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3CES
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BU of 3ces by Molmil
Crystal Structure of E.coli MnmG (GidA), a Highly-Conserved tRNA Modifying Enzyme
分子名称: tRNA uridine 5-carboxymethylaminomethyl modification enzyme gidA
著者Shi, R, Matte, A, Cygler, M, Montreal-Kingston Bacterial Structural Genomics Initiative (BSGI)
登録日2008-02-29
公開日2009-03-03
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.412 Å)
主引用文献Structure-function analysis of Escherichia coli MnmG (GidA), a highly conserved tRNA-modifying enzyme.
J.Bacteriol., 191, 2009
1QYX
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BU of 1qyx by Molmil
Crystal structure of human estrogenic 17beta-hydroxysteroid dehydrogenase complex with androstenedione and NADP
分子名称: 4-ANDROSTENE-3-17-DIONE, Estradiol 17 beta-dehydrogenase 1, GLYCEROL, ...
著者Shi, R, Lin, S.X.
登録日2003-09-12
公開日2004-08-03
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (1.89 Å)
主引用文献Cofactor hydrogen bonding onto the protein main chain is conserved in the short chain dehydrogenase/reductase family and contributes to nicotinamide orientation.
J.Biol.Chem., 279, 2004
1QYV
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BU of 1qyv by Molmil
Crystal structure of human estrogenic 17beta-hydroxysteroid dehydrogenase complex with NADP
分子名称: Estradiol 17 beta-dehydrogenase 1, GLYCEROL, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
著者Shi, R, Lin, S.X.
登録日2003-09-12
公開日2004-08-03
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (1.81 Å)
主引用文献Cofactor hydrogen bonding onto the protein main chain is conserved in the short chain dehydrogenase/reductase family and contributes to nicotinamide orientation.
J.Biol.Chem., 279, 2004
1QYW
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BU of 1qyw by Molmil
Crystal structure of human estrogenic 17beta-hydroxysteroid dehydrogenase complex with androstanedione and NADP
分子名称: 5ALPHA-ANDROSTAN-3,17-DIONE, Estradiol 17 beta-dehydrogenase 1, GLYCEROL, ...
著者Shi, R, Lin, S.X.
登録日2003-09-12
公開日2004-08-03
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (1.63 Å)
主引用文献Cofactor hydrogen bonding onto the protein main chain is conserved in the short chain dehydrogenase/reductase family and contributes to nicotinamide orientation.
J.Biol.Chem., 279, 2004
4EEC
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BU of 4eec by Molmil
Crystal Structure of the glycopeptide antibiotic sulfotransferase StaL complexed with A3P and desulfo-A47934.
分子名称: ADENOSINE-3'-5'-DIPHOSPHATE, StaL, desulfo-A47934
著者Shi, R, Cygler, M.
登録日2012-03-28
公開日2012-07-04
最終更新日2023-12-06
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Structural basis of sulfonation of the glycopeptide antibiotic scaffold by the sulfotransferase StaL
Proc.Natl.Acad.Sci.USA, 2012
3G05
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BU of 3g05 by Molmil
Crystal structure of N-terminal domain (2-550) of E.coli MnmG
分子名称: SULFATE ION, tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG
著者Shi, R, Matte, A, Cygler, M, Montreal-Kingston Bacterial Structural Genomics Initiative (BSGI)
登録日2009-01-27
公開日2009-10-20
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (3.49 Å)
主引用文献Structure-function analysis of Escherichia coli MnmG (GidA), a highly conserved tRNA-modifying enzyme.
J.Bacteriol., 191, 2009
3BE5
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BU of 3be5 by Molmil
Crystal structure of FitE (crystal form 1), a group III periplasmic siderophore binding protein
分子名称: CHLORIDE ION, Putative iron compound-binding protein of ABC transporter family
著者Shi, R, Matte, A, Cygler, M, Montreal-Kingston Bacterial Structural Genomics Initiative (BSGI)
登録日2007-11-16
公開日2008-10-28
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Trapping open and closed forms of FitE-A group III periplasmic binding protein.
Proteins, 75, 2008
3BE6
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BU of 3be6 by Molmil
Crystal structure of FitE (crystal form 2), a group III periplasmic siderophore binding protein
分子名称: CHLORIDE ION, GLYCEROL, MAGNESIUM ION, ...
著者Shi, R, Matte, A, Cygler, M, Montreal-Kingston Bacterial Structural Genomics Initiative (BSGI)
登録日2007-11-16
公開日2008-10-28
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.82 Å)
主引用文献Trapping open and closed forms of FitE-A group III periplasmic binding protein.
Proteins, 75, 2008
3CQK
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BU of 3cqk by Molmil
Crystal Structure of L-xylulose-5-phosphate 3-epimerase UlaE (form B) complex with Zn2+ and sulfate
分子名称: L-ribulose-5-phosphate 3-epimerase ulaE, SULFATE ION, ZINC ION
著者Shi, R, Matte, A, Cygler, M, Montreal-Kingston Bacterial Structural Genomics Initiative (BSGI)
登録日2008-04-03
公開日2008-11-25
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.33 Å)
主引用文献Structure of L-xylulose-5-Phosphate 3-epimerase (UlaE) from the anaerobic L-ascorbate utilization pathway of Escherichia coli: identification of a novel phosphate binding motif within a TIM barrel fold.
J.Bacteriol., 190, 2008
3CQJ
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BU of 3cqj by Molmil
Crystal Structure of L-xylulose-5-phosphate 3-epimerase UlaE (form B) complex with Zn2+
分子名称: L-ribulose-5-phosphate 3-epimerase ulaE, ZINC ION
著者Shi, R, Matte, A, Cygler, M, Montreal-Kingston Bacterial Structural Genomics Initiative (BSGI)
登録日2008-04-03
公開日2008-11-25
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.04 Å)
主引用文献Structure of L-xylulose-5-Phosphate 3-epimerase (UlaE) from the anaerobic L-ascorbate utilization pathway of Escherichia coli: identification of a novel phosphate binding motif within a TIM barrel fold.
J.Bacteriol., 190, 2008
3CQH
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BU of 3cqh by Molmil
Crystal Structure of L-xylulose-5-phosphate 3-epimerase UlaE from the Anaerobic L-ascorbate Utilization Pathway of Escherichia coli
分子名称: L-ribulose-5-phosphate 3-epimerase ulaE, SULFATE ION
著者Shi, R, Matte, A, Cygler, M, Montreal-Kingston Bacterial Structural Genomics Initiative (BSGI)
登録日2008-04-03
公開日2008-11-25
最終更新日2017-10-25
実験手法X-RAY DIFFRACTION (2.08 Å)
主引用文献Structure of L-xylulose-5-Phosphate 3-epimerase (UlaE) from the anaerobic L-ascorbate utilization pathway of Escherichia coli: identification of a novel phosphate binding motif within a TIM barrel fold.
J.Bacteriol., 190, 2008
3CQI
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BU of 3cqi by Molmil
Crystal Structure of L-xylulose-5-phosphate 3-epimerase UlaE (form B) complex with sulfate
分子名称: L-ribulose-5-phosphate 3-epimerase ulaE, SULFATE ION
著者Shi, R, Matte, A, Cygler, M, Montreal-Kingston Bacterial Structural Genomics Initiative (BSGI)
登録日2008-04-03
公開日2008-11-25
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Structure of L-xylulose-5-Phosphate 3-epimerase (UlaE) from the anaerobic L-ascorbate utilization pathway of Escherichia coli: identification of a novel phosphate binding motif within a TIM barrel fold.
J.Bacteriol., 190, 2008
2OVB
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BU of 2ovb by Molmil
Crystal Structure of StaL-sulfate complex
分子名称: SULFATE ION, StaL
著者Shi, R, Matte, A, Cygler, M, Montreal-Kingston Bacterial Structural Genomics Initiative (BSGI)
登録日2007-02-13
公開日2007-02-27
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.61 Å)
主引用文献Crystal structure of StaL, a glycopeptide antibiotic sulfotransferase from Streptomyces toyocaensis.
J.Biol.Chem., 282, 2007
5VI0
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BU of 5vi0 by Molmil
Pseudomonas fluorescens alkylpurine DNA glycosylase AlkC bound to DNA containing an abasic site analog
分子名称: DNA (5'-D(*AP*AP*GP*AP*CP*TP*TP*GP*GP*AP*C)-3'), DNA (5'-D(*TP*GP*TP*CP*CP*AP*(3DR)P*GP*TP*CP*T)-3'), SODIUM ION, ...
著者Shi, R, Eichman, B.F.
登録日2017-04-13
公開日2017-10-25
最終更新日2019-11-27
実験手法X-RAY DIFFRACTION (2.396 Å)
主引用文献Selective base excision repair of DNA damage by the non-base-flipping DNA glycosylase AlkC.
EMBO J., 37, 2018
2OV8
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BU of 2ov8 by Molmil
Crystal Structure of StaL
分子名称: StaL
著者Shi, R, Matte, A, Cygler, M, Montreal-Kingston Bacterial Structural Genomics Initiative (BSGI)
登録日2007-02-13
公開日2007-02-27
最終更新日2017-10-18
実験手法X-RAY DIFFRACTION (2.58 Å)
主引用文献Crystal structure of StaL, a glycopeptide antibiotic sulfotransferase from Streptomyces toyocaensis.
J.Biol.Chem., 282, 2007
5VHV
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BU of 5vhv by Molmil
Pseudomonas fluorescens alkylpurine DNA glycosylase AlkC bound to DNA containing an oxocarbenium-intermediate analog
分子名称: (2R,5R,13R,16R)-9-(hydroxymethyl)-9-{[(2R)-2-hydroxypropoxy]methyl}-5,13-dimethyl-4,7,11,14-tetraoxaheptadecane-2,16-diol, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, DNA (5'-D(*AP*AP*GP*AP*CP*TP*TP*GP*GP*AP*C)-3'), ...
著者Shi, R, Eichman, B.F.
登録日2017-04-13
公開日2017-10-25
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.799 Å)
主引用文献Selective base excision repair of DNA damage by the non-base-flipping DNA glycosylase AlkC.
EMBO J., 37, 2018
2OVF
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BU of 2ovf by Molmil
Crystal Structure of StaL-PAP complex
分子名称: ADENOSINE-3'-5'-DIPHOSPHATE, StaL
著者Shi, R, Matte, A, Cygler, M, Montreal-Kingston Bacterial Structural Genomics Initiative (BSGI)
登録日2007-02-13
公開日2007-02-27
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.95 Å)
主引用文献Crystal structure of StaL, a glycopeptide antibiotic sulfotransferase from Streptomyces toyocaensis.
J.Biol.Chem., 282, 2007
3LVJ
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BU of 3lvj by Molmil
Crystal Structure of E.coli IscS-TusA complex (form 1)
分子名称: Cysteine desulfurase, PYRIDOXAL-5'-PHOSPHATE, Sulfurtransferase tusA
著者Shi, R, Proteau, A, Matte, A, Cygler, M, Montreal-Kingston Bacterial Structural Genomics Initiative (BSGI)
登録日2010-02-22
公開日2010-04-21
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.435 Å)
主引用文献Structural basis for Fe-S cluster assembly and tRNA thiolation mediated by IscS protein-protein interactions.
Plos Biol., 8, 2010
3LVK
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BU of 3lvk by Molmil
Crystal Structure of E.coli IscS-TusA complex (form 2)
分子名称: Cysteine desulfurase, PYRIDOXAL-5'-PHOSPHATE, Sulfurtransferase tusA
著者Shi, R, Proteau, A, Matte, A, Cygler, M, Montreal-Kingston Bacterial Structural Genomics Initiative (BSGI)
登録日2010-02-22
公開日2010-04-21
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.442 Å)
主引用文献Structural basis for Fe-S cluster assembly and tRNA thiolation mediated by IscS protein-protein interactions.
Plos Biol., 8, 2010
3LVM
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BU of 3lvm by Molmil
Crystal Structure of E.coli IscS
分子名称: Cysteine desulfurase, PYRIDOXAL-5'-PHOSPHATE
著者Shi, R, Proteau, A, Matte, A, Cygler, M, Montreal-Kingston Bacterial Structural Genomics Initiative (BSGI)
登録日2010-02-22
公開日2010-04-21
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献Structural basis for Fe-S cluster assembly and tRNA thiolation mediated by IscS protein-protein interactions.
Plos Biol., 8, 2010
7C01
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BU of 7c01 by Molmil
Molecular basis for a potent human neutralizing antibody targeting SARS-CoV-2 RBD
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, CB6 heavy chain, CB6 light chain, ...
著者Shi, R, Qi, J, Wang, Q, Gao, F.G, Yan, J.
登録日2020-04-29
公開日2020-05-27
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.88 Å)
主引用文献A human neutralizing antibody targets the receptor-binding site of SARS-CoV-2.
Nature, 584, 2020
3NY0
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BU of 3ny0 by Molmil
Crystal Structure of UreE from Helicobacter pylori (Ni2+ bound form)
分子名称: NICKEL (II) ION, Urease accessory protein ureE
著者Shi, R, Munger, C, Assinas, A, Matte, A, Cygler, M, Montreal-Kingston Bacterial Structural Genomics Initiative (BSGI)
登録日2010-07-14
公開日2010-08-25
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (3.09 Å)
主引用文献Crystal Structures of Apo and Metal-Bound Forms of the UreE Protein from Helicobacter pylori: Role of Multiple Metal Binding Sites
Biochemistry, 49, 2010
3NXZ
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BU of 3nxz by Molmil
Crystal Structure of UreE from Helicobacter pylori (Cu2+ bound form)
分子名称: COPPER (II) ION, Urease accessory protein ureE
著者Shi, R, Munger, C, Assinas, A, Matte, A, Cygler, M, Montreal-Kingston Bacterial Structural Genomics Initiative (BSGI)
登録日2010-07-14
公開日2010-08-25
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Crystal Structures of Apo and Metal-Bound Forms of the UreE Protein from Helicobacter pylori: Role of Multiple Metal Binding Sites
Biochemistry, 49, 2010
7D6I
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BU of 7d6i by Molmil
A neutralizing MAb targeting receptor-binding-domain of SARS-CoV-2
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Heavy chain of GH12-Fab, Light chain of GH12-Fab, ...
著者Shi, R, Qi, J.X, Gao, G.F, Yan, J.H.
登録日2020-09-30
公開日2021-10-13
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (3.41 Å)
主引用文献A neutralizing MAb targeting receptor-binding-domain of SARS-CoV-2
To Be Published
3PNL
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BU of 3pnl by Molmil
Crystal Structure of E.coli Dha kinase DhaK-DhaL complex
分子名称: ADENOSINE-5'-DIPHOSPHATE, GLYCEROL, MAGNESIUM ION, ...
著者Shi, R, McDonald, L, Matte, A, Cygler, M, Ekiel, I, Montreal-Kingston Bacterial Structural Genomics Initiative (BSGI)
登録日2010-11-19
公開日2011-01-12
最終更新日2017-11-08
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structural and mechanistic insight into covalent substrate binding by Escherichia coli dihydroxyacetone kinase.
Proc.Natl.Acad.Sci.USA, 108, 2011

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