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1BU5
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BU of 1bu5 by Molmil
X-RAY CRYSTAL STRUCTURE OF THE DESULFOVIBRIO VULGARIS (HILDENBOROUGH) APOFLAVODOXIN-RIBOFLAVIN COMPLEX
分子名称: PROTEIN (FLAVODOXIN), RIBOFLAVIN, SULFATE ION
著者Walsh, M.A, Mccarthy, A, O'Farrell, P.A, Mccardle, P, Cunningham, P.D, Mayhew, S.G, Higgins, T.M.
登録日1998-09-12
公開日1999-02-09
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.83 Å)
主引用文献X-ray crystal structure of the Desulfovibrio vulgaris (Hildenborough) apoflavodoxin-riboflavin complex.
Eur.J.Biochem., 258, 1998
3LZT
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BU of 3lzt by Molmil
REFINEMENT OF TRICLINIC LYSOZYME AT ATOMIC RESOLUTION
分子名称: ACETATE ION, LYSOZYME, NITRATE ION
著者Walsh, M.A, Schneider, T, Sieker, L.C, Dauter, Z, Lamzin, V, Wilson, K.S.
登録日1997-03-23
公開日1998-03-25
最終更新日2023-08-09
実験手法X-RAY DIFFRACTION (0.925 Å)
主引用文献Refinement of triclinic hen egg-white lysozyme at atomic resolution.
Acta Crystallogr.,Sect.D, 54, 1998
4LZT
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ATOMIC RESOLUTION REFINEMENT OF TRICLINIC HEW LYSOZYME AT 295K
分子名称: LYSOZYME, NITRATE ION
著者Walsh, M.A, Schneider, T, Sieker, L.C, Dauter, Z, Lamzin, V, Wilson, K.S.
登録日1997-03-31
公開日1998-04-01
最終更新日2023-08-09
実験手法X-RAY DIFFRACTION (0.95 Å)
主引用文献Refinement of triclinic hen egg-white lysozyme at atomic resolution.
Acta Crystallogr.,Sect.D, 54, 1998
1SRV
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BU of 1srv by Molmil
THERMUS THERMOPHILUS GROEL (HSP60 CLASS) FRAGMENT (APICAL DOMAIN) COMPRISING RESIDUES 192-336
分子名称: PROTEIN (GROEL (HSP60 CLASS))
著者Walsh, M.A, Dementieva, I, Evans, G, Sanishvili, R, Joachimiak, A.
登録日1999-03-02
公開日1999-03-12
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Taking MAD to the extreme: ultrafast protein structure determination.
Acta Crystallogr.,Sect.D, 55, 1999
1DW9
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BU of 1dw9 by Molmil
Structure of cyanase reveals that a novel dimeric and decameric arrangement of subunits is required for formation of the enzyme active site
分子名称: CHLORIDE ION, CYANATE LYASE, SULFATE ION
著者Walsh, M.A, Otwinowski, Z, Perrakis, A, Anderson, P.M, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
登録日1999-12-03
公開日2000-05-16
最終更新日2019-08-21
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Structure of Cyanase Reveals that a Novel Dimeric and Decameric Arrangement of Subunits is Required for Formation of the Enzyme Active Site
Structure, 8, 2000
1DWK
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BU of 1dwk by Molmil
STRUCTURE OF CYANASE WITH THE DI-ANION OXALATE BOUND AT THE ENZYME ACTIVE SITE
分子名称: CYANATE HYDRATASE, OXALATE ION, SULFATE ION
著者Walsh, M.A, Otwinowski, Z, Perrakis, A, Anderson, P.M, Joachimiak, A.
登録日1999-12-07
公開日2000-05-16
最終更新日2023-12-06
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Structure of Cyanase Reveals that a Novel Dimeric and Decameric Arrangement of Subunits is Required for Formation of the Enzyme Active Site.
Structure, 8, 2000
1AZL
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BU of 1azl by Molmil
G61V FLAVODOXIN MUTANT FROM DESULFOVIBRIO VULGARIS
分子名称: FLAVIN MONONUCLEOTIDE, FLAVODOXIN
著者Walsh, M.A, Mccarthy, A, O'Farrell, P.A, Voordouw, G, Higgins, T, Mayhew, S.G.
登録日1997-11-18
公開日1998-05-20
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Modulation of the redox potentials of FMN in Desulfovibrio vulgaris flavodoxin: thermodynamic properties and crystal structures of glycine-61 mutants.
Biochemistry, 37, 1998
7Z4S
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BU of 7z4s by Molmil
Crystal structure of SARS-CoV-2 Mpro in complex with cyclic peptide GM4 including unnatural amino acids.
分子名称: 1,2-ETHANEDIOL, 3C-like proteinase nsp5, DI(HYDROXYETHYL)ETHER, ...
著者Owen, C.D, Miura, T, Malla, T, Lukacik, L, Strain-Damerell, C.M, Tumber, A, Brewitz, L, McDonough, M.A, Salah, E, Terasaka, N, Katoh, T, Kawamura, A, Schofield, C.J, Suga, H, Walsh, M.A.
登録日2022-03-04
公開日2023-03-22
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献In vitro selection of macrocyclic peptide inhibitors containing cyclic gamma 2,4 -amino acids targeting the SARS-CoV-2 main protease.
Nat.Chem., 15, 2023
7AEH
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SARS-CoV-2 main protease in a covalent complex with a pyridine derivative of ABT-957, compound 1
分子名称: (2~{R})-5-oxidanylidene-~{N}-[(2~{R},3~{S})-3-oxidanyl-4-oxidanylidene-1-phenyl-4-(pyridin-2-ylmethylamino)butan-2-yl]-1-(phenylmethyl)pyrrolidine-2-carboxamide, 3C-like proteinase nsp5, DIMETHYL SULFOXIDE
著者Owen, C.D, Redhead, M.A, Lukacik, P, Strain-Damerell, C, Fearon, D, Brewitz, L, Collette, A, Robinson, C, Collins, P, Radoux, C, Navratilova, I, Douangamath, A, von Delft, F, Malla, T.R, Nugen, T, Hull, H, Tumber, A, Schofield, C.J, Hallet, D, Stuart, D.I, Hopkins, A.L, Walsh, M.A.
登録日2020-09-17
公開日2021-07-07
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.3 Å)
主引用文献Bispecific repurposed medicines targeting the viral and immunological arms of COVID-19.
Sci Rep, 11, 2021
7Z59
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BU of 7z59 by Molmil
SARS-CoV-2 main protease (Mpro) covalently modified with a penicillin derivative
分子名称: (3S)-4-[[2,4-bis(fluoranyl)phenyl]methoxy]-2-methyl-4-oxidanylidene-3-[[(Z)-3-oxidanylidene-2-(2-phenoxyethanoylamino)prop-1-enyl]amino]butane-2-sulfinic acid, 1,2-ETHANEDIOL, 3C-like proteinase nsp5
著者Owen, C.D, Malla, T.R, Brewitz, L, Lukacik, P, Strain-Damerell, C, Mikolajek, H, Muntean, D.G, Aslam, H, Salah, E, Tumber, A, Schofield, C.J, Walsh, M.A.
登録日2022-03-08
公開日2022-06-29
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Penicillin Derivatives Inhibit the SARS-CoV-2 Main Protease by Reaction with Its Nucleophilic Cysteine.
J.Med.Chem., 65, 2022
8B2T
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BU of 8b2t by Molmil
SARS-CoV-2 Main Protease (Mpro) in complex with nirmatrelvir alkyne
分子名称: 3C-like proteinase nsp5, Nirmatrelvir (reacted form)
著者Owen, C.D, Crawshaw, A.D, Warren, A.J, Trincao, J, Zhao, Y, Brewitz, L, Malla, T.R, Salah, E, Petra, L, Strain-Damerell, C, Schofield, C.J, Walsh, M.A.
登録日2022-09-14
公開日2023-02-22
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.893 Å)
主引用文献Alkyne Derivatives of SARS-CoV-2 Main Protease Inhibitors Including Nirmatrelvir Inhibit by Reacting Covalently with the Nucleophilic Cysteine.
J.Med.Chem., 66, 2023
7AEG
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BU of 7aeg by Molmil
SARS-CoV-2 main protease in a covalent complex with SDZ 224015 derivative, compound 5
分子名称: 3C-like proteinase, DIMETHYL SULFOXIDE, N-[(benzyloxy)carbonyl]-L-valyl-N-[(1S)-1-(carboxymethyl)-3-fluoro-2-oxopropyl]-L-alaninamide
著者Owen, C.D, Redhead, M.A, Lukacik, P, Strain-Damerell, C, Fearon, D, Brewitz, L, Collette, A, Robinson, C, Collins, P, Radoux, C, Navratilova, I, Douangamath, A, von Delft, F, Malla, T.R, Nugen, T, Hull, H, Tumber, A, Schofield, C.J, Hallet, D, Stuart, D.I, Hopkins, A.L, Walsh, M.A.
登録日2020-09-17
公開日2021-07-07
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Bispecific repurposed medicines targeting the viral and immunological arms of COVID-19.
Sci Rep, 11, 2021
6YB7
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BU of 6yb7 by Molmil
SARS-CoV-2 main protease with unliganded active site (2019-nCoV, coronavirus disease 2019, COVID-19).
分子名称: 3C-like proteinase, DI(HYDROXYETHYL)ETHER, DIMETHYL SULFOXIDE
著者Owen, C.D, Lukacik, P, Strain-Damerell, C.M, Douangamath, A, Powell, A.J, Fearon, D, Brandao-Neto, J, Crawshaw, A.D, Aragao, D, Williams, M, Flaig, R, Hall, D.R, McAuley, K.E, Mazzorana, M, Stuart, D.I, von Delft, F, Walsh, M.A.
登録日2020-03-16
公開日2020-03-25
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.25 Å)
主引用文献COVID-19 main protease with unliganded active site
To Be Published
6Y84
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BU of 6y84 by Molmil
SARS-CoV-2 main protease with unliganded active site (2019-nCoV, coronavirus disease 2019, COVID-19)
分子名称: 3C-like proteinase nsp5, DIMETHYL SULFOXIDE
著者Owen, C.D, Lukacik, P, Strain-Damerell, C.M, Douangamath, A, Powell, A.J, Fearon, D, Brandao-Neto, J, Crawshaw, A.D, Aragao, D, Williams, M, Flaig, R, Hall, D.R, McAuley, K.E, Mazzorana, M, Stuart, D.I, von Delft, F, Walsh, M.A.
登録日2020-03-03
公開日2020-03-11
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.39 Å)
主引用文献COVID-19 main protease with unliganded active site
To Be Published
5G62
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BU of 5g62 by Molmil
S.pneumoniae ABC-transporter substrate binding protein FusA EF-hand mutant in complex with fructo-nystose
分子名称: ABC TRANSPORTER, SUBSTRATE-BINDING PROTEIN, CALCIUM ION, ...
著者Culurgioni, S, Harris, G, Singh, A.K, King, S.J, Walsh, M.A.
登録日2016-06-10
公開日2017-01-18
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.99 Å)
主引用文献Structural Basis for Regulation and Specificity of Fructooligosaccharide Import in Streptococcus pneumoniae.
Structure, 25, 2017
5G61
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S.pneumoniae ABC-transporter substrate binding protein FusA in complex with fructo-nystose
分子名称: ABC TRANSPORTER, SUBSTRATE-BINDING PROTEIN, CALCIUM ION, ...
著者Culurgioni, S, Harris, G, Singh, A.K, King, S.J, Walsh, M.A.
登録日2016-06-10
公開日2017-01-18
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Structural Basis for Regulation and Specificity of Fructooligosaccharide Import in Streptococcus pneumoniae.
Structure, 25, 2017
5G5Z
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S.pneumoniae ABC-transporter substrate binding protein FusA in complex with kestose
分子名称: ABC TRANSPORTER, SUBSTRATE-BINDING PROTEIN, CALCIUM ION, ...
著者Culurgioni, S, Harris, G, Singh, A.K, King, S.J, Walsh, M.A.
登録日2016-06-10
公開日2017-01-18
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.01 Å)
主引用文献Structural Basis for Regulation and Specificity of Fructooligosaccharide Import in Streptococcus pneumoniae.
Structure, 25, 2017
5G5Y
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BU of 5g5y by Molmil
S.pneumoniae ABC-transporter substrate binding protein FusA apo structure
分子名称: ABC TRANSPORTER, SUBSTRATE-BINDING PROTEIN, CALCIUM ION, ...
著者Culurgioni, S, Harris, G, Singh, A.K, King, S.J, Walsh, M.A.
登録日2016-06-10
公開日2017-01-18
実験手法X-RAY DIFFRACTION (1.73 Å)
主引用文献Structural Basis for Regulation and Specificity of Fructooligosaccharide Import in Streptococcus pneumoniae.
Structure, 25, 2017
5G60
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BU of 5g60 by Molmil
S.pneumoniae ABC-transporter substrate binding protein FusA in complex with nystose
分子名称: ABC TRANSPORTER, SUBSTRATE-BINDING PROTEIN, CALCIUM ION, ...
著者Culurgioni, S, Harris, G, Singh, A.K, King, S.J, Walsh, M.A.
登録日2016-06-10
公開日2017-01-18
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.99 Å)
主引用文献Structural Basis for Regulation and Specificity of Fructooligosaccharide Import in Streptococcus pneumoniae.
Structure, 25, 2017
6AC6
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BU of 6ac6 by Molmil
Ab initio crystal structure of Selenomethionine labelled Mycobacterium smegmatis Mfd
分子名称: Mycobacterium smegmatis Mfd, SULFATE ION
著者Putta, S, Fox, G.C, Walsh, M.A, Rao, D.N, Nagaraja, V, Natesh, R.
登録日2018-07-25
公開日2019-08-28
実験手法X-RAY DIFFRACTION (2.989 Å)
主引用文献Structural basis for nucleotide-mediated remodelling mechanism of Mycobacterium Mfd
To Be Published
6ACA
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BU of 6aca by Molmil
Crystal structure of Mycobacterium tuberculosis Mfd at 3.6 A resolution
分子名称: Mycobacterium tuberculosis Mfd
著者Putta, S, Fox, G.C, Walsh, M.A, Rao, D.N, Nagaraja, V, Natesh, R.
登録日2018-07-26
公開日2019-08-28
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (3.6 Å)
主引用文献Structural basis for nucleotide-mediated remodelling mechanism of Mycobacterium Mfd
To Be Published
6AC8
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Crystal structure of Mycobacterium smegmatis Mfd at 2.75 A resolution
分子名称: Mycobacterium smegmatis Mfd, SULFATE ION
著者Putta, S, Fox, G.C, Walsh, M.A, Rao, D.N, Nagaraja, V, Natesh, R.
登録日2018-07-25
公開日2019-08-28
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.75 Å)
主引用文献Structural basis for nucleotide-mediated remodelling mechanism of Mycobacterium Mfd
To Be Published
6ACX
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BU of 6acx by Molmil
Crystal structure of Mycobacterium smegmatis Mfd in complex with ADP + Pi at 3.5 A resolution.
分子名称: ADENOSINE-5'-DIPHOSPHATE, Mycobacterium smegmatis Mfd, PHOSPHATE ION, ...
著者Putta, S, Fox, G.C, Walsh, M.A, Rao, D.N, Nagaraja, V, Natesh, R.
登録日2018-07-27
公開日2019-08-28
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (3.5 Å)
主引用文献Structural basis for nucleotide-mediated remodelling mechanism of Mycobacterium Mfd
To Be Published
7QT9
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BU of 7qt9 by Molmil
Room temperature In-situ SARS-CoV-2 MPRO with bound Z4439011584
分子名称: DIMETHYL SULFOXIDE, N-(5-tert-butyl-1H-pyrazol-3-yl)-N-[(1R)-2-[(2-ethyl-6-methylphenyl)amino]-2-oxo-1-(pyridin-3-yl)ethyl]propanamide, Non-structural protein 6
著者Horrell, S, Gildae, R.J, Axford, D, Owen, C.D, Lukacik, P, Strain-Damerell, C, Owen, R.L, Walsh, M.A.
登録日2022-01-14
公開日2022-05-04
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.43 Å)
主引用文献xia2.multiplex: a multi-crystal data-analysis pipeline.
Acta Crystallogr D Struct Biol, 78, 2022
7QT8
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Room temperature In-situ SARS-CoV-2 MPRO with bound ABT-957
分子名称: (2~{R})-5-oxidanylidene-~{N}-[(2~{R},3~{S})-3-oxidanyl-4-oxidanylidene-1-phenyl-4-(pyridin-2-ylmethylamino)butan-2-yl]-1-(phenylmethyl)pyrrolidine-2-carboxamide, 3C-like proteinase
著者Horrell, S, Gildae, R.J, Axford, D, Owen, C.D, Lukacik, P, Strain-Damerell, C, Owen, R.L, Walsh, M.A.
登録日2022-01-14
公開日2022-05-04
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.01 Å)
主引用文献xia2.multiplex: a multi-crystal data-analysis pipeline.
Acta Crystallogr D Struct Biol, 78, 2022

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