1KB1
 
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1SN0
 | | Crystal Structure Of Sea Bream Transthyretin in complex with thyroxine At 1.9A Resolution | | Descriptor: | 3,5,3',5'-TETRAIODO-L-THYRONINE, SULFATE ION, transthyretin | | Authors: | Eneqvist, T, Lundberg, E, Karlsson, A, Huang, S, Santos, C.R, Power, D.M, Sauer-Eriksson, A.E. | | Deposit date: | 2004-03-10 | | Release date: | 2004-08-03 | | Last modified: | 2023-11-15 | | Method: | X-RAY DIFFRACTION (1.9 Å) | | Cite: | High resolution crystal structures of piscine transthyretin reveal different binding modes for triiodothyronine and thyroxine.
J.Biol.Chem., 279, 2004
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6XN0
 | | Crystal structure of GH43_1 enzyme from Xanthomonas citri | | Descriptor: | CALCIUM ION, DI(HYDROXYETHYL)ETHER, GLYCEROL, ... | | Authors: | Morais, M.A.B, Tonoli, C.C.C, Santos, C.R, Murakami, M.T. | | Deposit date: | 2020-07-02 | | Release date: | 2020-12-02 | | Last modified: | 2023-10-18 | | Method: | X-RAY DIFFRACTION (1.709 Å) | | Cite: | Two distinct catalytic pathways for GH43 xylanolytic enzymes unveiled by X-ray and QM/MM simulations.
Nat Commun, 12, 2021
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6XN2
 | | Crystal structure of the GH43_1 enzyme from Xanthomonas citri complexed with xylotriose | | Descriptor: | CALCIUM ION, DI(HYDROXYETHYL)ETHER, GLYCEROL, ... | | Authors: | Morais, M.A.B, Tonoli, C.C.C, Santos, C.R, Murakami, M.T. | | Deposit date: | 2020-07-02 | | Release date: | 2020-12-02 | | Last modified: | 2023-10-18 | | Method: | X-RAY DIFFRACTION (1.652 Å) | | Cite: | Two distinct catalytic pathways for GH43 xylanolytic enzymes unveiled by X-ray and QM/MM simulations.
Nat Commun, 12, 2021
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6XN1
 | | Crystal structure of the GH43_1 enzyme from Xanthomonas citri complexed with xylose | | Descriptor: | CALCIUM ION, DI(HYDROXYETHYL)ETHER, GLYCEROL, ... | | Authors: | Morais, M.A.B, Tonoli, C.C.C, Santos, C.R, Murakami, M.T. | | Deposit date: | 2020-07-02 | | Release date: | 2020-12-02 | | Last modified: | 2023-10-18 | | Method: | X-RAY DIFFRACTION (1.8 Å) | | Cite: | Two distinct catalytic pathways for GH43 xylanolytic enzymes unveiled by X-ray and QM/MM simulations.
Nat Commun, 12, 2021
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3S2C
 | | Structure of the thermostable GH51 alpha-L-arabinofuranosidase from Thermotoga petrophila RKU-1 | | Descriptor: | Alpha-N-arabinofuranosidase | | Authors: | Souza, T.A.C.B, Santos, C.R, Souza, A.R, Oldiges, D.P, Ruller, R, Prade, R.A, Squina, F.M, Murakami, M.T. | | Deposit date: | 2011-05-16 | | Release date: | 2012-02-01 | | Last modified: | 2023-09-13 | | Method: | X-RAY DIFFRACTION (3 Å) | | Cite: | Structure of a novel thermostable GH51 Alpha-L-arabinofuranosidase from Thermotoga petrophila RKU-1
Protein Sci., 20, 2011
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4M1R
 | | Structure of a novel cellulase 5 from a sugarcane soil metagenomic library | | Descriptor: | 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Cellulase 5 | | Authors: | Paiva, J.H, Alvarez, T.M, Cairo, J.P, Paixao, D.A, Almeida, R.A, Tonoli, C.C.C, Ruiz, D.M, Ruller, R, Santos, C.R, Squina, F.M, Murakami, M.T. | | Deposit date: | 2013-08-03 | | Release date: | 2014-02-05 | | Last modified: | 2024-02-28 | | Method: | X-RAY DIFFRACTION (1.8 Å) | | Cite: | Structure and function of a novel cellulase 5 from sugarcane soil metagenome.
Plos One, 8, 2013
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4M29
 | | Structure of a GH39 Beta-xylosidase from Caulobacter crescentus | | Descriptor: | 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, Beta-xylosidase | | Authors: | Polo, C.C, Santos, C.R, Correa, J.M, Simao, R.C.G, Seixas, F.A.V, Murakami, M.T. | | Deposit date: | 2013-08-05 | | Release date: | 2013-08-14 | | Last modified: | 2023-09-20 | | Method: | X-RAY DIFFRACTION (2.1 Å) | | Cite: | Structure of a GH39 Beta-xylosidase from Caulobacter crescentus
Thesis
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6UQJ
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4DFS
 | | Structure of the catalytic domain of an endo-1,3-beta-glucanase (laminarinase) from Thermotoga petrophila RKU-1 | | Descriptor: | CALCIUM ION, Glycoside hydrolase, family 16, ... | | Authors: | Meza, A.N, Ruller, R, Prade, R.A, Squina, F.M, Santos, C.R, Murakami, M.T. | | Deposit date: | 2012-01-24 | | Release date: | 2012-03-14 | | Last modified: | 2023-09-13 | | Method: | X-RAY DIFFRACTION (3.754 Å) | | Cite: | Structural studies of an endo-1,3-beta-glucanase from Thermotoga petrophila RKU-1
To be Published
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3NGS
 | | Structure of Leishmania nucleoside diphosphate kinase b with ordered nucleotide-binding loop | | Descriptor: | 2,3-DIHYDROXY-1,4-DITHIOBUTANE, Nucleoside diphosphate kinase, PHOSPHATE ION | | Authors: | Trindade, D.M, Sousa, T.A.C.B, Tonoli, C.C.C, Santos, C.R, Arni, R.K, Ward, R.J, Oliveira, A.H.C, Murakami, M.T. | | Deposit date: | 2010-06-13 | | Release date: | 2011-04-27 | | Last modified: | 2024-02-21 | | Method: | X-RAY DIFFRACTION (1.8 Å) | | Cite: | Molecular adaptability of nucleoside diphosphate kinase b from trypanosomatid parasites: stability, oligomerization and structural determinants of nucleotide binding.
Mol Biosyst, 7, 2011
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3NGT
 | | Structure of Leishmania NDKb complexed with AMP. | | Descriptor: | ADENOSINE MONOPHOSPHATE, Nucleoside diphosphate kinase | | Authors: | Trindade, D.M, Sousa, T.A.C.B, Tonoli, C.C.C, Santos, C.R, Arni, R.K, Ward, R.J, Oliveira, A.H.C, Murakami, M.T. | | Deposit date: | 2010-06-13 | | Release date: | 2011-04-27 | | Last modified: | 2024-02-21 | | Method: | X-RAY DIFFRACTION (2.57 Å) | | Cite: | Molecular adaptability of nucleoside diphosphate kinase b from trypanosomatid parasites: stability, oligomerization and structural determinants of nucleotide binding.
Mol Biosyst, 7, 2011
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3NGU
 | | Structure of Leishmania NDKb complexed with ADP. | | Descriptor: | ADENOSINE-5'-DIPHOSPHATE, Nucleoside diphosphate kinase | | Authors: | Trindade, D.M, Sousa, T.A.C.B, Tonoli, C.C.C, Santos, C.R, Arni, R.K, Ward, R.J, Oliveira, A.H.C, Murakami, M.T. | | Deposit date: | 2010-06-13 | | Release date: | 2011-04-27 | | Last modified: | 2024-02-21 | | Method: | X-RAY DIFFRACTION (2.29 Å) | | Cite: | Molecular adaptability of nucleoside diphosphate kinase b from trypanosomatid parasites: stability, oligomerization and structural determinants of nucleotide binding.
Mol Biosyst, 7, 2011
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3NGR
 | | Crystal structure of Leishmania nucleoside diphosphate kinase b with unordered nucleotide-binding loop. | | Descriptor: | Nucleoside diphosphate kinase, PHOSPHATE ION | | Authors: | Trindade, D.M, Sousa, T.A.C.B, Tonoli, C.C.C, Santos, C.R, Arni, R.K, Ward, R.J, Oliveira, A.H.C, Murakami, M.T. | | Deposit date: | 2010-06-13 | | Release date: | 2011-04-27 | | Last modified: | 2023-09-06 | | Method: | X-RAY DIFFRACTION (2.95 Å) | | Cite: | Molecular adaptability of nucleoside diphosphate kinase b from trypanosomatid parasites: stability, oligomerization and structural determinants of nucleotide binding.
Mol Biosyst, 7, 2011
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3PRV
 | | Nucleoside diphosphate kinase B from Trypanosoma cruzi | | Descriptor: | Nucleoside diphosphate kinase | | Authors: | Souza, T.A.C.B, Trindade, D.M, Tonoli, C.C.C, Santos, C.R, Oliveira, A.H.C, Murakami, M.T. | | Deposit date: | 2010-11-30 | | Release date: | 2011-05-18 | | Last modified: | 2024-02-21 | | Method: | X-RAY DIFFRACTION (2.69 Å) | | Cite: | Molecular adaptability of nucleoside diphosphate kinase b from trypanosomatid parasites: stability, oligomerization and structural determinants of nucleotide binding.
Mol Biosyst, 7, 2011
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1SN2
 | | Crystal Structure of Sea Bream Transthyretin at 1.90A Resolution | | Descriptor: | SULFATE ION, transthyretin | | Authors: | Eneqvist, T, Lundberg, E, Karlsson, A, Huang, S, Cantos, C.R, Power, D.M, Sauer-Eriksson, A.E. | | Deposit date: | 2004-03-10 | | Release date: | 2004-08-03 | | Last modified: | 2023-08-23 | | Method: | X-RAY DIFFRACTION (1.75 Å) | | Cite: | High resolution crystal structures of piscine transthyretin reveal different binding modes for triiodothyronine and thyroxine.
J.Biol.Chem., 279, 2004
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1SN5
 | | Crystal Structure of Sea Bream Transthyretin in complex with Triiodothyronine at 1.90A Resolution | | Descriptor: | 3,5,3'TRIIODOTHYRONINE, SULFATE ION, transthyretin | | Authors: | Eneqvist, T, Lundberg, E, Karlsson, A, Huang, S, Cantos, C.R, Power, D.M, Sauer-Eriksson, A.E. | | Deposit date: | 2004-03-10 | | Release date: | 2004-08-03 | | Last modified: | 2023-11-15 | | Method: | X-RAY DIFFRACTION (1.9 Å) | | Cite: | High resolution crystal structures of piscine transthyretin reveal different binding modes for triiodothyronine and thyroxine.
J.Biol.Chem., 279, 2004
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5DOM
 | | Crystal structure, maturation and flocculating properties of a 2S albumin from Moringa oleifera seeds | | Descriptor: | 1,2-ETHANEDIOL, 2S albumin, ACETATE ION | | Authors: | Ullah, A, Murakami, M.T, Arni, R.K. | | Deposit date: | 2015-09-11 | | Release date: | 2015-11-11 | | Last modified: | 2020-01-01 | | Method: | X-RAY DIFFRACTION (1.69 Å) | | Cite: | Crystal structure of mature 2S albumin from Moringa oleifera seeds.
Biochem.Biophys.Res.Commun., 468, 2015
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6BYI
 | | Crystal structure of the acid-base mutant (E477A) of the GH2 exo-beta-mannanase from Xanthomonas axonopodis pv. citri | | Descriptor: | Beta-mannosidase, beta-D-mannopyranose | | Authors: | Domingues, M.N, Vieira, P.S, Morais, M.A.B, Murakami, M.T. | | Deposit date: | 2017-12-20 | | Release date: | 2018-07-18 | | Last modified: | 2024-03-13 | | Method: | X-RAY DIFFRACTION (2.2 Å) | | Cite: | Structural basis of exo-beta-mannanase activity in the GH2 family.
J. Biol. Chem., 293, 2018
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6BYC
 | | Crystal structure of the GH2 exo-beta-mannanase from Xanthomonas axonopodis pv. citri | | Descriptor: | ACETATE ION, Beta-mannosidase, DI(HYDROXYETHYL)ETHER, ... | | Authors: | Domingues, M.N, Vieira, P.S, Morais, M.A.B, Murakami, M.T. | | Deposit date: | 2017-12-20 | | Release date: | 2018-07-18 | | Last modified: | 2023-10-04 | | Method: | X-RAY DIFFRACTION (1.897 Å) | | Cite: | Structural basis of exo-beta-mannanase activity in the GH2 family.
J. Biol. Chem., 293, 2018
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6BYE
 | | Crystal structure of the GH2 exo-beta-mannanase from Xanthomonas axonopodis pv. citri in complex with mannose | | Descriptor: | ACETATE ION, Beta-mannosidase, beta-D-mannopyranose | | Authors: | Domingues, M.N, Vieira, P.S, Morais, M.A.B, Murakami, M.T. | | Deposit date: | 2017-12-20 | | Release date: | 2018-07-18 | | Last modified: | 2024-03-13 | | Method: | X-RAY DIFFRACTION (2.126 Å) | | Cite: | Structural basis of exo-beta-mannanase activity in the GH2 family.
J. Biol. Chem., 293, 2018
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6BYG
 | | Crystal structure of the nucleophile mutant (E575A) of the GH2 exo-beta-mannanase from Xanthomonas axonopodis pv. citri | | Descriptor: | Beta-mannosidase, beta-D-mannopyranose | | Authors: | Domingues, M.N, Vieira, P.S, Morais, M.A.B, Murakami, M.T. | | Deposit date: | 2017-12-20 | | Release date: | 2018-07-18 | | Last modified: | 2024-03-13 | | Method: | X-RAY DIFFRACTION (1.999 Å) | | Cite: | Structural basis of exo-beta-mannanase activity in the GH2 family.
J. Biol. Chem., 293, 2018
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4D9H
 | | Crystal structure of the hexameric purine nucleoside phosphorylase from Bacillus subtilis in complex with adenosine | | Descriptor: | ADENOSINE, Purine nucleoside phosphorylase deoD-type | | Authors: | Giuseppe, P.O, Martins, N.H, Meza, A.N, Murakami, M.T. | | Deposit date: | 2012-01-11 | | Release date: | 2012-09-26 | | Last modified: | 2024-02-28 | | Method: | X-RAY DIFFRACTION (1.91 Å) | | Cite: | Insights into phosphate cooperativity and influence of substrate modifications on binding and catalysis of hexameric purine nucleoside phosphorylases.
Plos One, 7, 2012
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4DA0
 | | Crystal structure of the hexameric purine nucleoside phosphorylase from Bacillus subtilis in complex with 2'-deoxyguanosine | | Descriptor: | 2'-DEOXY-GUANOSINE, CHLORIDE ION, Purine nucleoside phosphorylase deoD-type | | Authors: | Martins, N.H, Giuseppe, P.O, Meza, A.N, Murakami, M.T. | | Deposit date: | 2012-01-12 | | Release date: | 2012-09-26 | | Last modified: | 2024-02-28 | | Method: | X-RAY DIFFRACTION (2.95 Å) | | Cite: | Insights into phosphate cooperativity and influence of substrate modifications on binding and catalysis of hexameric purine nucleoside phosphorylases.
Plos One, 7, 2012
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4DA6
 | | Crystal structure of the hexameric purine nucleoside phosphorylase from Bacillus subtilis in complex with ganciclovir | | Descriptor: | 9-(1,3-DIHYDROXY-PROPOXYMETHANE)GUANINE, CHLORIDE ION, DIMETHYL SULFOXIDE, ... | | Authors: | Martins, N.H, Giuseppe, P.O, Meza, A.N, Murakami, M.T. | | Deposit date: | 2012-01-12 | | Release date: | 2012-09-26 | | Last modified: | 2024-02-28 | | Method: | X-RAY DIFFRACTION (1.7 Å) | | Cite: | Insights into phosphate cooperativity and influence of substrate modifications on binding and catalysis of hexameric purine nucleoside phosphorylases.
Plos One, 7, 2012
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