Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
4LZF
DownloadVisualize
BU of 4lzf by Molmil
A novel domain in the microcephaly protein CPAP suggests a role in centriole architecture
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, Centrosomal P4.1-associated protein, SCL-interrupting locus protein homolog, ...
Authors:Hatzopoulos, G.N, Erat, M.C, Cutts, E, Rogala, K, Slatter, L, Stansfeld, P.J, Vakonakis, I.
Deposit date:2013-07-31
Release date:2013-09-11
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.72 Å)
Cite:Structural analysis of the G-box domain of the microcephaly protein CPAP suggests a role in centriole architecture.
Structure, 21, 2013
7ZRM
DownloadVisualize
BU of 7zrm by Molmil
Cryo-EM map of the unphosphorylated KdpFABC complex in the E1-P_ADP conformation, under turnover conditions
Descriptor: ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, POTASSIUM ION, ...
Authors:Hielkema, L, Stock, C, Silberberg, J.M, Corey, R.A, Wunnicke, D, Dubach, V.R.A, Stansfeld, P.J, Haenelt, I, Paulino, C.
Deposit date:2022-05-04
Release date:2022-11-16
Method:ELECTRON MICROSCOPY (3.7 Å)
Cite:Inhibited KdpFABC transitions into an E1 off-cycle state.
Elife, 11, 2022
7ZRD
DownloadVisualize
BU of 7zrd by Molmil
Cryo-EM map of the WT KdpFABC complex in the E1-P tight conformation, stabilised with the inhibitor orthovanadate
Descriptor: CARDIOLIPIN, POTASSIUM ION, Potassium-transporting ATPase ATP-binding subunit, ...
Authors:Hielkema, L, Stock, C, Silberberg, J.M, Corey, R.A, Wunnicke, D, Stansfeld, P.J, Haenelt, I, Paulino, C.
Deposit date:2022-05-04
Release date:2022-11-16
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Inhibited KdpFABC transitions into an E1 off-cycle state.
Elife, 11, 2022
7ZRL
DownloadVisualize
BU of 7zrl by Molmil
Cryo-EM map of the unphosphorylated KdpFABC complex in the E2-P conformation, under turnover conditions
Descriptor: POTASSIUM ION, Potassium-transporting ATPase ATP-binding subunit, Potassium-transporting ATPase KdpC subunit, ...
Authors:Hielkema, L, Stock, C, Silberberg, J.M, Corey, R.A, Wunnicke, D, Dubach, V.R.A, Stansfeld, P.J, Haenelt, I, Paulino, C.
Deposit date:2022-05-04
Release date:2022-11-16
Method:ELECTRON MICROSCOPY (4 Å)
Cite:Inhibited KdpFABC transitions into an E1 off-cycle state.
Elife, 11, 2022
7ZRE
DownloadVisualize
BU of 7zre by Molmil
Cryo-EM map of the WT KdpFABC complex in the E1-P tight conformation, under turnover conditions
Descriptor: CARDIOLIPIN, POTASSIUM ION, Potassium-transporting ATPase ATP-binding subunit, ...
Authors:Hielkema, L, Stock, C, Silberberg, J.M, Corey, R.A, Wunnicke, D, Dubach, V.R.A, Stansfeld, P.J, Haenelt, I, Paulino, C.
Deposit date:2022-05-04
Release date:2022-11-16
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Inhibited KdpFABC transitions into an E1 off-cycle state.
Elife, 11, 2022
7ZRK
DownloadVisualize
BU of 7zrk by Molmil
Cryo-EM map of the WT KdpFABC complex in the E1-P_ADP conformation, under turnover conditions
Descriptor: ADENOSINE-5'-DIPHOSPHATE, CARDIOLIPIN, POTASSIUM ION, ...
Authors:Hielkema, L, Stock, C, Silberberg, J.M, Corey, R.A, Wunnicke, D, Dubach, V.R.A, Stansfeld, P.J, Haenelt, I, Paulino, C.
Deposit date:2022-05-04
Release date:2022-11-16
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Inhibited KdpFABC transitions into an E1 off-cycle state.
Elife, 11, 2022
7ZRH
DownloadVisualize
BU of 7zrh by Molmil
Cryo-EM structure of the KdpFABC complex in a nucleotide-free E1 conformation loaded with K+
Descriptor: CARDIOLIPIN, POTASSIUM ION, Potassium-transporting ATPase ATP-binding subunit, ...
Authors:Hielkema, L, Stock, C, Silberberg, J.M, Corey, R.A, Wunnicke, D, Stansfeld, P.J, Haenelt, I, Paulino, C.
Deposit date:2022-05-04
Release date:2022-11-16
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Inhibited KdpFABC transitions into an E1 off-cycle state.
Elife, 11, 2022
7ZRG
DownloadVisualize
BU of 7zrg by Molmil
Cryo-EM map of the WT KdpFABC complex in the E1_ATPearly conformation, under turnover conditions
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, CARDIOLIPIN, POTASSIUM ION, ...
Authors:Hielkema, L, Stock, C, Silberberg, J.M, Corey, R.A, Rheinberger, J, Wunnicke, D, Dubach, V.R.A, Stansfeld, P.J, Haenelt, I, Paulino, C.
Deposit date:2022-05-04
Release date:2022-11-16
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Inhibited KdpFABC transitions into an E1 off-cycle state.
Elife, 11, 2022
7ZRI
DownloadVisualize
BU of 7zri by Molmil
Cryo-EM structure of the KdpFABC complex in a nucleotide-free E1 conformation loaded with K+
Descriptor: CARDIOLIPIN, POTASSIUM ION, Potassium-transporting ATPase ATP-binding subunit, ...
Authors:Hielkema, L, Stock, C, Silberberg, J.M, Corey, R.A, Wunnicke, D, Stansfeld, P.J, Haenelt, I, Paulino, C.
Deposit date:2022-05-04
Release date:2022-11-16
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Inhibited KdpFABC transitions into an E1 off-cycle state.
Elife, 11, 2022
7ZRJ
DownloadVisualize
BU of 7zrj by Molmil
Cryo-EM structure of the KdpFABC complex in a nucleotide-free E1 conformation loaded with K+
Descriptor: CARDIOLIPIN, POTASSIUM ION, Potassium-transporting ATPase ATP-binding subunit, ...
Authors:Hielkema, L, Stock, C, Silberberg, J.M, Corey, R.A, Wunnicke, D, Stansfeld, P.J, Haenelt, I, Paulino, C.
Deposit date:2022-05-04
Release date:2022-11-16
Method:ELECTRON MICROSCOPY (3.7 Å)
Cite:Inhibited KdpFABC transitions into an E1 off-cycle state.
Elife, 11, 2022
7NNP
DownloadVisualize
BU of 7nnp by Molmil
Rb-loaded cryo-EM structure of the E1-ATP KdpFABC complex.
Descriptor: CARDIOLIPIN, PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER, Potassium-transporting ATPase ATP-binding subunit, ...
Authors:Silberberg, J.M, Corey, R.A, Hielkema, L, Stock, C, Stansfeld, P.J, Paulino, C, Haenelt, I.
Deposit date:2021-02-25
Release date:2021-07-28
Last modified:2024-07-10
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Deciphering ion transport and ATPase coupling in the intersubunit tunnel of KdpFABC.
Nat Commun, 12, 2021
7NNL
DownloadVisualize
BU of 7nnl by Molmil
Cryo-EM structure of the KdpFABC complex in an E1-ATP conformation loaded with K+
Descriptor: CARDIOLIPIN, PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER, POTASSIUM ION, ...
Authors:Silberberg, J.M, Corey, R.A, Hielkema, L, Stock, C, Stansfeld, P.J, Paulino, C, Haenelt, I.
Deposit date:2021-02-25
Release date:2021-07-28
Last modified:2021-09-29
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Deciphering ion transport and ATPase coupling in the intersubunit tunnel of KdpFABC.
Nat Commun, 12, 2021
7TPG
DownloadVisualize
BU of 7tpg by Molmil
Single-Particle Cryo-EM Structure of the WaaL O-antigen ligase in its ligand bound state
Descriptor: Fab Heavy (H) Chain, Fab Light (L) Chain, GERANYL DIPHOSPHATE, ...
Authors:Ashraf, K.U, Nygaard, R, Vickery, O.N, Erramilli, S.K, Herrera, C.M, McConville, T.H, Petrou, V.I, Giacometti, S.I, Dufrisne, M.B, Nosol, K, Zinkle, A.P, Graham, C.L.B, Loukeris, M, Kloss, B, Skorupinska-Tudek, K, Swiezewska, E, Roper, D, Clarke, O.B, Uhlemann, A.C, Kossiakoff, A.A, Trent, M.S, Stansfeld, P.J, Mancia, F.
Deposit date:2022-01-25
Release date:2022-04-06
Last modified:2022-04-27
Method:ELECTRON MICROSCOPY (3.23 Å)
Cite:Structural basis of lipopolysaccharide maturation by the O-antigen ligase.
Nature, 604, 2022
7TPJ
DownloadVisualize
BU of 7tpj by Molmil
Single-Particle Cryo-EM Structure of the WaaL O-antigen ligase in its apo state
Descriptor: Fab Heavy (H) Chain, Fab Light (L) Chain, Putative cell surface polysaccharide polymerase/ligase
Authors:Ashraf, K.U, Nygaard, R, Vickery, O.N, Erramilli, S.K, Herrera, C.M, McConville, T.H, Petrou, V.I, Giacometti, S.I, Dufrisne, M.B, Nosol, K, Zinkle, A.P, Graham, C.L.B, Loukeris, M, Kloss, B, Skorupinska-Tudek, K, Swiezewska, E, Roper, D, Clarke, O.B, Uhlemann, A.C, Kossiakoff, A.A, Trent, M.S, Stansfeld, P.J, Mancia, F.
Deposit date:2022-01-25
Release date:2022-04-06
Last modified:2022-04-27
Method:ELECTRON MICROSCOPY (3.46 Å)
Cite:Structural basis of lipopolysaccharide maturation by the O-antigen ligase.
Nature, 604, 2022
4B4A
DownloadVisualize
BU of 4b4a by Molmil
Structure of the TatC core of the twin arginine protein translocation system
Descriptor: Lauryl Maltose Neopentyl Glycol, SEC-INDEPENDENT PROTEIN TRANSLOCASE PROTEIN TATC
Authors:Rollauer, S.E, Tarry, M.J, Jaaskelainen, M, Graham, J.E, Jaeger, F, Krehenbrink, M, Roversi, P, McDowell, M.A, Stansfeld, P.J, Johnson, S, Liu, S.M, Lukey, M.J, Marcoux, J, Robinson, C.V, Sansom, M.S, Palmer, T, Hogbom, M, Berks, B.C, Lea, S.M.
Deposit date:2012-07-30
Release date:2012-12-05
Last modified:2012-12-19
Method:X-RAY DIFFRACTION (3.5 Å)
Cite:Structure of the Tatc Core of the Twin-Arginine Protein Transport System.
Nature, 49, 2012
6TPI
DownloadVisualize
BU of 6tpi by Molmil
EnvC bound to the FtsX periplasmic domain
Descriptor: Cell division protein FtsX, Murein hydrolase activator EnvC
Authors:Crow, A.
Deposit date:2019-12-13
Release date:2020-11-04
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Insights into bacterial cell division from a structure of EnvC bound to the FtsX periplasmic domain.
Proc.Natl.Acad.Sci.USA, 117, 2020
6T72
DownloadVisualize
BU of 6t72 by Molmil
Structure of the RsaA N-terminal domain bound to LPS
Descriptor: 4-acetamido-4,6-dideoxy-alpha-D-mannopyranose-(1-3)-4-acetamido-4,6-dideoxy-alpha-D-mannopyranose-(1-3)-beta-D-mannopyranose-(1-3)-4-acetamido-4,6-dideoxy-alpha-D-mannopyranose-(1-3)-4-acetamido-4,6-dideoxy-alpha-D-mannopyranose-(1-3)-beta-D-mannopyranose-(1-3)-4-acetamido-4,6-dideoxy-alpha-D-mannopyranose-(1-3)-4-acetamido-4,6-dideoxy-alpha-D-mannopyranose-(1-3)-beta-D-mannopyranose-(1-3)-4-acetamido-4,6-dideoxy-alpha-D-mannopyranose-(1-3)-4-acetamido-4,6-dideoxy-alpha-D-mannopyranose-(1-3)-beta-D-mannopyranose, CALCIUM ION, S-layer protein
Authors:von Kuegelgen, A, Bharat, T.A.M.
Deposit date:2019-10-21
Release date:2020-01-15
Last modified:2024-05-22
Method:ELECTRON MICROSCOPY (3.7 Å)
Cite:In Situ Structure of an Intact Lipopolysaccharide-Bound Bacterial Surface Layer.
Cell, 180, 2020
7APE
DownloadVisualize
BU of 7ape by Molmil
Crystal structure of LpqY from Mycobacterium thermoresistible in complex with trehalose
Descriptor: Lipoprotein (Sugar-binding) lpqY, alpha-D-glucopyranose-(1-1)-alpha-D-glucopyranose
Authors:Furze, C.M, Guy, C.M, Angula, J, Cameron, A.D, Fullam, E.
Deposit date:2020-10-16
Release date:2021-04-28
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structural basis of trehalose recognition by the mycobacterial LpqY-SugABC transporter.
J.Biol.Chem., 296, 2021
8C2O
DownloadVisualize
BU of 8c2o by Molmil
Structure of E. coli AmiA
Descriptor: N-acetylmuramoyl-L-alanine amidase AmiA, ZINC ION
Authors:Baverstock, T.C, Crow, A.
Deposit date:2022-12-22
Release date:2023-06-14
Last modified:2024-06-19
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Activator-induced conformational changes regulate division-associated peptidoglycan amidases.
Proc.Natl.Acad.Sci.USA, 120, 2023
8C0J
DownloadVisualize
BU of 8c0j by Molmil
Structure of AmiB enzymatic domain bound to the EnvC LytM domain
Descriptor: Murein hydrolase activator EnvC, N-acetylmuramoyl-L-alanine amidase, PHOSPHATE ION, ...
Authors:Crow, A.
Deposit date:2022-12-17
Release date:2023-06-14
Last modified:2024-06-19
Method:X-RAY DIFFRACTION (3.381 Å)
Cite:Activator-induced conformational changes regulate division-associated peptidoglycan amidases.
Proc.Natl.Acad.Sci.USA, 120, 2023
8C5V
DownloadVisualize
BU of 8c5v by Molmil
Chemotaxis core signalling unit from E protein lysed E. coli cells
Descriptor: Chemotaxis protein CheA, Chemotaxis protein CheW, Methyl-accepting chemotaxis protein I
Authors:Cassidy, C.K, Qin, Z, Zhang, P.
Deposit date:2023-01-10
Release date:2023-09-13
Last modified:2023-11-29
Method:ELECTRON MICROSCOPY (12 Å)
Cite:Structure of the native chemotaxis core signaling unit from phage E-protein lysed E. coli cells.
Mbio, 14, 2023
6YSF
DownloadVisualize
BU of 6ysf by Molmil
Structure of the flagellar MotAB stator complex from Clostridium sporogenes
Descriptor: Chemotaxis MotA protein, Chemotaxis motB protein
Authors:Lea, S.M, Deme, J.C, Johnson, S.J.
Deposit date:2020-04-22
Release date:2020-08-12
Last modified:2024-05-22
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Structures of the stator complex that drives rotation of the bacterial flagellum.
Nat Microbiol, 5, 2020
6Z7P
DownloadVisualize
BU of 6z7p by Molmil
Composite model of the Caulobacter crescentus S-layer bound to the O-antigen of lipopolysaccharide
Descriptor: 4-acetamido-4,6-dideoxy-alpha-D-mannopyranose-(1-3)-4-acetamido-4,6-dideoxy-alpha-D-mannopyranose-(1-3)-beta-D-mannopyranose-(1-3)-4-acetamido-4,6-dideoxy-alpha-D-mannopyranose-(1-3)-4-acetamido-4,6-dideoxy-alpha-D-mannopyranose-(1-3)-beta-D-mannopyranose-(1-3)-4-acetamido-4,6-dideoxy-alpha-D-mannopyranose-(1-3)-4-acetamido-4,6-dideoxy-alpha-D-mannopyranose-(1-3)-beta-D-mannopyranose, CALCIUM ION, S-layer protein
Authors:Bharat, T.A.M, von Kugelgen, A.
Deposit date:2020-06-01
Release date:2020-07-15
Last modified:2024-05-15
Method:ELECTRON MICROSCOPY (4.8 Å)
Cite:In Situ Structure of an Intact Lipopolysaccharide-Bound Bacterial Surface Layer.
Cell, 180, 2020
6YSL
DownloadVisualize
BU of 6ysl by Molmil
Structure of the flagellar MotAB stator complex from Bacillus subtilis
Descriptor: Motility protein A, Motility protein B
Authors:Lea, S.M, Deme, J.C, Johnson, S.J.
Deposit date:2020-04-22
Release date:2020-08-12
Last modified:2024-05-22
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Structures of the stator complex that drives rotation of the bacterial flagellum.
Nat Microbiol, 5, 2020
7OXR
DownloadVisualize
BU of 7oxr by Molmil
Cryo-EM structure of yeast Sei1 with locking helix deletion
Descriptor: BJ4_G0032880.mRNA.1.CDS.1
Authors:Deme, J.C, Lea, S.M.
Deposit date:2021-06-22
Release date:2021-10-13
Last modified:2021-10-20
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Mechanism of lipid droplet formation by the yeast Sei1/Ldb16 Seipin complex.
Nat Commun, 12, 2021

 

1234>

224931

PDB entries from 2024-09-11

PDB statisticsPDBj update infoContact PDBjnumon