Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
8EWU
DownloadVisualize
BU of 8ewu by Molmil
X-ray structure of the GDP-6-deoxy-4-keto-D-lyxo-heptose-4-reductase from Campylobacter jejuni HS:15
Descriptor: 1,2-ETHANEDIOL, GDP-L-fucose synthase, GUANOSINE-5'-DIPHOSPHATE, ...
Authors:Thoden, J.B, Xiang, D.F, Ghosh, M.K, Riegert, A.S, Raushel, F.M, Holden, H.M.
Deposit date:2022-10-24
Release date:2022-11-09
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Bifunctional Epimerase/Reductase Enzymes Facilitate the Modulation of 6-Deoxy-Heptoses Found in the Capsular Polysaccharides of Campylobacter jejuni.
Biochemistry, 62, 2023
3FDK
DownloadVisualize
BU of 3fdk by Molmil
Crystal structure of hydrolase DR0930 with promiscuous catalytic activity
Descriptor: HYDROLASE DR0930, ZINC ION
Authors:Fedorov, A.A, Fedorov, L.V, Xiang, D.F, Raushel, F.M, Almo, S.C.
Deposit date:2008-11-25
Release date:2009-06-30
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Functional annotation and three-dimensional structure of Dr0930 from Deinococcus radiodurans, a close relative of phosphotriesterase in the amidohydrolase superfamily.
Biochemistry, 48, 2009
3MTW
DownloadVisualize
BU of 3mtw by Molmil
Crystal structure of L-Lysine, L-Arginine carboxypeptidase Cc2672 from Caulobacter Crescentus CB15 complexed with N-methyl phosphonate derivative of L-Arginine
Descriptor: DI(HYDROXYETHYL)ETHER, GLYCEROL, L-Arginine carboxypeptidase Cc2672, ...
Authors:Fedorov, A.A, Fedorov, E.V, Xiang, D.F, Raushel, F.M, Almo, S.C.
Deposit date:2010-05-01
Release date:2010-07-28
Last modified:2021-02-10
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Functional Identification and Structure Determination of Two Novel Prolidases from cog1228 in the Amidohydrolase Superfamily
Biochemistry, 49, 2010
7US5
DownloadVisualize
BU of 7us5 by Molmil
X-ray crystal structure of GDP-D-glycero-D-manno-heptose 4,6-Dehydratase from Campylobacter jejuni
Descriptor: 1,2-ETHANEDIOL, GDP-D-GLYCERO-D-MANNO-HEPTOSE 4,6-DEHYDRATASE, GUANOSINE-5'-DIPHOSPHATE, ...
Authors:Thoden, J.B, Xiang, D.F, Raushel, F.M, Holden, H.M.
Deposit date:2022-04-23
Release date:2022-07-06
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Reaction Mechanism and Three-Dimensional Structure of GDP-d-glycero-alpha-d-manno-heptose 4,6-Dehydratase from Campylobacter jejuni.
Biochemistry, 61, 2022
4QSF
DownloadVisualize
BU of 4qsf by Molmil
CRYSTAL STRUCTURE of AMIDOHYDROLASE PMI1525 (TARGET EFI-500319) FROM PROTEUS MIRABILIS HI4320, A COMPLEX WITH BUTYRIC ACID AND MANGANESE
Descriptor: Amidohydrolase Pmi1525, MANGANESE (II) ION, SULFATE ION, ...
Authors:Patskovsky, Y, Toro, R, Xiang, D.F, Raushel, F.M, Gerlt, J.A, Almo, S.C, Enzyme Function Initiative (EFI)
Deposit date:2014-07-03
Release date:2014-07-30
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Crystal Structure of Amidohydrolase Pmi1525 from Proteus Mirabilis Hi4320
To be Published
8DB5
DownloadVisualize
BU of 8db5 by Molmil
Crystal structure of the GDP-D-glycero-4-keto-d-lyxo-heptose-3,5-epimerase from Campylobacter jejuni, serotype HS:15
Descriptor: CHLORIDE ION, GDP-D-glycero-4-keto-d-lyxo-heptose-3,5-epimerase, GUANOSINE-5'-DIPHOSPHATE
Authors:Thoden, J.B, Ghosh, M.K, Xiang, D.F, Raushel, F.M, Holden, H.M.
Deposit date:2022-06-14
Release date:2022-06-22
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:C3- and C3/C5-Epimerases Required for the Biosynthesis of the Capsular Polysaccharides from Campylobacter jejuni .
Biochemistry, 61, 2022
8DAK
DownloadVisualize
BU of 8dak by Molmil
Crystal structure of the GDP-D-glycero-4-keto-d-lyxo-heptose-3-epimerase from Campylobacter jejuni, serotype HS:3
Descriptor: CHLORIDE ION, GDP-D-glycero-4-keto-d-lyxo-heptose-3-epimerase, GUANOSINE-5'-DIPHOSPHATE, ...
Authors:Thoden, J.B, Ghosh, M.K, Xiang, D.F, Raushel, F.M, Holden, H.M.
Deposit date:2022-06-13
Release date:2022-06-22
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:C3- and C3/C5-Epimerases Required for the Biosynthesis of the Capsular Polysaccharides from Campylobacter jejuni .
Biochemistry, 61, 2022
8DCO
DownloadVisualize
BU of 8dco by Molmil
Crystal structure of the GDP-D-glycero-4-keto-D-lyxo-heptose-3,5-epimerase from Campylobacter jejuni, serotype HS:42
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, GDP-D-glycero-4-keto-D-lyxo-heptose-3,5-epimerase, ...
Authors:Thoden, J.B, Xiang, D.F, Ghosh, M.K, Raushel, F.M, Holden, H.M.
Deposit date:2022-06-17
Release date:2022-06-29
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:C3- and C3/C5-Epimerases Required for the Biosynthesis of the Capsular Polysaccharides from Campylobacter jejuni .
Biochemistry, 61, 2022
8DCL
DownloadVisualize
BU of 8dcl by Molmil
Crystal structure of the GDP-D-glycero-4-keto-D-lyxo-heptose-3-epimerase from campylobacter jejuni, serotype HS:23/36
Descriptor: 1,2-ETHANEDIOL, GDP-D-glycero-4-keto-D-lyxo-heptose-3-epimerase, GUANOSINE-5'-DIPHOSPHATE, ...
Authors:Thoden, J.B, Ghosh, M.K, Xiang, D.F, Raushel, F.M, Holden, H.M.
Deposit date:2022-06-16
Release date:2022-06-29
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:C3- and C3/C5-Epimerases Required for the Biosynthesis of the Capsular Polysaccharides from Campylobacter jejuni .
Biochemistry, 61, 2022
1XWY
DownloadVisualize
BU of 1xwy by Molmil
Crystal structure of tatD deoxyribonuclease from Escherichia coli K12 at 2.0 A resolution
Descriptor: Deoxyribonuclease tatD, ZINC ION
Authors:Malashkevich, V.N, Xiang, D.F, Raushel, F.M, Almo, S.C, Burley, S.K, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2004-11-02
Release date:2005-01-25
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of tatD DNase from Escherichia coli at 2.0 A resolution
To be Published
1YIX
DownloadVisualize
BU of 1yix by Molmil
Crystal structure of YCFH, TATD homolog from Escherichia coli K12, at 1.9 A resolution
Descriptor: ZINC ION, deoxyribonuclease ycfH
Authors:Malashkevich, V.N, Xiang, D.F, Raushel, F.M, Almo, S.C, Burley, S.K, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2005-01-13
Release date:2005-01-25
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structure of ycfH, tatD homolog from Escherichia coli
To be Published
1YMY
DownloadVisualize
BU of 1ymy by Molmil
Crystal Structure of the N-Acetylglucosamine-6-phosphate deacetylase from Escherichia coli K12
Descriptor: N-acetylglucosamine-6-phosphate deacetylase
Authors:Fedorov, A.A, Fedorov, E.V, Xiang, D.F, Raushel, F.M, Almo, S.C, Burley, S.K, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2005-01-21
Release date:2005-02-01
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Crystal structure of the N-acetylglucosamine-6-phosphate deacetylase from Escherichia Coli
To be Published
1ZZM
DownloadVisualize
BU of 1zzm by Molmil
Crystal structure of YJJV, TATD Homolog from Escherichia coli k12, at 1.8 A resolution
Descriptor: 3,6,9,12,15,18-HEXAOXAICOSANE-1,20-DIOL, ZINC ION, putative deoxyribonuclease yjjV
Authors:Malashkevich, V.N, Xiang, D.F, Raushel, F.M, Almo, S.C, Burley, S.K, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2005-06-14
Release date:2005-06-28
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structure of YJJV, TATD homolog from Escherichia coli K12, at 1.8 A resolution
To be Published
3PNZ
DownloadVisualize
BU of 3pnz by Molmil
Crystal structure of the lactonase Lmo2620 from Listeria monocytogenes
Descriptor: GLYCEROL, PHOSPHATE ION, Phosphotriesterase family protein, ...
Authors:Fedorov, A.A, Fedorov, E.V, Xiang, D.F, Raushel, F.M, Almo, S.C.
Deposit date:2010-11-20
Release date:2011-11-23
Method:X-RAY DIFFRACTION (1.5983 Å)
Cite:Crystal structure of the lactonase Lmo2620 from Listeria monocytogenes
To be Published
4KBX
DownloadVisualize
BU of 4kbx by Molmil
Crystal structure of the pyridoxal-5'-phosphate dependent protein yhfx from escherichia coli
Descriptor: CHLORIDE ION, GLYCEROL, SULFATE ION, ...
Authors:Fedorov, A.A, Fedorov, E.V, Xiang, D.F, Raushel, F.M, Almo, S.C.
Deposit date:2013-04-24
Release date:2014-05-21
Method:X-RAY DIFFRACTION (1.599 Å)
Cite:Crystal structure of the pyridoxal-5'-phosphate dependent protein yhfx from escherichia coli
To be Published
4LEF
DownloadVisualize
BU of 4lef by Molmil
Crystal structure of PHOSPHOTRIESTERASE HOMOLOGY PROTEIN FROM ESCHERICHIA COLI complexed with phosphate in active site
Descriptor: PHOSPHATE ION, Phosphotriesterase homology protein, ZINC ION, ...
Authors:Fedorov, A.A, Fedorov, E.V, Xiang, D.F, Raushel, F.M, Almo, S.C.
Deposit date:2013-06-25
Release date:2014-06-25
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.842 Å)
Cite:Crystal structure of PHOSPHOTRIESTERASE HOMOLOGY PROTEIN FROM ESCHERICHIA COLI complexed with phosphate in active site
To be Published
4J8L
DownloadVisualize
BU of 4j8l by Molmil
CRYSTAL STRUCTURE OF THE PYRIDOXAL-5'-PHOSPHATE DEPENDENT protein YhfS from Escherichia coli
Descriptor: ACETIC ACID, DI(HYDROXYETHYL)ETHER, NICKEL (II) ION, ...
Authors:Fedorov, A.A, Fedorov, E.V, Xiang, D.F, Raushel, F.M, Almo, S.C.
Deposit date:2013-02-14
Release date:2014-03-05
Method:X-RAY DIFFRACTION (1.651 Å)
Cite:Crystal structure of the pyridoxal-5'-phosphate dependent protein yhfs from escherichia coli
To be Published
2QS8
DownloadVisualize
BU of 2qs8 by Molmil
Crystal structure of a Xaa-Pro dipeptidase with bound methionine in the active site
Descriptor: MAGNESIUM ION, METHIONINE, Xaa-Pro Dipeptidase
Authors:Kumaran, D, Burley, S.K, Swaminathan, S, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2007-07-30
Release date:2007-08-21
Last modified:2021-02-03
Method:X-RAY DIFFRACTION (2.33 Å)
Cite:Functional annotation of two new carboxypeptidases from the amidohydrolase superfamily of enzymes.
Biochemistry, 48, 2009
3DUG
DownloadVisualize
BU of 3dug by Molmil
Crystal structure of zn-dependent arginine carboxypeptidase complexed with zinc
Descriptor: ARGININE, GLYCEROL, ZINC ION, ...
Authors:Patskovsky, Y, Ramagopal, U.A, Toro, R, Meyer, A.J, Freeman, J, Iizuka, M, Bain, K, Rodgers, L, Raushel, F, Sauder, J.M, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2008-07-17
Release date:2008-08-05
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.62 Å)
Cite:Functional identification of incorrectly annotated prolidases from the amidohydrolase superfamily of enzymes.
Biochemistry, 48, 2009
3FEQ
DownloadVisualize
BU of 3feq by Molmil
Crystal structure of uncharacterized protein eah89906
Descriptor: PUTATIVE AMIDOHYDROLASE, ZINC ION
Authors:Patskovsky, Y, Bonanno, J, Romero, R, Freeman, J, Lau, C, Smith, D, Bain, K, Wasserman, S.R, Raushel, F, Sauder, J.M, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2008-11-30
Release date:2008-12-16
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.63 Å)
Cite:Functional identification and structure determination of two novel prolidases from cog1228 in the amidohydrolase superfamily .
Biochemistry, 49, 2010
3N2C
DownloadVisualize
BU of 3n2c by Molmil
Crystal structure of prolidase eah89906 complexed with n-methylphosphonate-l-proline
Descriptor: 1-[(R)-hydroxy(methyl)phosphoryl]-L-proline, PROLIDASE, ZINC ION
Authors:Patskovsky, Y, Xu, C, Sauder, J.M, Burley, S.K, Raushel, F.M, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2010-05-17
Release date:2010-06-02
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.81 Å)
Cite:Functional identification and structure determination of two novel prolidases from cog1228 in the amidohydrolase superfamily .
Biochemistry, 49, 2010
3MKV
DownloadVisualize
BU of 3mkv by Molmil
Crystal structure of amidohydrolase eaj56179
Descriptor: CARBONATE ION, GLYCEROL, PUTATIVE AMIDOHYDROLASE, ...
Authors:Patskovsky, Y, Bonanno, J, Ozyurt, S, Sauder, J.M, Freeman, J, Wu, B, Smith, D, Bain, K, Rodgers, L, Wasserman, S.R, Raushel, F.M, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2010-04-15
Release date:2010-04-28
Last modified:2021-02-10
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Functional identification and structure determination of two novel prolidases from cog1228 in the amidohydrolase superfamily .
Biochemistry, 49, 2010
3BE7
DownloadVisualize
BU of 3be7 by Molmil
Crystal structure of Zn-dependent arginine carboxypeptidase
Descriptor: ARGININE, GLYCEROL, MAGNESIUM ION, ...
Authors:Patskovsky, Y, Ramagopal, U.A, Toro, R, Meyer, A.J, Freeman, J, Iizuka, M, Bain, K, Rodgers, L, Raushel, F, Sauder, J.M, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2007-11-16
Release date:2007-11-27
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Functional identification of incorrectly annotated prolidases from the amidohydrolase superfamily of enzymes.
Biochemistry, 48, 2009
5HRM
DownloadVisualize
BU of 5hrm by Molmil
Crystal structure of phosphotriesterase from Sphingobium sp. TCM1
Descriptor: Haloalkylphosphorus hydrolase, MANGANESE (II) ION
Authors:Mabanglo, M.F, Raushel, F.M.
Deposit date:2016-01-23
Release date:2016-07-13
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.051 Å)
Cite:Structure of a Novel Phosphotriesterase from Sphingobium sp. TCM1: A Familiar Binuclear Metal Center Embedded in a Seven-Bladed beta-Propeller Protein Fold.
Biochemistry, 55, 2016
5IOJ
DownloadVisualize
BU of 5ioj by Molmil
Crystal structure of the Sphingobium sp. TCM1 phosphotriesterase without the binuclear manganese center
Descriptor: Haloalkylphosphorus hydrolase
Authors:Mabanglo, M.F, Raushel, F.M.
Deposit date:2016-03-08
Release date:2016-07-13
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (1.76 Å)
Cite:Structure of a Novel Phosphotriesterase from Sphingobium sp. TCM1: A Familiar Binuclear Metal Center Embedded in a Seven-Bladed beta-Propeller Protein Fold.
Biochemistry, 55, 2016

226707

PDB entries from 2024-10-30

PDB statisticsPDBj update infoContact PDBjnumon