1JRG
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![BU of 1jrg by Molmil](/molmil-images/mine/1jrg) | Crystal Structure of the R3 form of Pectate Lyase A, Erwinia chrysanthemi | Descriptor: | Pectate lyase, SULFATE ION | Authors: | Thomas, L.M, Doan, C, Oliver, R.L, Yoder, M.D. | Deposit date: | 2001-08-13 | Release date: | 2002-06-19 | Last modified: | 2024-04-03 | Method: | X-RAY DIFFRACTION (2.1 Å) | Cite: | Structure of pectate lyase A: comparison to other isoforms. Acta Crystallogr.,Sect.D, 58, 2002
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1JTA
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![BU of 1jta by Molmil](/molmil-images/mine/1jta) | Crystal Structure of Pectate Lyase A (C2 form) | Descriptor: | SULFATE ION, pectate lyase A | Authors: | Thomas, L.M, Doan, C.N, Oliver, R.L, Yoder, M.D. | Deposit date: | 2001-08-20 | Release date: | 2002-06-19 | Last modified: | 2024-04-03 | Method: | X-RAY DIFFRACTION (1.8 Å) | Cite: | Structure of pectate lyase A: comparison to other isoforms. Acta Crystallogr.,Sect.D, 58, 2002
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4GKV
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![BU of 4gkv by Molmil](/molmil-images/mine/4gkv) | Structure of Escherichia coli AdhP (ethanol-inducible dehydrogenase) with bound NAD | Descriptor: | Alcohol dehydrogenase, propanol-preferring, GLYCEROL, ... | Authors: | Sims, P.A, Thomas, L.M, Harper, A.R, Miner, W.A, Ajufo, H.O, Branscrum, K.M, Kao, L. | Deposit date: | 2012-08-13 | Release date: | 2013-07-10 | Last modified: | 2024-02-28 | Method: | X-RAY DIFFRACTION (2.008 Å) | Cite: | Structure of Escherichia coli AdhP (ethanol-inducible dehydrogenase) with bound NAD. Acta Crystallogr.,Sect.F, 69, 2013
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6NVA
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![BU of 6nva by Molmil](/molmil-images/mine/6nva) | |
7SUB
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![BU of 7sub by Molmil](/molmil-images/mine/7sub) | 3-oxoacyl-ACP reductase FabG | Descriptor: | 3-oxoacyl-reductase, GLYCEROL | Authors: | Thomas, L.M, Karr, E.A, Dinh, D.M. | Deposit date: | 2021-11-16 | Release date: | 2022-12-07 | Last modified: | 2023-10-25 | Method: | X-RAY DIFFRACTION (1.78 Å) | Cite: | Crystal structure of a putative 3-hydroxypimelyl-CoA dehydrogenase, Hcd1, from Syntrophus aciditrophicus strain SB at 1.78 A resolution Acta Crystallogr.,Sect.F, 79, 2023
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7LNU
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![BU of 7lnu by Molmil](/molmil-images/mine/7lnu) | Ternary complex of the Isopentenyl Phosphate Kinase from Candidatus methanomethylophilus alvus bound to isopentenyl monophosphate and ATP | Descriptor: | 3-METHYLBUT-3-ENYL TRIHYDROGEN DIPHOSPHATE, ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, ... | Authors: | Thomas, L.M, Singh, S, Scull, E.M, Bourne, C.R. | Deposit date: | 2021-02-08 | Release date: | 2021-12-22 | Last modified: | 2024-04-03 | Method: | X-RAY DIFFRACTION (2.5 Å) | Cite: | Molecular Basis for the Substrate Promiscuity of Isopentenyl Phosphate Kinase from Candidatus methanomethylophilus alvus . Acs Chem.Biol., 17, 2022
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7LNW
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![BU of 7lnw by Molmil](/molmil-images/mine/7lnw) | |
7LNX
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![BU of 7lnx by Molmil](/molmil-images/mine/7lnx) | I146A mutant of the isopentenyl phosphate kinase from Candidatus methanomethylophilus alvus | Descriptor: | (2E)-3-methylhept-2-en-1-yl dihydrogen phosphate, (2Z)-3-methylhept-2-en-1-yl trihydrogen diphosphate, ADENOSINE-5'-DIPHOSPHATE, ... | Authors: | Thomas, L.M, Singh, S, Johnson, B.P. | Deposit date: | 2021-02-08 | Release date: | 2021-12-22 | Last modified: | 2024-05-22 | Method: | X-RAY DIFFRACTION (2.3 Å) | Cite: | Molecular Basis for the Substrate Promiscuity of Isopentenyl Phosphate Kinase from Candidatus methanomethylophilus alvus . Acs Chem.Biol., 17, 2022
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7LNT
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![BU of 7lnt by Molmil](/molmil-images/mine/7lnt) | Ternary complex of the Isopentenyl Phosphate Kinase from Candidatus methanomethylophilus alvus bound to benzyl monophosphate and ATP | Descriptor: | (phenylmethyl) dihydrogen phosphate, ADENOSINE-5'-DIPHOSPHATE, GLYCEROL, ... | Authors: | Thomas, L.M, Singh, S, Scull, E.M, Bourne, C.R. | Deposit date: | 2021-02-08 | Release date: | 2021-12-22 | Last modified: | 2024-04-03 | Method: | X-RAY DIFFRACTION (2.35 Å) | Cite: | Molecular Basis for the Substrate Promiscuity of Isopentenyl Phosphate Kinase from Candidatus methanomethylophilus alvus . Acs Chem.Biol., 17, 2022
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7LNV
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![BU of 7lnv by Molmil](/molmil-images/mine/7lnv) | Apo Structure of Isopentenyl Phosphate Kinase from Candidatus methanomethylophilus alvus | Descriptor: | GLYCEROL, Isopentenyl phosphate kinase, MALONATE ION | Authors: | Thomas, L.M, Singh, S, Scull, E.M, Bourne, C.R. | Deposit date: | 2021-02-08 | Release date: | 2021-12-29 | Last modified: | 2023-10-18 | Method: | X-RAY DIFFRACTION (2.2 Å) | Cite: | Molecular Basis for the Substrate Promiscuity of Isopentenyl Phosphate Kinase from Candidatus methanomethylophilus alvus . Acs Chem.Biol., 17, 2022
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3O2L
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![BU of 3o2l by Molmil](/molmil-images/mine/3o2l) | |
7N9D
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![BU of 7n9d by Molmil](/molmil-images/mine/7n9d) | |
7JJQ
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![BU of 7jjq by Molmil](/molmil-images/mine/7jjq) | Human Hemoglobin in Complex with Nitrosoamphetamine | Descriptor: | (2R)-N-hydroxy-1-phenylpropan-2-amine, GLYCEROL, Hemoglobin subunit alpha, ... | Authors: | Powell, S.M, Thomas, L.M, Richter-Addo, G.B. | Deposit date: | 2020-07-27 | Release date: | 2020-11-11 | Last modified: | 2023-10-18 | Method: | X-RAY DIFFRACTION (2.15 Å) | Cite: | The nitrosoamphetamine metabolite is accommodated in the active site of human hemoglobin: Spectroscopy and crystal structure. J.Inorg.Biochem., 213, 2020
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5ILE
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![BU of 5ile by Molmil](/molmil-images/mine/5ile) | H64A sperm whale myoglobin with a Fe-tolyl moiety | Descriptor: | Myoglobin, SULFATE ION, [3,3'-(7,12-diethenyl-3,8,13,17-tetramethylporphyrin-2,18-diyl-kappa~4~N~21~,N~22~,N~23~,N~24~)di(propanoato)(2-)](3-methylphenyl)iron | Authors: | Wang, B, Thomas, L.M, Richter-Addo, G.B. | Deposit date: | 2016-03-03 | Release date: | 2016-09-21 | Last modified: | 2023-09-27 | Method: | X-RAY DIFFRACTION (1.77 Å) | Cite: | Organometallic myoglobins: Formation of Fe-carbon bonds and distal pocket effects on aryl ligand conformations. J. Inorg. Biochem., 164, 2016
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5ILP
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![BU of 5ilp by Molmil](/molmil-images/mine/5ilp) | H64Q sperm whale myoglobin with a Fe-tolyl moiety | Descriptor: | GLYCEROL, Myoglobin, SULFATE ION, ... | Authors: | Wang, B, Thomas, L.M, Richter-Addo, G.B. | Deposit date: | 2016-03-04 | Release date: | 2016-09-21 | Last modified: | 2023-09-27 | Method: | X-RAY DIFFRACTION (1.88 Å) | Cite: | Organometallic myoglobins: Formation of Fe-carbon bonds and distal pocket effects on aryl ligand conformations. J. Inorg. Biochem., 164, 2016
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5VZQ
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![BU of 5vzq by Molmil](/molmil-images/mine/5vzq) | Sperm whale myoglobin V68A/I107Y with nitric oxide | Descriptor: | Myoglobin, NITRIC OXIDE, NITRITE ION, ... | Authors: | Wang, B, Thomas, L.M, Richter-Addo, G.B. | Deposit date: | 2017-05-29 | Release date: | 2018-06-06 | Last modified: | 2023-10-04 | Method: | X-RAY DIFFRACTION (1.79 Å) | Cite: | Nitrosyl Myoglobins and Their Nitrite Precursors: Crystal Structural and Quantum Mechanics and Molecular Mechanics Theoretical Investigations of Preferred Fe -NO Ligand Orientations in Myoglobin Distal Pockets. Biochemistry, 57, 2018
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5VZO
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![BU of 5vzo by Molmil](/molmil-images/mine/5vzo) | Sperm whale myoglobin H64A with nitric oxide | Descriptor: | GLYCEROL, Myoglobin, NITRIC OXIDE, ... | Authors: | Wang, B, Thomas, L.M, Richter-Addo, G.B. | Deposit date: | 2017-05-29 | Release date: | 2018-06-06 | Last modified: | 2024-03-13 | Method: | X-RAY DIFFRACTION (1.78 Å) | Cite: | Nitrosyl Myoglobins and Their Nitrite Precursors: Crystal Structural and Quantum Mechanics and Molecular Mechanics Theoretical Investigations of Preferred Fe -NO Ligand Orientations in Myoglobin Distal Pockets. Biochemistry, 57, 2018
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5VZP
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![BU of 5vzp by Molmil](/molmil-images/mine/5vzp) | Sperm whale myoglobin H64Q with nitric oxide | Descriptor: | GLYCEROL, Myoglobin, NITRIC OXIDE, ... | Authors: | Wang, B, Thomas, L.M, Richter-Addo, G.B. | Deposit date: | 2017-05-29 | Release date: | 2018-06-06 | Last modified: | 2023-10-04 | Method: | X-RAY DIFFRACTION (1.78 Å) | Cite: | Nitrosyl Myoglobins and Their Nitrite Precursors: Crystal Structural and Quantum Mechanics and Molecular Mechanics Theoretical Investigations of Preferred Fe -NO Ligand Orientations in Myoglobin Distal Pockets. Biochemistry, 57, 2018
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8U0N
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![BU of 8u0n by Molmil](/molmil-images/mine/8u0n) | Crystal structure of isopentenyl phosphate kinase from Thermococcus paralvinellae bound to 2-cyclopentylideneethyl monophosphate and ADP | Descriptor: | 2-cyclopentylideneethyl dihydrogen phosphate, ADENOSINE-5'-DIPHOSPHATE, Isopentenyl phosphate kinase | Authors: | Singh, S, Thomas, L.M, Johnson, B.P, Brown, S. | Deposit date: | 2023-08-29 | Release date: | 2024-02-21 | Last modified: | 2024-06-12 | Method: | X-RAY DIFFRACTION (2.5 Å) | Cite: | Ternary complexes of isopentenyl phosphate kinase from Thermococcus paralvinellae reveal molecular determinants of non-natural substrate specificity. Proteins, 92, 2024
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8U0L
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![BU of 8u0l by Molmil](/molmil-images/mine/8u0l) | Crystal structure of isopentenyl phosphate kinase from Thermococcus paralvinellae bound to (E)-But-2-en-1-yl monophosphate and ADP | Descriptor: | (2E)-but-2-en-1-yl dihydrogen phosphate, ADENOSINE-5'-DIPHOSPHATE, Isopentenyl phosphate kinase | Authors: | Singh, S, Thomas, L.M, Johnson, B.P, Brown, S. | Deposit date: | 2023-08-29 | Release date: | 2024-02-21 | Last modified: | 2024-06-12 | Method: | X-RAY DIFFRACTION (2.8 Å) | Cite: | Ternary complexes of isopentenyl phosphate kinase from Thermococcus paralvinellae reveal molecular determinants of non-natural substrate specificity. Proteins, 92, 2024
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8U0K
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![BU of 8u0k by Molmil](/molmil-images/mine/8u0k) | Crystal structure of isopentenyl phosphate kinase from Thermococcus paralvinellae bound to DMAP and ADP | Descriptor: | ADENOSINE-5'-DIPHOSPHATE, Dimethylallyl monophosphate, Isopentenyl phosphate kinase | Authors: | Singh, S, Thomas, L.M, Johnson, B.P, Brown, S. | Deposit date: | 2023-08-29 | Release date: | 2024-02-21 | Last modified: | 2024-06-12 | Method: | X-RAY DIFFRACTION (2.5 Å) | Cite: | Ternary complexes of isopentenyl phosphate kinase from Thermococcus paralvinellae reveal molecular determinants of non-natural substrate specificity. Proteins, 92, 2024
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8U0M
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![BU of 8u0m by Molmil](/molmil-images/mine/8u0m) | Crystal structure of isopentenyl phosphate kinase from Thermococcus paralvinellae bound to (E)-2-methylbut-2-en-1-yl monophosphate and ATP | Descriptor: | (2E)-2-methylbut-2-en-1-yl dihydrogen phosphate, ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, ... | Authors: | Singh, S, Thomas, L.M, Johnson, B.P, Brown, S. | Deposit date: | 2023-08-29 | Release date: | 2024-02-21 | Last modified: | 2024-06-12 | Method: | X-RAY DIFFRACTION (2.54 Å) | Cite: | Ternary complexes of isopentenyl phosphate kinase from Thermococcus paralvinellae reveal molecular determinants of non-natural substrate specificity. Proteins, 92, 2024
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1Y66
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![BU of 1y66 by Molmil](/molmil-images/mine/1y66) | Dioxane contributes to the altered conformation and oligomerization state of a designed engrailed homeodomain variant | Descriptor: | 1,4-DIETHYLENE DIOXIDE, ACETIC ACID, CADMIUM ION, ... | Authors: | Hom, G.K, Lassila, J.K, Thomas, L.M, Mayo, S.L. | Deposit date: | 2004-12-03 | Release date: | 2005-03-15 | Last modified: | 2024-02-14 | Method: | X-RAY DIFFRACTION (1.65 Å) | Cite: | Dioxane contributes to the altered conformation and oligomerization state of a designed engrailed homeodomain variant. Protein Sci., 14, 2005
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1Z8L
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![BU of 1z8l by Molmil](/molmil-images/mine/1z8l) | Crystal structure of prostate-specific membrane antigen, a tumor marker and peptidase | Descriptor: | 2-acetamido-2-deoxy-alpha-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ... | Authors: | Davis, M.I, Bennett, M.J, Thomas, L.M, Bjorkman, P.J. | Deposit date: | 2005-03-30 | Release date: | 2005-04-19 | Last modified: | 2023-08-23 | Method: | X-RAY DIFFRACTION (3.5 Å) | Cite: | Crystal structure of prostate-specific membrane antigen, a tumor marker and peptidase Proc.Natl.Acad.Sci.USA, 102, 2005
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1YHT
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![BU of 1yht by Molmil](/molmil-images/mine/1yht) | Crystal structure analysis of Dispersin B | Descriptor: | ACETIC ACID, DspB, GLYCEROL | Authors: | Ramasubbu, N, Thomas, L.M, Ragunath, C, Kaplan, J.B. | Deposit date: | 2005-01-10 | Release date: | 2006-01-10 | Last modified: | 2024-02-14 | Method: | X-RAY DIFFRACTION (2 Å) | Cite: | Structural Analysis of Dispersin B, a Biofilm-releasing Glycoside Hydrolase from the Periodontopathogen Actinobacillus actinomycetemcomitans. J.Mol.Biol., 349, 2005
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