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4JIW
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BU of 4jiw by Molmil
c1882 PAAR-repeat protein from Escherichia coli in complex with a VgrG-like beta-helix that is based on a fragment of T4 gp5
Descriptor: CHLORIDE ION, MAGNESIUM ION, Putative uncharacterized protein, ...
Authors:Buth, S.A, Leiman, P.G, Shneider, M.M.
Deposit date:2013-03-07
Release date:2013-08-14
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (3.402 Å)
Cite:PAAR-repeat proteins sharpen and diversify the type VI secretion system spike.
Nature, 500, 2013
4JIV
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BU of 4jiv by Molmil
VCA0105 PAAR-repeat protein from Vibrio cholerae in complex with a VgrG-like beta-helix that is based on a fragment of T4 gp5
Descriptor: 9-OCTADECENOIC ACID, MAGNESIUM ION, PALMITIC ACID, ...
Authors:Buth, S.A, Leiman, P.G, Shneider, M.M.
Deposit date:2013-03-07
Release date:2013-08-14
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.903 Å)
Cite:PAAR-repeat proteins sharpen and diversify the type VI secretion system spike.
Nature, 500, 2013
6U5B
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BU of 6u5b by Molmil
CryoEM Structure of Pyocin R2 - precontracted - baseplate
Descriptor: Glue PA0627, Ripcord PA0626, Sheath Initiator PA0617, ...
Authors:Ge, P, Avaylon, J, Scholl, D, Shneider, M.M, Browning, C, Buth, S.A, Plattner, M, Ding, K, Leiman, P.G, Miller, J.F, Zhou, Z.H.
Deposit date:2019-08-27
Release date:2020-04-15
Last modified:2024-03-20
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Action of a minimal contractile bactericidal nanomachine.
Nature, 580, 2020
6U5H
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BU of 6u5h by Molmil
CryoEM Structure of Pyocin R2 - precontracted - hub
Descriptor: Probable bacteriophage protein Pyocin R2
Authors:Ge, P, Avaylon, J, Scholl, D, Shneider, M.M, Browning, C, Buth, S.A, Plattner, M, Ding, K, Leiman, P.G, Miller, J.F, Zhou, Z.H.
Deposit date:2019-08-27
Release date:2020-04-15
Last modified:2024-03-20
Method:ELECTRON MICROSCOPY (4 Å)
Cite:Action of a minimal contractile bactericidal nanomachine.
Nature, 580, 2020
6P20
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BU of 6p20 by Molmil
Bacteriophage phiKZ gp163.1 PAAR repeat protein in complex with a T4 gp5 beta-helix fragment modified to mimic the phiKZ central spike gp164
Descriptor: 1,2-ETHANEDIOL, 9-OCTADECENOIC ACID, Baseplate central spike complex protein gp5,PHIKZ164, ...
Authors:Buth, S.A, Shneider, M.M, Leiman, P.G.
Deposit date:2019-05-20
Release date:2020-05-27
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.749 Å)
Cite:Bacteriophage phiKZ gp163.1 PAAR repeat protein in complex with a T4 gp5 beta-helix fragment modified to mimic the phiKZ central spike gp164
To Be Published
6P1Z
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BU of 6p1z by Molmil
Bacteriophage phiKZ gp163.1 PAAR repeat protein in complex with the C-terminal part of the T4 gp5 beta-helical domain
Descriptor: 9-OCTADECENOIC ACID, Baseplate central spike complex protein gp5, MAGNESIUM ION, ...
Authors:Buth, S.A, Shneider, M.M, Leiman, P.G.
Deposit date:2019-05-20
Release date:2020-05-27
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.099 Å)
Cite:Bacteriophage phiKZ gp163.1 PAAR repeat protein in complex with the C-terminal part of the T4 gp5 beta-helical domain
To Be Published
6P22
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BU of 6p22 by Molmil
Photorhabdus Virulence Cassette (PVC) PAAR repeat protein Pvc10 in complex with a T4 gp5 beta-helix fragment modified to mimic Pvc8, the central spike protein of PVC
Descriptor: 9-OCTADECENOIC ACID, CHIMERA OF CENTRAL SPIKE PROTEINS GP5 FROM PHAGE T4 AND PVC8 FROM PVC, MAGNESIUM ION, ...
Authors:Buth, S.A, Shneider, M.M, Leiman, P.G.
Deposit date:2019-05-20
Release date:2020-05-27
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.291 Å)
Cite:Photorhabdus Virulence Cassette (PVC) PAAR repeat protein Pvc10 in complex with a T4 gp5 beta-helix fragment modified to mimic Pvc8, the central spike protein of PVC
To Be Published
6P2A
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BU of 6p2a by Molmil
Chimera of bacteriophage OBP gp146 central spike protein and a T4 gp5 beta-helix fragment
Descriptor: 9-OCTADECENOIC ACID, CHIMERA OF BACTERIOPHAGE OBP GP146 AND A T4 GP5, FE (II) ION, ...
Authors:Buth, S.A, Shneider, M.M, Leiman, P.G.
Deposit date:2019-05-21
Release date:2020-05-27
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Chimera of bacteriophage OBP gp146 central spike protein and a T4 gp5 beta-helix fragment
To Be Published
5CES
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BU of 5ces by Molmil
C-terminal domain of the R-type pyocin baseplate protein PA0618
Descriptor: PA0618
Authors:Plattner, M, Buth, S.A, Shneider, M.M, Leiman, P.G.
Deposit date:2015-07-07
Release date:2016-07-27
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.102 Å)
Cite:Action of a minimal contractile bactericidal nanomachine.
Nature, 580, 2020
1YUE
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BU of 1yue by Molmil
Bacteriophage T4 capsid vertex protein gp24
Descriptor: Head vertex protein Gp24
Authors:Fokine, A, Leiman, P.G, Shneider, M.M, Ahvazi, B, Boeshans, K.M, Steven, A.C, Black, L.W, Mesyanzhinov, V.V, Rossmann, M.G.
Deposit date:2005-02-14
Release date:2005-04-26
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Structural and functional similarities between the capsid proteins of bacteriophages T4 and HK97 point to a common ancestry.
Proc.Natl.Acad.Sci.Usa, 102, 2005
4GBF
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BU of 4gbf by Molmil
Crystal structure of the C-terminal domain of gp131 from bacteriophage phiKZ
Descriptor: CHLORIDE ION, MAGNESIUM ION, PHIKZ131
Authors:Sycheva, L.V, Shneider, M.M, Leiman, P.G.
Deposit date:2012-07-27
Release date:2012-10-17
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.949 Å)
Cite:Crystal structure and location of gp131 in the bacteriophage phiKZ virion.
Virology, 434, 2012
6C72
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BU of 6c72 by Molmil
Crystal structure of a tailspike protein gp49 from Acinetobacter baumannii bacteriophage Fri1, a capsular polysaccharide depolymerase
Descriptor: Particle-associated glycoside hydrolase, ZINC ION
Authors:Buth, S.A, Garcon, A, Popova, A.V, Shneider, M.M, Leiman, P.G.
Deposit date:2018-01-19
Release date:2019-01-23
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.396 Å)
Cite:Exopolysaccharide degrading enzymes - specificity determinants of Acinetobacter baumannii phages
To Be Published
6CL5
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BU of 6cl5 by Molmil
Structure of P. aeruginosa R1 pyocin fiber PALES_06171 comprising C-terminal residues 323-701
Descriptor: FE (III) ION, MAGNESIUM ION, SODIUM ION, ...
Authors:Buth, S.A, Shneider, M.M, Leiman, P.G.
Deposit date:2018-03-01
Release date:2018-06-27
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.324 Å)
Cite:Structure and Analysis of R1 and R2 Pyocin Receptor-Binding Fibers.
Viruses, 10, 2018
8OQ0
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BU of 8oq0 by Molmil
Crystal structure of tailspike depolymerase (APK09_gp48) from Acinetobacter phage APK09
Descriptor: DI(HYDROXYETHYL)ETHER, Tailspike protein
Authors:Matyuta, I.O, Boyko, K.M, Nikolaeva, A.Y, Shneider, M.M, Timoshina, O.Y, Popova, A.V, Miroshnikov, K.A, Popov, V.O.
Deposit date:2023-04-10
Release date:2023-05-31
Last modified:2024-06-19
Method:X-RAY DIFFRACTION (2.59 Å)
Cite:Friunavirus Phage-Encoded Depolymerases Specific to Different Capsular Types of Acinetobacter baumannii .
Int J Mol Sci, 24, 2023
8OPZ
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BU of 8opz by Molmil
Crystal structure of a tailspike depolymerase (APK16_gp47) from Acinetobacter phage APK16
Descriptor: GLYCEROL, Tailspike depolymerase (APK16_gp47) from Acinetobacter phage APK16
Authors:Matyuta, I.O, Boyko, K.M, Nikolaeva, A.Y, Shneider, M.M, Timoshina, O.Y, Miroshnikov, K.A, Popov, V.O.
Deposit date:2023-04-10
Release date:2023-05-31
Last modified:2024-06-19
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Friunavirus Phage-Encoded Depolymerases Specific to Different Capsular Types of Acinetobacter baumannii .
Int J Mol Sci, 24, 2023
8OQ1
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BU of 8oq1 by Molmil
Crystal structure of tailspike depolymerase (APK14_gp49) from Acinetobacter phage vB_AbaP_APK14
Descriptor: CHLORIDE ION, DI(HYDROXYETHYL)ETHER, GLYCEROL, ...
Authors:Matyuta, I.O, Boyko, K.M, Nikolaeva, A.Y, Shneider, M.M, Timoshina, O.Y, Miroshnikov, K.A, Popov, V.O.
Deposit date:2023-04-10
Release date:2023-06-07
Last modified:2024-06-19
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Friunavirus Phage-Encoded Depolymerases Specific to Different Capsular Types of Acinetobacter baumannii.
Int J Mol Sci, 24, 2023
2FKK
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BU of 2fkk by Molmil
Crystal structure of the C-terminal domain of the bacteriophage T4 gene product 10
Descriptor: 1,2-ETHANEDIOL, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, BROMIDE ION, ...
Authors:Leiman, P.G, Shneider, M.M, Mesyanzhinov, V.V, Rossmann, M.G.
Deposit date:2006-01-04
Release date:2006-04-04
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:Evolution of bacteriophage tails: structure of t4 gene product 10
J.Mol.Biol., 358, 2006
2FL9
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BU of 2fl9 by Molmil
Evolution of bacteriophage tails: Structure of T4 gene product 10
Descriptor: Baseplate structural protein Gp10
Authors:Leiman, P.G, Shneider, M.M, Mesyanzhinov, V.V, Rossmann, M.G.
Deposit date:2006-01-05
Release date:2006-04-04
Last modified:2024-02-14
Method:ELECTRON MICROSCOPY (17 Å)
Cite:Evolution of bacteriophage tails: structure of t4 gene product 10
J.Mol.Biol., 358, 2006
2FL8
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BU of 2fl8 by Molmil
Fitting of the gp10 trimer structure into the cryoEM map of the bacteriophage T4 baseplate in the hexagonal conformation.
Descriptor: Baseplate structural protein Gp10
Authors:Leiman, P.G, Shneider, M.M, Mesyanzhinov, V.V, Rossmann, M.G.
Deposit date:2006-01-05
Release date:2006-04-04
Last modified:2024-02-14
Method:ELECTRON MICROSCOPY (12 Å)
Cite:Evolution of bacteriophage tails: structure of t4 gene product 10
J.Mol.Biol., 358, 2006
5IW9
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BU of 5iw9 by Molmil
Structure of bacteriophage T4 gp25, sheath polymerization initiator
Descriptor: Baseplate wedge protein gp25
Authors:Leiman, P.G, Browning, C, Shneider, M.M.
Deposit date:2016-03-22
Release date:2016-05-11
Last modified:2016-06-08
Method:X-RAY DIFFRACTION (2.47 Å)
Cite:Structure of the T4 baseplate and its function in triggering sheath contraction.
Nature, 533, 2016
6ORJ
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BU of 6orj by Molmil
Central spike of phiKZ phage tail
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, PHIKZ164, ...
Authors:Leiman, P.G, Browning, C, Shneider, M.M.
Deposit date:2019-04-30
Release date:2019-06-19
Method:X-RAY DIFFRACTION (2.37 Å)
Cite:Central spike of phiKZ phage tail
To Be Published
6PYT
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BU of 6pyt by Molmil
CryoEM Structure of Pyocin R2 - precontracted - trunk
Descriptor: Pyocin sheath PA0622, Pyocin tube PA0623
Authors:Ge, P, Avaylon, J, Scholl, D, Shneider, M.M, Browning, C, Buth, S.A, Plattner, M, Ding, K, Leiman, P.G, Miller, J.F, Zhou, Z.H.
Deposit date:2019-07-30
Release date:2020-04-15
Last modified:2024-03-20
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:Action of a minimal contractile bactericidal nanomachine.
Nature, 580, 2020
5W6H
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BU of 5w6h by Molmil
Crystal structure of Bacteriophage CBA120 tailspike protein 4 enzymatically active domain (TSP4dN, orf213)
Descriptor: ACETATE ION, CHLORIDE ION, POTASSIUM ION, ...
Authors:Plattner, M, Shneider, M.M, Leiman, P.G.
Deposit date:2017-06-16
Release date:2018-10-24
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.289 Å)
Cite:Structure and Function of the Branched Receptor-Binding Complex of Bacteriophage CBA120.
J.Mol.Biol., 431, 2019
5W6P
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BU of 5w6p by Molmil
Crystal structure of Bacteriophage CBA120 tailspike protein 2 enzymatically active domain (TSP2dN, orf211)
Descriptor: 1,2-ETHANEDIOL, POTASSIUM ION, ZINC ION, ...
Authors:Plattner, M, Shneider, M.M, Leiman, P.G.
Deposit date:2017-06-16
Release date:2018-10-24
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.335 Å)
Cite:Structure and Function of the Branched Receptor-Binding Complex of Bacteriophage CBA120.
J.Mol.Biol., 431, 2019
5W5P
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BU of 5w5p by Molmil
Crystal structure of Acinetobacter baumannii phage AM24 tailspike protein
Descriptor: Tail fiber protein, ZINC ION
Authors:Plattner, M, Shneider, M.M, Leiman, P.G.
Deposit date:2017-06-15
Release date:2018-12-19
Method:X-RAY DIFFRACTION (2.429 Å)
Cite:Crystal structure of Acinetobacter baumannii phage AM24 tailspike protein
To be Published

 

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