Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
2A6X
DownloadVisualize
BU of 2a6x by Molmil
Crystal structure of Emp46p carbohydrate recognition domain (CRD), Y131F mutant
分子名称: 1,2-ETHANEDIOL, Emp46p, POTASSIUM ION
著者Satoh, T, Sato, K, Kanoh, A, Yamashita, K, Kato, R, Nakano, A, Wakatsuki, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2005-07-04
公開日2006-01-31
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献Structures of the carbohydrate recognition domain of Ca2+-independent cargo receptors Emp46p and Emp47p.
J.Biol.Chem., 281, 2006
1V5A
DownloadVisualize
BU of 1v5a by Molmil
Solution Structure of Covalitoxin I
分子名称: Covalitoxin-I
著者Kohno, T, Sasaki, T, Sato, K.
登録日2003-11-21
公開日2005-03-01
最終更新日2023-12-27
実験手法SOLUTION NMR
主引用文献Solution Structure of Covalitoxin I
To be Published
6JOU
DownloadVisualize
BU of 6jou by Molmil
Crystal structure of the human nucleosome containing H2A.Z.1 S42R
分子名称: DNA (146-MER), Histone H2A.Z, Histone H2B type 1-J, ...
著者Horikoshi, N, Sato, K, Mizukami, Y, Kurumizaka, H.
登録日2019-03-23
公開日2020-03-25
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.17 Å)
主引用文献Structure-based design of an H2A.Z.1 mutant stabilizing a nucleosome in vitro and in vivo.
Biochem.Biophys.Res.Commun., 515, 2019
1HP9
DownloadVisualize
BU of 1hp9 by Molmil
kappa-Hefutoxins: a novel Class of Potassium Channel Toxins from Scorpion venom
分子名称: kappa-hefutoxin 1
著者Srinivasan, K.N, Sivaraja, V, Huys, I, Sasaki, T, Cheng, B, Kumar, T.K.S, Sato, K, Tytgat, J, Yu, C, Brian Chia, C.S, Ranganathan, S, Bowie, J.H, Kini, R.M, Gopalakrishnakone, P.
登録日2000-12-12
公開日2002-08-28
最終更新日2022-02-23
実験手法SOLUTION NMR
主引用文献kappa-Hefutoxin1, a novel toxin from the scorpion Heterometrus fulvipes with unique structure and function. Importance of the functional diad in potassium channel selectivity.
J.Biol.Chem., 277, 2002
3WMD
DownloadVisualize
BU of 3wmd by Molmil
Crystal structure of epoxide hydrolase MonBI
分子名称: Probable monensin biosynthesis isomerase
著者Minami, A, Ose, T, Sato, K, Oikawa, A, Kuroki, K, Maenaka, K, Oguri, H, Oikawa, H.
登録日2013-11-16
公開日2014-01-15
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.999 Å)
主引用文献Allosteric regulation of epoxide opening cascades by a pair of epoxide hydrolases in monensin biosynthesis
Acs Chem.Biol., 9, 2014
5ZO9
DownloadVisualize
BU of 5zo9 by Molmil
Eg5 motor domain in complex with STLC-type inhibitor PVEI0021 (C2 type)
分子名称: (2R)-2-azanyl-3-[(4-methoxyphenyl)-diphenyl-methyl]sulfanyl-propanoic acid, ADENOSINE-5'-DIPHOSPHATE, Kinesin-like protein KIF11, ...
著者Yokoyama, H, Sato, K.
登録日2018-04-12
公開日2018-10-10
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Structural and Thermodynamic Basis of the Enhanced Interaction between Kinesin Spindle Protein Eg5 and STLC-type Inhibitors.
Acs Omega, 3, 2018
5ZO8
DownloadVisualize
BU of 5zo8 by Molmil
Eg5 motor domain in complex with STLC-type inhibitor PVEI0021 (P21 type)
分子名称: (2R)-2-azanyl-3-[(4-methoxyphenyl)-diphenyl-methyl]sulfanyl-propanoic acid, ADENOSINE-5'-DIPHOSPHATE, Kinesin-like protein KIF11, ...
著者Yokoyama, H, Sato, K.
登録日2018-04-12
公開日2018-10-10
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structural and Thermodynamic Basis of the Enhanced Interaction between Kinesin Spindle Protein Eg5 and STLC-type Inhibitors.
Acs Omega, 3, 2018
5ZO7
DownloadVisualize
BU of 5zo7 by Molmil
Kinesin spindle protein Eg5 in complex with STLC-type inhibitor PVEI0138
分子名称: (2R)-2-azanyl-3-[[2-(4-methoxyphenyl)-2-tricyclo[9.4.0.0^{3,8}]pentadeca-1(11),3,5,7,12,14-hexaenyl]sulfanyl]propanoic acid, ADENOSINE-5'-DIPHOSPHATE, Kinesin-like protein KIF11, ...
著者Yokoyama, H, Sato, K.
登録日2018-04-12
公開日2018-10-10
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Structural and Thermodynamic Basis of the Enhanced Interaction between Kinesin Spindle Protein Eg5 and STLC-type Inhibitors.
Acs Omega, 3, 2018
3WAA
DownloadVisualize
BU of 3waa by Molmil
The nucleosome containing human H2A.Z.2
分子名称: DNA (146-MER), Histone H2A.V, Histone H2B type 1-J, ...
著者Horikoshi, N, Sato, K, Shimada, K, Arimura, Y, Osakabe, A, Tachiwana, H, Iwasaki, W, Kagawa, W, Harata, M, Kimura, H, Kurumizaka, H.
登録日2013-04-30
公開日2013-12-18
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献Structural polymorphism in the L1 loop regions of human H2A.Z.1 and H2A.Z.2
Acta Crystallogr.,Sect.D, 69, 2013
3WA9
DownloadVisualize
BU of 3wa9 by Molmil
The nucleosome containing human H2A.Z.1
分子名称: DNA (146-MER), Histone H2A.Z, Histone H2B type 1-J, ...
著者Horikoshi, N, Sato, K, Shimada, K, Arimura, Y, Osakabe, A, Tachiwana, H, Iwasaki, W, Kagawa, W, Harata, M, Kimura, H, Kurumizaka, H.
登録日2013-04-30
公開日2013-12-18
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (3.07 Å)
主引用文献Structural polymorphism in the L1 loop regions of human H2A.Z.1 and H2A.Z.2
Acta Crystallogr.,Sect.D, 69, 2013
2E42
DownloadVisualize
BU of 2e42 by Molmil
Crystal structure of C/EBPbeta Bzip homodimer V285A mutant bound to A High Affinity DNA fragment
分子名称: CCAAT/enhancer-binding protein beta, DNA (5'-D(P*DAP*DAP*DTP*DAP*DTP*DTP*DGP*DCP*DGP*DCP*DAP*DAP*DTP*DCP*DCP*DT)-3'), DNA (5'-D(P*DTP*DAP*DGP*DGP*DAP*DTP*DTP*DGP*DCP*DGP*DCP*DAP*DAP*DTP*DAP*DT)-3')
著者Tahirov, T.H, Inoue-Bungo, T, Sato, K, Shiina, M, Hamada, K, Ogata, K.
登録日2006-12-01
公開日2007-12-18
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structural Basis for Flexible Base Recognition by C/Ebpbeta
To be Published
2E43
DownloadVisualize
BU of 2e43 by Molmil
Crystal structure of C/EBPbeta Bzip homodimer K269A mutant bound to A High Affinity DNA fragment
分子名称: CCAAT/enhancer-binding protein beta, DNA (5'-D(P*DAP*DAP*DTP*DAP*DTP*DTP*DGP*DCP*DGP*DCP*DAP*DAP*DTP*DCP*DCP*DT)-3'), DNA (5'-D(P*DTP*DAP*DGP*DGP*DAP*DTP*DTP*DGP*DCP*DGP*DCP*DAP*DAP*DTP*DAP*DT)-3')
著者Tahirov, T.H, Inoue-Bungo, T, Sato, K, Shiina, M, Hamada, K, Ogata, K.
登録日2006-12-01
公開日2007-12-18
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Structural Basis for Flexible Base Recognition by C/Ebpbeta
To be Published
2DI2
DownloadVisualize
BU of 2di2 by Molmil
NMR structure of the HIV-2 nucleocapsid protein
分子名称: Nucleocapsid protein p7, ZINC ION
著者Matsui, T, Kodera, Y, Endoh, H, Miyauchi, E, Komatsu, H, Sato, K, Tanaka, T, Kohno, T, Maeda, T.
登録日2006-03-27
公開日2007-03-13
最終更新日2021-11-10
実験手法SOLUTION NMR
主引用文献RNA Recognition Mechanism of the Minimal Active Domain of the Human Immunodeficiency Virus Type-2 Nucleocapsid Protein
J.Biochem.(Tokyo), 141, 2007
2XV0
DownloadVisualize
BU of 2xv0 by Molmil
Pseudomonas aeruginosa Azurin with mutated metal-binding loop sequence (CAAHAAM), chemically reduced, pH4.8
分子名称: AZURIN, COPPER (I) ION
著者Li, C, Sato, K, Monari, S, Salard, I, Sola, M, Banfield, M.J, Dennison, C.
登録日2010-10-22
公開日2010-12-29
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Metal-Binding Loop Length is a Determinant of the Pka of a Histidine Ligand at a Type 1 Copper Site
Inorg.Chem., 50, 2011
2XV3
DownloadVisualize
BU of 2xv3 by Molmil
Pseudomonas aeruginosa Azurin with mutated metal-binding loop sequence (CAAAAHAAAAM), chemically reduced, pH5.3
分子名称: AZURIN, COPPER (I) ION
著者Li, C, Sato, K, Monari, S, Salard, I, Sola, M, Banfield, M.J, Dennison, C.
登録日2010-10-22
公開日2010-12-29
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Metal-Binding Loop Length is a Determinant of the Pka of a Histidine Ligand at a Type 1 Copper Site
Inorg.Chem., 50, 2011
2XV2
DownloadVisualize
BU of 2xv2 by Molmil
Pseudomonas aeruginosa Azurin with mutated metal-binding loop sequence (CAAHAAM), chemically reduced, pH4.2
分子名称: AZURIN, COPPER (I) ION
著者Li, C, Sato, K, Monari, S, Salard, I, Sola, M, Banfield, M.J, Dennison, C.
登録日2010-10-22
公開日2010-12-29
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Metal-Binding Loop Length is a Determinant of the Pka of a Histidine Ligand at a Type 1 Copper Site
Inorg.Chem., 50, 2011
7L1X
DownloadVisualize
BU of 7l1x by Molmil
Structure of human CK2 alpha kinase (catalytic subunit) with the inhibitor 108600.
分子名称: (2~{Z})-6-[[2,6-bis(chloranyl)phenyl]methylsulfonyl]-2-[[4-oxidanyl-3-[oxidanyl(oxidanylidene)-$l^{4}-azanyl]phenyl]methylidene]-4~{H}-1,4-benzothiazin-3-one, Casein kinase II subunit alpha, GLYCEROL, ...
著者Rechkoblit, O, Aggarwal, A.K.
登録日2020-12-15
公開日2021-08-11
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Simultaneous CK2/TNIK/DYRK1 inhibition by 108600 suppresses triple negative breast cancer stem cells and chemotherapy-resistant disease.
Nat Commun, 12, 2021
3FT0
DownloadVisualize
BU of 3ft0 by Molmil
Pseudomonas aeruginosa Azurin with mutated metal-binding loop sequence (CAAAAHAAAAM), chemically reduced
分子名称: Azurin, COPPER (I) ION
著者Banfield, M.J.
登録日2009-01-12
公開日2009-03-10
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Metal-binding loop length and not sequence dictates structure.
Proc.Natl.Acad.Sci.USA, 106, 2009
3FSZ
DownloadVisualize
BU of 3fsz by Molmil
Pseudomonas aeruginosa Azurin with mutated metal-binding loop sequence (CAAAAHAAAAM)
分子名称: Azurin, COPPER (II) ION
著者Banfield, M.J.
登録日2009-01-12
公開日2009-03-10
最終更新日2014-04-02
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Metal-binding loop length and not sequence dictates structure.
Proc.Natl.Acad.Sci.USA, 106, 2009
3FSW
DownloadVisualize
BU of 3fsw by Molmil
Pseudomonas aeruginosa Azurin with mutated metal-binding loop sequence (CAAAAHAAAM)
分子名称: Azurin, COPPER (II) ION
著者Banfield, M.J.
登録日2009-01-12
公開日2009-03-10
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Metal-binding loop length and not sequence dictates structure.
Proc.Natl.Acad.Sci.USA, 106, 2009
3FSA
DownloadVisualize
BU of 3fsa by Molmil
Pseudomonas aeruginosa Azurin with mutated metal-binding loop sequence (CAAHAAM); chemically reduced.
分子名称: Azurin, COPPER (I) ION
著者Banfield, M.J.
登録日2009-01-09
公開日2009-03-10
最終更新日2017-11-01
実験手法X-RAY DIFFRACTION (0.98 Å)
主引用文献Metal-binding loop length and not sequence dictates structure.
Proc.Natl.Acad.Sci.USA, 106, 2009
3FS9
DownloadVisualize
BU of 3fs9 by Molmil
Pseudomonas aeruginosa Azurin with mutated metal-binding loop sequence (CAAHAAM)
分子名称: Azurin, COPPER (II) ION
著者Banfield, M.J.
登録日2009-01-09
公開日2009-03-10
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.05 Å)
主引用文献Metal-binding loop length and not sequence dictates structure.
Proc.Natl.Acad.Sci.USA, 106, 2009
3FSV
DownloadVisualize
BU of 3fsv by Molmil
Pseudomonas aeruginosa Azurin with mutated metal-binding loop sequence (CAAAHAAAM)
分子名称: Azurin, COPPER (II) ION
著者Banfield, M.J.
登録日2009-01-12
公開日2009-03-10
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Metal-binding loop length and not sequence dictates structure.
Proc.Natl.Acad.Sci.USA, 106, 2009
8G0L
DownloadVisualize
BU of 8g0l by Molmil
Semi-synthetic CoA-alpha-Synuclein Constructs Trap N-terminal Acetyltransferase NatB for Binding Mechanism Studies
分子名称: Alpha-synuclein, CARBOXYMETHYL COENZYME *A, N-alpha-acetyltransferase 20, ...
著者Gardner, S.M, Marmorstein, R.
登録日2023-01-31
公開日2023-05-03
実験手法ELECTRON MICROSCOPY (3.39 Å)
主引用文献Semi-synthetic CoA-alpha-Synuclein Constructs Trap N-terminal Acetyltransferase NatB for Binding Mechanism Studies.
Biorxiv, 2023
6WNK
DownloadVisualize
BU of 6wnk by Molmil
Macrocyclic peptides TDI5575 that selectively inhibit the Mycobacterium tuberculosis proteasome
分子名称: (12S,15S)-N-[(2-fluorophenyl)methyl]-10,13-dioxo-12-{2-oxo-2-[(2R)-2-phenylpyrrolidin-1-yl]ethyl}-2-oxa-11,14-diazatricyclo[15.2.2.1~3,7~]docosa-1(19),3(22),4,6,17,20-hexaene-15-carboxamide, CITRIC ACID, DIMETHYLFORMAMIDE, ...
著者Hsu, H.C, Li, H.
登録日2020-04-22
公開日2021-04-28
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.28 Å)
主引用文献Macrocyclic Peptides that Selectively Inhibit the Mycobacterium tuberculosis Proteasome.
J.Med.Chem., 64, 2021

219869

件を2024-05-15に公開中

PDB statisticsPDBj update infoContact PDBjnumon