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2D5M
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BU of 2d5m by Molmil
Flavoredoxin of Desulfovibrio vulgaris (Miyazaki F)
分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, FLAVIN MONONUCLEOTIDE, ZINC ION, ...
著者Ueda, Y, Shibata, N, Higuchi, Y.
登録日2005-11-02
公開日2006-11-21
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.05 Å)
主引用文献Flavoredoxin of Desulfovibrio vulgaris (Miyazaki F)
To be Published
1WVW
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BU of 1wvw by Molmil
Crystal structures of kinase domain of DAP kinase in complex with small molecular inhibitors
分子名称: Death-associated protein kinase 1
著者Ueda, Y, Ogata, H, Yamakawa, A, Higuchi, Y.
登録日2004-12-27
公開日2006-04-11
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Crystal structure of kinase domain of DAP kinase
To be Published
1WVX
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BU of 1wvx by Molmil
Crystal structures of kinase domain of DAP kinase in complex with small molecular inhibitors
分子名称: 6-(3-AMINOPROPYL)-4,9-DIMETHYLPYRROLO[3,4-C]CARBAZOLE-1,3(2H,6H)-DIONE, Death-associated protein kinase 1
著者Ueda, Y, Ogata, H, Yamakawa, A, Higuchi, Y.
登録日2004-12-27
公開日2006-04-11
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Complex structure of kinase domain of DAP kinase with BDB402
To be Published
1WVY
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BU of 1wvy by Molmil
Crystal structures of kinase domain of DAP kinase in complex with small molecular inhibitors
分子名称: Death-associated protein kinase 1, STAUROSPORINE
著者Ueda, Y, Ogata, H, Yamakawa, A, Higuchi, Y.
登録日2004-12-27
公開日2006-04-11
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Complex structure of kinase domain of DAP kinase with Staurosporine
To be Published
1WSP
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BU of 1wsp by Molmil
Crystal structure of axin dix domain
分子名称: Axin 1 protein, BENZOIC ACID, MERCURY (II) ION
著者Shibata, N, Hanamura, T, Yamamoto, R, Ueda, Y, Yamamoto, H, Kikuchi, A, Higuchi, Y.
登録日2004-11-08
公開日2006-02-14
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Crystal structure of axin dix domain
to be published
1VTU
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BU of 1vtu by Molmil
Structural characteristics of enantiomorphic DNA: Crystal analysis of racemates of the D(CGCGCG) duplex
分子名称: DNA (5'-D(*CP*GP*CP*GP*CP*G)-3')
著者Doi, M, Inoue, M, Tomoo, K, Ishida, T, Ueda, Y, Akagi, M, Urata, H.
登録日1994-08-29
公開日2011-07-13
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structural Characteristics of Enantiomorphic DNA: Crystal Analysis of Racemates of the d(CGCGCG) Duplex
J.Am.Chem.Soc., 115, 1993
3VV2
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BU of 3vv2 by Molmil
Crystal structure of complex form between S324A-subtilisin and mutant Tkpro
分子名称: CALCIUM ION, CHLORIDE ION, PROPEPTIDE from Tk-subtilisin, ...
著者Uehara, R, Ueda, Y, You, D.J, Takano, K, Koga, Y, Kanaya, S.
登録日2012-07-12
公開日2013-03-06
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.83 Å)
主引用文献Accelerated maturation of Tk-subtilisin by a Leu Pro mutation at the C-terminus of the propeptide, which reduces the binding of the propeptide to Tk-subtilisin
Febs J., 280, 2013
5AWE
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BU of 5awe by Molmil
Crystal structure of a hypothetical protein, TTHA0829 from Thermus thermophilus HB8, composed of cystathionine-beta-synthase (CBS) and aspartate-kinase chorismate-mutase tyrA (ACT) domains
分子名称: Putative acetoin utilization protein, acetoin dehydrogenase
著者Nakabayashi, M, Shibata, N, Kanagawa, M, Nakagawa, N, Kuramitsu, S, Higuchi, Y.
登録日2015-07-03
公開日2016-05-18
最終更新日2020-02-26
実験手法X-RAY DIFFRACTION (2.45 Å)
主引用文献Crystal structure of a hypothetical protein, TTHA0829 from Thermus thermophilus HB8, composed of cystathionine-beta-synthase (CBS) and aspartate-kinase chorismate-mutase tyrA (ACT) domains.
Extremophiles, 20, 2016
2D5G
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BU of 2d5g by Molmil
Structure of ubiquitin fold protein R767E mutant
分子名称: Axin-1, MERCURY (II) ION
著者Shibata, N, Higuchi, Y.
登録日2005-11-01
公開日2006-11-01
最終更新日2021-11-10
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献Structure of ubiquitin fold protein R767E mutant
to be published
2D4R
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BU of 2d4r by Molmil
Crystal structure of TTHA0849 from Thermus thermophilus HB8
分子名称: SULFATE ION, hypothetical protein TTHA0849
著者Nakabayashi, M, Shibata, N, Kuramitsu, S, Higuchi, Y, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2005-10-23
公開日2005-12-13
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Structure of a conserved hypothetical protein, TTHA0849 from Thermus thermophilus HB8, at 2.4 A resolution: a putative member of the StAR-related lipid-transfer (START) domain superfamily.
Acta Crystallogr.,Sect.F, 61, 2005
3MOD
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BU of 3mod by Molmil
Crystal structure of the neutralizing HIV antibody 2F5 Fab fragment (recombinantly produced IgG) with 11 aa gp41 MPER-derived peptide
分子名称: ANTI-HIV-1 ANTIBODY 2F5 HEAVY CHAIN, ANTI-HIV-1 ANTIBODY 2F5 LIGHT CHAIN, gp41 MPER-derived peptide
著者Nicely, N.I, Dennison, S.M, Kelsoe, G, Liao, H.-X, Alam, S.M, Haynes, B.F.
登録日2010-04-22
公開日2010-11-17
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Crystal Structure of a Non-Neutralizing HIV-1 gp41 Envelope Antibody Demonstrates Neutralization Mechanism of gp41 Antibodies
To be Published
3MO1
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BU of 3mo1 by Molmil
Crystal structure of the non-neutralizing HIV antibody 13H11 Fab fragment
分子名称: ACETATE ION, ANTI-HIV-1 ANTIBODY 13H11 HEAVY CHAIN, ANTI-HIV-1 ANTIBODY 13H11 LIGHT CHAIN, ...
著者Nicely, N.I, Dennison, S.M, Kelsoe, G, Liao, H.-X, Alam, S.M, Haynes, B.F.
登録日2010-04-22
公開日2010-11-17
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Crystal Structure of a Non-Neutralizing HIV-1 gp41 Envelope Antibody Demonstrates Neutralization Mechanism of gp41 Antibodies
To be Published
3MNZ
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BU of 3mnz by Molmil
Crystal structure of the non-neutralizing HIV antibody 13H11 Fab fragment with a gp41 MPER-derived peptide bearing Ala substitutions in a helical conformation
分子名称: ANTI-HIV-1 ANTIBODY 13H11 HEAVY CHAIN, ANTI-HIV-1 ANTIBODY 13H11 LIGHT CHAIN, SODIUM ION, ...
著者Nicely, N.I, Dennison, S.M, Kelsoe, G, Liao, H.-X, Alam, S.M, Haynes, B.F.
登録日2010-04-22
公開日2010-11-17
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Crystal Structure of a Non-Neutralizing HIV-1 gp41 Envelope Antibody Demonstrates Neutralization Mechanism of gp41 Antibodies
To be Published
3MNW
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BU of 3mnw by Molmil
Crystal structure of the non-neutralizing HIV antibody 13H11 Fab fragment with a gp41 MPER-derived peptide in a helical conformation
分子名称: 1,2-ETHANEDIOL, ANTI-HIV-1 ANTIBODY 13H11 HEAVY CHAIN, ANTI-HIV-1 ANTIBODY 13H11 LIGHT CHAIN, ...
著者Nicely, N.I, Dennison, S.M, Kelsoe, G, Liao, H.-X, Alam, S.M, Haynes, B.F.
登録日2010-04-22
公開日2010-11-17
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Crystal Structure of a Non-Neutralizing HIV-1 gp41 Envelope Antibody Demonstrates Neutralization Mechanism of gp41 Antibodies
To be Published
3MOB
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BU of 3mob by Molmil
Crystal structure of the neutralizing HIV antibody 2F5 Fab fragment (recombinantly produced Fab) with 11 aa gp41 MPER-derived peptide
分子名称: ANTI-HIV-1 ANTIBODY 2F5 HEAVY CHAIN, ANTI-HIV-1 ANTIBODY 2F5 LIGHT CHAIN, gp41 MPER-derived peptide
著者Nicely, N.I, Dennison, S.M, Kelsoe, G, Liao, H.-X, Alam, S.M, Haynes, B.F.
登録日2010-04-22
公開日2010-11-17
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Crystal Structure of a Non-Neutralizing HIV-1 gp41 Envelope Antibody Demonstrates Neutralization Mechanism of gp41 Antibodies
To be Published
3MNV
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BU of 3mnv by Molmil
Crystal structure of the non-neutralizing HIV antibody 13H11 Fab fragment
分子名称: 1,2-ETHANEDIOL, ANTI-HIV-1 ANTIBODY 13H11 HEAVY CHAIN, ANTI-HIV-1 ANTIBODY 13H11 LIGHT CHAIN, ...
著者Nicely, N.I, Dennison, S.M, Kelsoe, G, Liao, H.-X, Alam, S.M, Haynes, B.F.
登録日2010-04-22
公開日2010-11-17
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Crystal structure of a non-neutralizing antibody to the HIV-1 gp41 membrane-proximal external region.
Nat.Struct.Mol.Biol., 17, 2010
3MOA
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BU of 3moa by Molmil
Crystal structure of the neutralizing HIV antibody 2F5 Fab fragment (recombinantly produced Fab) with 17 aa gp41 MPER-derived peptide
分子名称: ANTI-HIV-1 ANTIBODY 2F5 HEAVY CHAIN, ANTI-HIV-1 ANTIBODY 2F5 LIGHT CHAIN, gp41 MPER-derived peptide
著者Nicely, N.I, Dennison, S.M, Kelsoe, G, Liao, H.-X, Alam, S.M, Haynes, B.F.
登録日2010-04-22
公開日2010-11-17
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Crystal Structure of a Non-Neutralizing HIV-1 gp41 Envelope Antibody Demonstrates Neutralization Mechanism of gp41 Antibodies
To be Published
5JZQ
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BU of 5jzq by Molmil
Ultrahigh-resolution centrosymmetric crystal structure of Z-DNA reveals massive presence of multiple conformations
分子名称: DNA (5'-D(*CP*GP*CP*GP*CP*G)-3'), MAGNESIUM ION
著者Drozdzal, P, Gilski, M, Jaskolski, M.
登録日2016-05-17
公開日2016-11-09
最終更新日2018-08-08
実験手法X-RAY DIFFRACTION (0.78 Å)
主引用文献Ultrahigh-resolution centrosymmetric crystal structure of Z-DNA reveals the massive presence of alternate conformations.
Acta Crystallogr D Struct Biol, 72, 2016
3W9F
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BU of 3w9f by Molmil
Crystal structure of the ankyrin repeat domain of chicken TRPV4 in complex with IP3
分子名称: D-MYO-INOSITOL-1,4,5-TRIPHOSPHATE, Vanilloid receptor-related osmotically activated channel protein
著者Itoh, Y, Hamada-nakahara, S, Suetsugu, S.
登録日2013-04-04
公開日2014-04-09
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献TRPV4 channel activity is modulated by direct interaction of the ankyrin domain to PI(4,5)P2
Nat Commun, 5, 2014
3W9G
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BU of 3w9g by Molmil
Crystal structure of the ankyrin repeat domain of chicken TRPV4
分子名称: Vanilloid receptor-related osmotically activated channel protein
著者Itoh, Y, Hamada-nakahara, S, Suetsugu, S.
登録日2013-04-04
公開日2014-04-09
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献TRPV4 channel activity is modulated by direct interaction of the ankyrin domain to PI(4,5)P2
Nat Commun, 5, 2014
7XSH
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BU of 7xsh by Molmil
Crystal structure of ClAgl29B bound with L-glucose
分子名称: Alpha-L-fucosidase, CITRIC ACID, DI(HYDROXYETHYL)ETHER, ...
著者Shishiuchi, R, Kang, H, Tagami, T, Okuyama, M.
登録日2022-05-14
公開日2023-01-18
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.708 Å)
主引用文献Discovery of alpha-l-Glucosidase Raises the Possibility of alpha-l-Glucosides in Nature.
Acs Omega, 7, 2022
7XSF
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BU of 7xsf by Molmil
Crystal structure of ClAgl29A
分子名称: Alpha-L-fucosidase, DI(HYDROXYETHYL)ETHER, GLYCEROL, ...
著者Shishiuchi, R, Kang, H, Tagami, T, Okuyama, M.
登録日2022-05-14
公開日2023-01-18
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.006 Å)
主引用文献Discovery of alpha-l-Glucosidase Raises the Possibility of alpha-l-Glucosides in Nature.
Acs Omega, 7, 2022
7XSG
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BU of 7xsg by Molmil
Crystal structure of ClAgl29B
分子名称: Alpha-L-fucosidase, CITRIC ACID, DI(HYDROXYETHYL)ETHER, ...
著者Shishiuchi, R, Kang, H, Tagami, T, Okuyama, M.
登録日2022-05-14
公開日2023-01-18
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.609 Å)
主引用文献Discovery of alpha-l-Glucosidase Raises the Possibility of alpha-l-Glucosides in Nature.
Acs Omega, 7, 2022
5ZOH
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BU of 5zoh by Molmil
Crystal structure of a far-red light-absorbing form of AnPixJg2_BV4 in complex with biliverdin
分子名称: BILIVERDINE IX ALPHA, GLYCEROL, Methyl-accepting chemotaxis protein
著者Miyazaki, T, Fushimi, K, Narikawa, R.
登録日2018-04-13
公開日2019-04-17
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Rational conversion of chromophore selectivity of cyanobacteriochromes to accept mammalian intrinsic biliverdin.
Proc. Natl. Acad. Sci. U.S.A., 116, 2019

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