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7O43
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BU of 7o43 by Molmil
TrwK/VirB4unbound dimer complex from R388 type IV secretion system determined by cryo-EM.
Descriptor: TrwK protein
Authors:Vadakkepat, A.K, Mace, K, Lukoyanova, N, Waksman, G.
Deposit date:2021-04-04
Release date:2022-06-22
Last modified:2022-07-20
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Cryo-EM structure of a type IV secretion system.
Nature, 607, 2022
3Q48
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BU of 3q48 by Molmil
Crystal structure of Pseudomonas aeruginosa CupB2 chaperone
Descriptor: Chaperone CupB2
Authors:Cai, X, Wang, R, Filloux, A, Waksman, G, Meng, G.
Deposit date:2010-12-23
Release date:2011-02-09
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structural and functional characterization of Pseudomonas aeruginosa CupB chaperones
Plos One, 6, 2011
5FLU
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BU of 5flu by Molmil
Structure of a Chaperone-Usher pilus reveals the molecular basis of rod uncoilin
Descriptor: PAP FIMBRIAL MAJOR PILIN PROTEIN
Authors:Hospenthal, M.K, Redzej, A, Dodson, K, Ukleja, M, Frenz, B, Hultgren, S.J, DiMaio, F, Egelman, E.H, Waksman, G.
Deposit date:2015-10-28
Release date:2016-01-13
Last modified:2019-10-23
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:Structure of a Chaperone-Usher Pilus Reveals the Molecular Basis of Rod Uncoiling.
Cell(Cambridge,Mass.), 164, 2016
3RFZ
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BU of 3rfz by Molmil
Crystal structure of the FimD usher bound to its cognate FimC:FimH substrate
Descriptor: Chaperone protein fimC, Outer membrane usher protein, type 1 fimbrial synthesis, ...
Authors:Phan, G, Remaut, H, Lebedev, A, Geibel, S, Waksman, G.
Deposit date:2011-04-07
Release date:2011-06-01
Last modified:2012-03-28
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Crystal structure of the FimD usher bound to its cognate FimC-FimH substrate.
Nature, 474, 2011
2YPW
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BU of 2ypw by Molmil
Atomic model for the N-terminus of TraO fitted in the full-length structure of the bacterial pKM101 type IV secretion system core complex
Descriptor: TRAO
Authors:Rivera-Calzada, A, Fronzes, R, Savva, C.G, Chandran, V, Lian, P.W, Laeremans, T, Pardon, E, Steyaert, J, Remaut, H, Waksman, G, Orlova, E.V.
Deposit date:2012-11-02
Release date:2013-04-03
Last modified:2017-08-23
Method:ELECTRON MICROSCOPY (12.4 Å)
Cite:Structure of a Bacterial Type Iv Secretion Core Complex at Subnanometre Resolution.
Embo J., 32, 2013
2W07
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BU of 2w07 by Molmil
Structural determinants of polymerization reactivity of the P pilus adaptor subunit PapF
Descriptor: CHAPERONE PROTEIN PAPD, MINOR PILIN SUBUNIT PAPF, SULFATE ION
Authors:Verger, D, Rose, R.J, Paci, E, Costakes, G, Daviter, T, Hultgren, S, Remaut, H, Ashcroft, A.E, Radford, S.E, Waksman, G.
Deposit date:2008-08-12
Release date:2008-11-25
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structural Determinants of Polymerization Reactivity of the P Pilus Adaptor Subunit Papf.
Structure, 16, 2008
2XG4
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BU of 2xg4 by Molmil
E. coli P pilus chaperone-subunit complex PapD-PapH bound to pilus biogenesis inhibitor, pilicide 2c
Descriptor: (3R)-8-CYCLOPROPYL-6-(MORPHOLIN-4-YLMETHYL)-7-(1-NAPHTHYLMETHYL)-5-OXO-2,3-DIHYDRO-5H-[1,3]THIAZOLO[3,2-A]PYRIDINE-3-CARBOXYLIC ACID, CHAPERONE PROTEIN PAPD, COBALT (II) ION, ...
Authors:Remaut, H, Phan, G, Buelens, F, Chorell, E, Pinkner, J.S, Edvinsson, S, Almqvist, F, Hultgren, S.J, Waksman, G.
Deposit date:2010-05-30
Release date:2010-07-14
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Design and Synthesis of C-2 Substituted Thiazolo and Dihydrothiazolo Ring-Fused 2-Pyridones: Pilicides with Increased Antivirulence Activity.
J.Med.Chem., 53, 2010
2XG5
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BU of 2xg5 by Molmil
E. coli P pilus chaperone-subunit complex PapD-PapH bound to pilus biogenesis inhibitor, pilicide 5d
Descriptor: (2R)-2-[5-CYCLOPROPYL-6-(HYDROXYSULFANYL)-4-(NAPHTHALEN-1-YLMETHYL)-2-OXOPYRIDIN-1(2H)-YL]-3-PHENYLPROPANOIC ACID, (2R,3R)-8-CYCLOPROPYL-7-(NAPHTHALEN-1-YLMETHYL)-5-OXO-2-PHENYL-2,3-DIHYDRO-5H-[1,3]THIAZOLO[3,2-A]PYRIDINE-3-CARBOXYLIC ACID, CHAPERONE PROTEIN PAPD, ...
Authors:Remaut, H, Phan, G, Buelens, F, Chorell, E, Pinkner, J.S, Edvinsson, S, Almqvist, F, Hultgren, S.J, Waksman, G.
Deposit date:2010-05-30
Release date:2010-07-14
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2 Å)
Cite:Design and Synthesis of C-2 Substituted Thiazolo and Dihydrothiazolo Ring-Fused 2-Pyridones: Pilicides with Increased Antivirulence Activity.
J.Med.Chem., 53, 2010
3U4K
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BU of 3u4k by Molmil
Crystal structure of the receptor binding domain of plasmid-born adhesin MrkD1P of Klebsiella pneumoniae
Descriptor: Fimbria adhesin protein
Authors:Rego, A.T, Waksman, G.
Deposit date:2011-10-09
Release date:2012-09-26
Last modified:2013-07-24
Method:X-RAY DIFFRACTION (3 Å)
Cite:Crystal structure of the MrkD1P receptor binding domain of Klebsiella pneumoniae and identification of the human collagen V binding interface.
Mol.Microbiol., 86, 2012
3ZBJ
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BU of 3zbj by Molmil
Fitting results in the I-layer of the subnanometer structure of the bacterial pKM101 type IV secretion system core complex digested with elastase
Descriptor: TRAO PROTEIN
Authors:Rivera-Calzada, A, Fronzes, R, Savva, C.G, Chandran, V, Lian, P.W, Laeremans, T, Pardon, E, Steyaert, J, Remaut, H, Waksman, G, Orlova, E.V.
Deposit date:2012-11-10
Release date:2013-04-03
Last modified:2017-08-30
Method:ELECTRON MICROSCOPY (8.5 Å)
Cite:Structure of a Bacterial Type Iv Secretion Core Complex at Subnanometre Resolution.
Embo J., 32, 2013
2BHV
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BU of 2bhv by Molmil
Structure of ComB10 of the Com Type IV secretion system of Helicobacter pylori
Descriptor: COMB10
Authors:Terradot, L, Oomen, C, Bayliss, R, Leonard, G, Waksman, G.
Deposit date:2005-01-18
Release date:2005-03-16
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (3 Å)
Cite:Structures of Two Core Subunits of the Bacterial Type Iv Secretion System, Virb8 from Brucella Suis and Comb10 from Helicobacter Pylori
Proc.Natl.Acad.Sci.USA, 102, 2005
5NNY
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BU of 5nny by Molmil
Crystal structure of the phosphatase domain from the Legionella effector WipB
Descriptor: WipB
Authors:Pinotsis, N, Waksman, G, Prevost, M.S.
Deposit date:2017-04-10
Release date:2017-09-06
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:The Legionella effector WipB is a translocated Ser/Thr phosphatase that targets the host lysosomal nutrient sensing machinery.
Sci Rep, 7, 2017
2GR8
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BU of 2gr8 by Molmil
Hia 1022-1098
Descriptor: Adhesin
Authors:Meng, G, Waksman, G.
Deposit date:2006-04-23
Release date:2006-05-23
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structure of the outer membrane translocator domain of the Haemophilus influenzae Hia trimeric autotransporter.
Embo J., 25, 2006
2GR7
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BU of 2gr7 by Molmil
Hia 992-1098
Descriptor: (HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE, Adhesin
Authors:Meng, G, Waksman, G.
Deposit date:2006-04-23
Release date:2006-05-23
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structure of the outer membrane translocator domain of the Haemophilus influenzae Hia trimeric autotransporter.
Embo J., 25, 2006
2BHM
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BU of 2bhm by Molmil
Crystal structure of VirB8 from Brucella suis
Descriptor: TYPE IV SECRETION SYSTEM PROTEIN VIRB8
Authors:Bayliss, R, Baron, C, Waksman, G.
Deposit date:2005-01-14
Release date:2005-03-16
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structures of Two Core Subunits of the Bacterial Type Iv Secretion System, Virb8 from Brucella Suis and Comb10 from Helicobacter Pylori
Proc.Natl.Acad.Sci.USA, 102, 2005
3EMI
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BU of 3emi by Molmil
Crystal structure of Hia 307-422 non-adhesive domain
Descriptor: Hia (Adhesin)
Authors:Meng, G, Waksman, G.
Deposit date:2008-09-24
Release date:2008-11-04
Last modified:2021-11-10
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Repetitive Architecture of the Haemophilus influenzae Hia Trimeric Autotransporter
J.Mol.Biol., 384, 2008
3EMO
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BU of 3emo by Molmil
Crystal structure of transmembrane Hia 973-1098
Descriptor: Hia (Adhesin)
Authors:Meng, G, Waksman, G.
Deposit date:2008-09-24
Release date:2008-11-04
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (3 Å)
Cite:Repetitive Architecture of the Haemophilus influenzae Hia Trimeric Autotransporter
J.Mol.Biol., 384, 2008
3EMF
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BU of 3emf by Molmil
Crystal structure of Haemophilus influenzae HiaBD2
Descriptor: Hia (Adhesin)
Authors:Meng, G, Waksman, G.
Deposit date:2008-09-24
Release date:2008-11-04
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2 Å)
Cite:Repetitive Architecture of the Haemophilus influenzae Hia Trimeric Autotransporter
J.Mol.Biol., 384, 2008
5N8O
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BU of 5n8o by Molmil
Cryo EM structure of the conjugative relaxase TraI of the F/R1 plasmid system
Descriptor: DNA (5'-D(P*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*T)-3'), DNA helicase I
Authors:Ilangovan, A, Zanetti, G, Waksman, G.
Deposit date:2017-02-23
Release date:2017-05-03
Last modified:2020-11-18
Method:ELECTRON MICROSCOPY (3.9 Å)
Cite:Cryo-EM Structure of a Relaxase Reveals the Molecular Basis of DNA Unwinding during Bacterial Conjugation
Cell, 169, 2017
7OVB
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BU of 7ovb by Molmil
L. pneumophila Type IV Coupling Complex (T4CC) with density for DotY N-terminal and middle domains
Descriptor: DotY, DotZ, IcmJ (DotN), ...
Authors:Mace, K, Meir, A, Lukoyanova, N, Waksman, G.
Deposit date:2021-06-14
Release date:2021-12-01
Last modified:2022-02-23
Method:ELECTRON MICROSCOPY (3.61 Å)
Cite:Proteins DotY and DotZ modulate the dynamics and localization of the type IVB coupling complex of Legionella pneumophila.
Mol.Microbiol., 117, 2022
2NMT
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BU of 2nmt by Molmil
MYRISTOYL-COA:PROTEIN N-MYRISTOYLTRANSFERASE BOUND TO MYRISTOYL-COA AND PEPTIDE ANALOGS
Descriptor: GLYCEROL, MYRISTOYL-COA:PROTEIN N-MYRISTOYLTRANSFERASE, S-(2-OXO)PENTADECYLCOA, ...
Authors:Fuetterer, K, Bhatnagar, R.S, Waksman, G.
Deposit date:1998-07-14
Release date:1999-01-06
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Structure of N-myristoyltransferase with bound myristoylCoA and peptide substrate analogs.
Nat.Struct.Biol., 5, 1998
2OFQ
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BU of 2ofq by Molmil
NMR Solution Structure of a complex between the VirB9/VirB7 interaction domains of the pKM101 type IV secretion system
Descriptor: TraN, TraO
Authors:Harris, R, Bayliss, R, Driscoll, P.C, Waksman, G.
Deposit date:2007-01-04
Release date:2007-01-23
Last modified:2023-12-27
Method:SOLUTION NMR
Cite:NMR structure of a complex between the VirB9/VirB7 interaction domains of the pKM101 type IV secretion system
Proc.Natl.Acad.Sci.Usa, 104, 2007
2PT7
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BU of 2pt7 by Molmil
Crystal structure of Cag VirB11 (HP0525) and an inhibitory protein (HP1451)
Descriptor: Cag-alfa, Hypothetical protein
Authors:Hare, S, Fischer, W, Williams, R, Terradot, L, Bayliss, R, Haas, R, Waksman, G.
Deposit date:2007-05-08
Release date:2007-11-13
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Identification, structure and mode of action of a new regulator of the Helicobacter pylori HP0525 ATPase.
Embo J., 26, 2007
2THF
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BU of 2thf by Molmil
STRUCTURE OF HUMAN ALPHA-THROMBIN Y225F MUTANT BOUND TO D-PHE-PRO-ARG-CHLOROMETHYLKETONE
Descriptor: D-phenylalanyl-N-[(2S,3S)-6-{[amino(iminio)methyl]amino}-1-chloro-2-hydroxyhexan-3-yl]-L-prolinamide, SODIUM ION, THROMBIN HEAVY CHAIN, ...
Authors:Caccia, S, Futterer, K, Di Cera, E, Waksman, G.
Deposit date:1999-01-26
Release date:1999-03-07
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Unexpected crucial role of residue 225 in serine proteases.
Proc.Natl.Acad.Sci.USA, 96, 1999
6QCM
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BU of 6qcm by Molmil
Cryo em structure of the Listeria stressosome
Descriptor: RsbR protein, RsbR protein,RsbR protein, RsbS protein
Authors:Williams, A.H, Redzej, A, Waksman, G, Cossart, P.
Deposit date:2018-12-28
Release date:2019-08-21
Method:ELECTRON MICROSCOPY (4.21 Å)
Cite:The cryo-electron microscopy supramolecular structure of the bacterial stressosome unveils its mechanism of activation.
Nat Commun, 10, 2019

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