5GSL
 
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5GSM
 | | Glycoside hydrolase B with product | | 分子名称: | 2-[3-(2-HYDROXY-1,1-DIHYDROXYMETHYL-ETHYLAMINO)-PROPYLAMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 2-amino-2-deoxy-beta-D-glucopyranose, DI(HYDROXYETHYL)ETHER, ... | | 著者 | Watanabe, M, Kamachi, S, Mine, S. | | 登録日 | 2016-08-16 | | 公開日 | 2017-02-01 | | 最終更新日 | 2024-03-20 | | 実験手法 | X-RAY DIFFRACTION (1.27 Å) | | 主引用文献 | Glycoside hydrolase B with product
To Be Published
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5HXV
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7CFO
 | | Crystal structure of human RXRalpha ligand binding domain complexed with CBTF-EE. | | 分子名称: | 1-[3-(2-ethoxyethoxy)-5,5,8,8-tetramethyl-6,7-dihydronaphthalen-2-yl]-2-(trifluoromethyl)benzimidazole-5-carboxylic acid, GLYCEROL, Retinoic acid receptor RXR-alpha | | 著者 | Watanabe, M, Fujihara, M, Motoyama, T, Kawasaki, M, Yamada, S, Takamura, Y, Ito, S, Makishima, M, Nakano, S, Kakuta, H. | | 登録日 | 2020-06-27 | | 公開日 | 2021-01-06 | | 最終更新日 | 2023-11-29 | | 実験手法 | X-RAY DIFFRACTION (2.15 Å) | | 主引用文献 | Discovery of a "Gatekeeper" Antagonist that Blocks Entry Pathway to Retinoid X Receptors (RXRs) without Allosteric Ligand Inhibition in Permissive RXR Heterodimers.
J.Med.Chem., 64, 2021
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5B5S
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2ZD0
 | | Crystal structures and thermostability of mutant TRAP3 A5 (ENGINEERED TRAP) | | 分子名称: | TRYPTOPHAN, Transcription attenuation protein mtrB | | 著者 | Watanabe, M, Mishima, Y, Yamashita, I, Park, S.Y, Tame, J.R.H, Heddle, J.G. | | 登録日 | 2007-11-15 | | 公開日 | 2008-04-29 | | 最終更新日 | 2023-11-01 | | 実験手法 | X-RAY DIFFRACTION (2.5 Å) | | 主引用文献 | Intersubunit linker length as a modifier of protein stability: crystal structures and thermostability of mutant TRAP.
Protein Sci., 17, 2008
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2ZP9
 | | The Nature of the TRAP:Anti-TRAP complex | | 分子名称: | TRYPTOPHAN, Transcription attenuation protein mtrB, Tryptophan RNA-binding attenuator protein-inhibitory protein, ... | | 著者 | Watanabe, M, Heddle, J.G, Unzai, S, Akashi, S, Park, S.Y, Tame, J.R.H. | | 登録日 | 2008-07-08 | | 公開日 | 2009-02-03 | | 最終更新日 | 2023-11-01 | | 実験手法 | X-RAY DIFFRACTION (3.2 Å) | | 主引用文献 | The nature of the TRAP-Anti-TRAP complex.
Proc.Natl.Acad.Sci.USA, 106, 2009
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2ZP8
 | | The Nature of the TRAP:Anti-TRAP complex | | 分子名称: | TRYPTOPHAN, Transcription attenuation protein mtrB, Tryptophan RNA-binding attenuator protein-inhibitory protein, ... | | 著者 | Watanabe, M, Heddle, J.G, Unzai, S, Akashi, S, Park, S.Y, Tame, J.R.H. | | 登録日 | 2008-07-08 | | 公開日 | 2009-02-03 | | 最終更新日 | 2023-11-01 | | 実験手法 | X-RAY DIFFRACTION (3.2 Å) | | 主引用文献 | The nature of the TRAP-Anti-TRAP complex.
Proc.Natl.Acad.Sci.USA, 106, 2009
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2ZCZ
 | | Crystal structures and thermostability of mutant TRAP3 A7 (ENGINEERED TRAP) | | 分子名称: | TRYPTOPHAN, Transcription attenuation protein mtrB | | 著者 | Watanabe, M, Mishima, Y, Yamashita, I, Park, S.Y, Tame, J.R.H, Heddle, J.G. | | 登録日 | 2007-11-15 | | 公開日 | 2008-04-29 | | 最終更新日 | 2023-11-01 | | 実験手法 | X-RAY DIFFRACTION (1.8 Å) | | 主引用文献 | Intersubunit linker length as a modifier of protein stability: crystal structures and thermostability of mutant TRAP.
Protein Sci., 17, 2008
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7WDP
 | | Crystal structures of MeBglD2 in complex with various saccharides | | 分子名称: | Beta-glucosidase, SULFATE ION, alpha-D-glucopyranose, ... | | 著者 | Watanabe, M, Matsuzawa, T, Nakamichi, Y, Akita, H, Yaoi, K. | | 登録日 | 2021-12-22 | | 公開日 | 2022-11-02 | | 最終更新日 | 2023-11-29 | | 実験手法 | X-RAY DIFFRACTION (2.39 Å) | | 主引用文献 | Crystal structure of metagenomic beta-glycosidase MeBglD2 in complex with various saccharides
Appl.Microbiol.Biotechnol., 106, 2022
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7WDO
 | | Crystal structures of MeBglD2 in complex with various saccharides | | 分子名称: | Beta-glucosidase, SULFATE ION, beta-D-glucopyranose, ... | | 著者 | Watanabe, M, Matsuzawa, T, Nakamichi, Y, Akita, H, Yaoi, K. | | 登録日 | 2021-12-22 | | 公開日 | 2022-11-02 | | 最終更新日 | 2023-11-29 | | 実験手法 | X-RAY DIFFRACTION (2.21 Å) | | 主引用文献 | Crystal structure of metagenomic beta-glycosidase MeBglD2 in complex with various saccharides
Appl.Microbiol.Biotechnol., 106, 2022
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7WDS
 | | Crystal structures of MeBglD2 in complex with various saccharides | | 分子名称: | Beta-glucosidase, SULFATE ION, beta-D-xylopyranose | | 著者 | Watanabe, M, Matsuzawa, T, Nakamichi, Y, Akita, H, Yaoi, K. | | 登録日 | 2021-12-22 | | 公開日 | 2022-11-02 | | 最終更新日 | 2023-11-29 | | 実験手法 | X-RAY DIFFRACTION (1.68 Å) | | 主引用文献 | Crystal structure of metagenomic beta-glycosidase MeBglD2 in complex with various saccharides
Appl.Microbiol.Biotechnol., 106, 2022
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7WDV
 | | Crystal structures of MeBglD2 in complex with various saccharides | | 分子名称: | Beta-glucosidase, SULFATE ION, beta-D-glucopyranose, ... | | 著者 | Watanabe, M, Matsuzawa, T, Nakamichi, Y, Akita, H, Yaoi, K. | | 登録日 | 2021-12-22 | | 公開日 | 2022-11-02 | | 最終更新日 | 2023-11-29 | | 実験手法 | X-RAY DIFFRACTION (1.812 Å) | | 主引用文献 | Crystal structure of metagenomic beta-glycosidase MeBglD2 in complex with various saccharides
Appl.Microbiol.Biotechnol., 106, 2022
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7WDR
 | | Crystal structures of MeBglD2 in complex with various saccharides | | 分子名称: | 4-nitrophenyl beta-D-glucopyranoside, Beta-glucosidase, SULFATE ION | | 著者 | Watanabe, M, Matsuzawa, T, Nakamichi, Y, Akita, H, Yaoi, K. | | 登録日 | 2021-12-22 | | 公開日 | 2022-11-02 | | 最終更新日 | 2023-11-29 | | 実験手法 | X-RAY DIFFRACTION (2 Å) | | 主引用文献 | Crystal structure of metagenomic beta-glycosidase MeBglD2 in complex with various saccharides
Appl.Microbiol.Biotechnol., 106, 2022
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7WDN
 | | Crystal structures of MeBglD2 in complex with various saccharides | | 分子名称: | alpha-D-glucopyranose, beta-glucosidase | | 著者 | Watanabe, M, Matsuzawa, T, Nakamichi, Y, Akita, H, Yaoi, K. | | 登録日 | 2021-12-22 | | 公開日 | 2023-01-04 | | 最終更新日 | 2023-02-08 | | 実験手法 | X-RAY DIFFRACTION (1.8 Å) | | 主引用文献 | Crystal structure of metagenomic beta-glycosidase MeBglD2 in complex with various saccharides.
Appl.Microbiol.Biotechnol., 106, 2022
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5XGZ
 | | Metagenomic glucose-tolerant glycosidase | | 分子名称: | Beta-glycosidase, GLYCEROL, NICKEL (II) ION, ... | | 著者 | Watanabe, M, Matsuzawa, T, Yaoi, K. | | 登録日 | 2017-04-19 | | 公開日 | 2018-05-02 | | 最終更新日 | 2023-11-22 | | 実験手法 | X-RAY DIFFRACTION (1.75 Å) | | 主引用文献 | Improved thermostability of a metagenomic glucose-tolerant beta-glycosidase based on its X-ray crystal structure.
Appl.Microbiol.Biotechnol., 101, 2017
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3VU3
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4D7Y
 | | Crystal structure of mouse C1QL1 globular domain | | 分子名称: | C1Q-RELATED FACTOR, CADMIUM ION, CHLORIDE ION, ... | | 著者 | Kakegawa, W, Mitakidis, N, Miura, E, Abe, M, Matsuda, K, Takeo, Y, Kohda, K, Motohashi, J, Takahashi, A, Nagao, S, Muramatsu, S, Watanabe, M, Sakimura, K, Aricescu, A.R, Yuzaki, M. | | 登録日 | 2014-12-01 | | 公開日 | 2015-01-28 | | 最終更新日 | 2023-12-20 | | 実験手法 | X-RAY DIFFRACTION (1.44 Å) | | 主引用文献 | Anterograde C1Ql1 Signaling is Required in Order to Determine and Maintain a Single-Winner Climbing Fiber in the Mouse Cerebellum
Neuron, 85, 2015
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8HX6
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8HX8
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8HX7
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8HX9
 | | Crystal structure of 4-amino-4-deoxychorismate synthase from Streptomyces venezuelae with chorismate | | 分子名称: | (3R,4R)-3-[(1-carboxyethenyl)oxy]-4-hydroxycyclohexa-1,5-diene-1-carboxylic acid, 4-amino-4-deoxychorismate synthase, FORMIC ACID, ... | | 著者 | Nakamichi, Y, Watanabe, M. | | 登録日 | 2023-01-04 | | 公開日 | 2023-10-18 | | 最終更新日 | 2023-11-15 | | 実験手法 | X-RAY DIFFRACTION (2.03 Å) | | 主引用文献 | Structural basis for the allosteric pathway of 4-amino-4-deoxychorismate synthase.
Acta Crystallogr D Struct Biol, 79, 2023
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2KWC
 | | The NMR structure of the autophagy-related protein Atg8 | | 分子名称: | Autophagy-related protein 8 | | 著者 | Kumeta, H, Watanabe, M, Nakatogawa, H, Yamaguchi, M, Ogura, K, Adachi, W, Fujioka, Y, Noda, N.N, Ohsumi, Y, Inagaki, F. | | 登録日 | 2010-04-05 | | 公開日 | 2010-05-12 | | 最終更新日 | 2023-06-14 | | 実験手法 | SOLUTION NMR | | 主引用文献 | The NMR structure of the autophagy-related protein Atg8
J.Biomol.Nmr, 47, 2010
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4YPJ
 | | X-ray Structure of The Mutant of Glycoside Hydrolase | | 分子名称: | Beta galactosidase | | 著者 | Ishikawa, K, Kataoka, M, Yanamoto, T, Nakabayashi, M, Watanabe, M. | | 登録日 | 2015-03-13 | | 公開日 | 2015-04-29 | | 最終更新日 | 2024-03-20 | | 実験手法 | X-RAY DIFFRACTION (2.5 Å) | | 主引用文献 | Crystal structure of beta-galactosidase from Bacillus circulans ATCC 31382 (BgaD) and the construction of the thermophilic mutants.
Febs J., 282, 2015
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7F8O
 | | Cryo-EM structure of the C-terminal deletion mutant of human PANX1 in a nanodisc | | 分子名称: | 1-palmitoyl-2-oleoyl-sn-glycero-3-phosphocholine, Pannexin-1 | | 著者 | Kuzuya, M, Hirano, H, Hayashida, K, Watanabe, M, Kobayashi, K, Tani, K, Fujiyoshi, Y, Oshima, A. | | 登録日 | 2021-07-02 | | 公開日 | 2022-01-26 | | 最終更新日 | 2022-02-23 | | 実験手法 | ELECTRON MICROSCOPY (3.6 Å) | | 主引用文献 | Structures of human pannexin-1 in nanodiscs reveal gating mediated by dynamic movement of the N terminus and phospholipids.
Sci.Signal., 15, 2022
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