2-yl]amino]-5-oxidanylidene-pentanoic acid, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, Glutathione S-transferase P
Authors:Tomoike, F, Shishido, Y, Fukui, K, Kimura, Y, Abe, H.
Deposit date:2017-02-24
Release date:2017-09-13
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:A covalent G-site inhibitor for glutathione S-transferase Pi (GSTP1-1).
Chem. Commun. (Camb.), 53, 2017
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