Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
4OKJ
DownloadVisualize
BU of 4okj by Molmil
Crystal structure of RNase AS from M tuberculosis
分子名称: 3'-5' exoribonuclease Rv2179c/MT2234.1, MAGNESIUM ION
著者Romano, M, van de Weerd, R, Brouwer, F.C.C, Roviello, G.N, Lacroix, R, Sparrius, M, van den Brink-van Stempvoort, G, Maaskant, J.J, van der Sar, A.M, Appelmelk, B.J, Geurtsen, J.J, Berisio, R.
登録日2014-01-22
公開日2014-05-21
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Structure and Function of RNase AS, a Polyadenylate-Specific Exoribonuclease Affecting Mycobacterial Virulence In Vivo
Structure, 22, 2014
4OKK
DownloadVisualize
BU of 4okk by Molmil
Crystal structure of RNase AS from M tuberculosis in complex with UMP
分子名称: 3'-5' exoribonuclease Rv2179c/MT2234.1, MAGNESIUM ION, URIDINE-5'-MONOPHOSPHATE
著者Romano, M, van de Weerd, R, Brouwer, F.C.C, Roviello, G.N, Lacroix, R, Sparrius, M, van den Brink-van Stempvoort, G, Maaskant, J.J, van der Sar, A.M, Appelmelk, B.J, Geurtsen, J.J, Berisio, R.
登録日2014-01-22
公開日2014-05-21
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.21 Å)
主引用文献Structure and Function of RNase AS, a Polyadenylate-Specific Exoribonuclease Affecting Mycobacterial Virulence In Vivo
Structure, 22, 2014
5LKW
DownloadVisualize
BU of 5lkw by Molmil
Crystal structure of the peptidoglycan-associated lipoprotein (Pal) from Burkholderia cepacia in complex with DAP
分子名称: 2,6-DIAMINOPIMELIC ACID, Putative OmpA family lipoprotein
著者Romano, M, Ruggiero, A, Berisio, R.
登録日2016-07-25
公開日2017-08-16
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献The Burkholderia cenocepacia peptidoglycan-associated lipoprotein is involved in epithelial cell attachment and elicitation of inflammation.
Cell. Microbiol., 19, 2017
4OKE
DownloadVisualize
BU of 4oke by Molmil
Structure of RNase AS, a polyadenylate-specific exoribonuclease affecting mycobacterial virulence in vivo
分子名称: 3'-5' exoribonuclease Rv2179c/MT2234.1, ADENOSINE MONOPHOSPHATE, MAGNESIUM ION
著者Berisio, R, Romano, M.
登録日2014-01-22
公開日2014-05-21
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Structure and Function of RNase AS, a Polyadenylate-Specific Exoribonuclease Affecting Mycobacterial Virulence In Vivo
Structure, 22, 2014
6YO1
DownloadVisualize
BU of 6yo1 by Molmil
Crystal structure of ribonuclease A solved by vanadium SAD phasing
分子名称: Ribonuclease pancreatic, URIDINE-2',3'-VANADATE
著者El Omari, K, Mohamad, N, Bountra, K, Duman, R, Romano, M, Schlegel, K, Kwong, H, Mykhaylyk, V, Olesen, C.E, Moller, J.V, Bublitz, M, Beis, K, Wagner, A.
登録日2020-04-14
公開日2020-11-04
最終更新日2020-12-02
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Experimental phasing with vanadium and application to nucleotide-binding membrane proteins.
Iucrj, 7, 2020
6YSO
DownloadVisualize
BU of 6yso by Molmil
Crystal structure of the (SR) Ca2+-ATPase solved by vanadium SAD phasing
分子名称: CHLORIDE ION, MAGNESIUM ION, OCTANOIC ACID [3S-[3ALPHA, ...
著者El Omari, K, Mohamad, N, Bountra, K, Duman, R, Romano, M, Schlegel, K, Kwong, H, Mykhaylyk, V, Olesen, C.E, Moller, J.V, Bublitz, M, Beis, K, Wagner, A.
登録日2020-04-22
公開日2020-11-04
最終更新日2020-12-02
実験手法X-RAY DIFFRACTION (3.13 Å)
主引用文献Experimental phasing with vanadium and application to nucleotide-binding membrane proteins.
Iucrj, 7, 2020
4KL7
DownloadVisualize
BU of 4kl7 by Molmil
Crystal structure of the catalytic domain of RpfB from Mycobacterium tuberculosis
分子名称: Resuscitation-promoting factor RpfB, SULFATE ION
著者Squeglia, F, Romano, M, Ruggiero, A, Berisio, R.
登録日2013-05-07
公開日2013-06-26
実験手法X-RAY DIFFRACTION (1.45 Å)
主引用文献Carbohydrate Recognition by RpfB from Mycobacterium tuberculosis Unveiled by Crystallographic and Molecular Dynamics Analyses.
Biophys.J., 104, 2013
5E27
DownloadVisualize
BU of 5e27 by Molmil
The structure of Resuscitation Promoting Factor B from M. tuberculosis reveals unexpected ubiquitin-like domains
分子名称: Resuscitation-promoting factor RpfB
著者Ruggiero, A, Squeglia, F, Romano, M, Vitagliano, L, De Simone, A, Berisio, R.
登録日2015-09-30
公開日2015-11-18
最終更新日2015-12-23
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献The structure of Resuscitation promoting factor B from M. tuberculosis reveals unexpected ubiquitin-like domains.
Biochim.Biophys.Acta, 1860, 2015
8PX0
DownloadVisualize
BU of 8px0 by Molmil
Structure of ribonuclease A, solved at wavelength 2.75 A
分子名称: L-URIDINE-5'-MONOPHOSPHATE, Ribonuclease pancreatic
著者El Omari, K, Duman, R, Mykhaylyk, V, Orr, C, Romano, M, Beis, K, Wagner, A.
登録日2023-07-22
公開日2023-10-25
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Experimental phasing opportunities for macromolecular crystallography at very long wavelengths.
Commun Chem, 6, 2023
8PWN
DownloadVisualize
BU of 8pwn by Molmil
Structure of A2A adenosine receptor A2AR-StaR2-bRIL, solved at wavelength 2.75 A
分子名称: Adenosine receptor A2a,Soluble cytochrome b562, CHOLESTEROL, OLEIC ACID, ...
著者El Omari, K, Duman, R, Mykhaylyk, V, Orr, C, Romano, M, Moraes, I, Wagner, A.
登録日2023-07-20
公開日2023-10-25
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Experimental phasing opportunities for macromolecular crystallography at very long wavelengths.
Commun Chem, 6, 2023
4Q4N
DownloadVisualize
BU of 4q4n by Molmil
Structure of the Resuscitation Promoting Factor Interacting protein RipA mutated at H432
分子名称: Peptidoglycan endopeptidase RipA
著者Squeglia, F, Ruggiero, A, Romano, M, Vitagliano, L, Berisio, R.
登録日2014-04-15
公開日2014-09-10
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.38 Å)
主引用文献Mutational and structural study of RipA, a key enzyme in Mycobacterium tuberculosis cell division: evidence for the L-to-D inversion of configuration of the catalytic cysteine.
Acta Crystallogr.,Sect.D, 70, 2014
4Q4T
DownloadVisualize
BU of 4q4t by Molmil
Structure of the Resuscitation Promoting Factor Interacting protein RipA mutated at E444
分子名称: FORMIC ACID, GLYCEROL, Peptidoglycan endopeptidase RipA
著者Squeglia, F, Ruggiero, A, Romano, M, Vitagliano, L, Berisio, R.
登録日2014-04-15
公開日2014-09-10
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.63 Å)
主引用文献Mutational and structural study of RipA, a key enzyme in Mycobacterium tuberculosis cell division: evidence for the L-to-D inversion of configuration of the catalytic cysteine.
Acta Crystallogr.,Sect.D, 70, 2014
6RCK
DownloadVisualize
BU of 6rck by Molmil
Crystal structure of the OmpK36 GD insertion chimera from Klebsiella pneumonia
分子名称: (2S)-3-{[{[(2S)-2,3-DIHYDROXYPROPYL]OXY}(HYDROXY)PHOSPHORYL]OXY}-2-[(6E)-HEXADEC-6-ENOYLOXY]PROPYL (8E)-OCTADEC-8-ENOATE, (HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE, LAURYL DIMETHYLAMINE-N-OXIDE, ...
著者Beis, K, Romano, M, Kwong, J.
登録日2019-04-11
公開日2019-09-11
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.029 Å)
主引用文献OmpK36-mediated Carbapenem resistance attenuates ST258 Klebsiella pneumoniae in vivo.
Nat Commun, 10, 2019
6RCP
DownloadVisualize
BU of 6rcp by Molmil
Crystal structure of the OmpK36 clinical isolate ST258 from Klebsiella pneumonia
分子名称: OmpK36
著者Beis, K, Romano, M, Kwong, J.
登録日2019-04-11
公開日2019-09-11
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (3.231 Å)
主引用文献OmpK36-mediated Carbapenem resistance attenuates ST258 Klebsiella pneumoniae in vivo.
Nat Commun, 10, 2019
6RD3
DownloadVisualize
BU of 6rd3 by Molmil
Crystal structure of the wild type OmpK36 from Klebsiella pneumonia
分子名称: (HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE, MAGNESIUM ION, OmpK36
著者Beis, K, Romano, M, Kwong, J.
登録日2019-04-12
公開日2019-09-11
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.98 Å)
主引用文献OmpK36-mediated Carbapenem resistance attenuates ST258 Klebsiella pneumoniae in vivo.
Nat Commun, 10, 2019
6S0M
DownloadVisualize
BU of 6s0m by Molmil
Structural and dynamic studies provide insights into specificity and allosteric regulation of Ribonuclease AS, a key enzyme in mycobacterial virulence
分子名称: 3'-5' exoribonuclease, MAGNESIUM ION, RNA (5'-R(P*G)-3')
著者Berisio, R, Romano, M.
登録日2019-06-17
公開日2019-08-28
最終更新日2020-05-13
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structural and dynamic studies provide insights into specificity and allosteric regulation of ribonuclease as, a key enzyme in mycobacterial virulence.
J.Biomol.Struct.Dyn., 38, 2020
6GVX
DownloadVisualize
BU of 6gvx by Molmil
Crystal structure of Maternal Embryonic Leucine Zipper Kinase (MELK) in complex with dorsomorphin (Compound C)
分子名称: 1,2-ETHANEDIOL, 6-[4-(2-piperidin-1-ylethoxy)phenyl]-3-pyridin-4-ylpyrazolo[1,5-a]pyrimidine, Maternal embryonic leucine zipper kinase
著者Golik, P, Rembacz, K.P, Zrubek, K, Romanowska, M, Bugusz, J, Wladyka, B, Dubin, G.
登録日2018-06-21
公開日2019-05-29
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.24 Å)
主引用文献Crystal structure of Maternal Embryonic Leucine Zipper Kinase (MELK) in complex with dorsomorphin (Compound C).
Arch.Biochem.Biophys., 671, 2019
4KPM
DownloadVisualize
BU of 4kpm by Molmil
Crystal structure of the catalytic domain of RpfB from Mycobacterium tuberculosis in complex with triNAG
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, BENZAMIDINE, Resuscitation-promoting factor RpfB, ...
著者Squeglia, F, Ruggiero, A, Berisio, R.
登録日2013-05-14
公開日2013-06-26
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (1.33 Å)
主引用文献Carbohydrate Recognition by RpfB from Mycobacterium tuberculosis Unveiled by Crystallographic and Molecular Dynamics Analyses.
Biophys.J., 104, 2013
8PXC
DownloadVisualize
BU of 8pxc by Molmil
Structure of Fap1, a domain of the accessory Sec-dependent serine-rich glycoprotein adhesin from Streptococcus oralis, solved at wavelength 3.06 A
分子名称: 1,2-ETHANEDIOL, CALCIUM ION, Fap1
著者El Omari, K, Duman, R, Mykhaylyk, V, Orr, C, Owen, C.D, Walsh, M.A, Wagner, A.
登録日2023-07-23
公開日2023-10-25
実験手法X-RAY DIFFRACTION (1.973 Å)
主引用文献Experimental phasing opportunities for macromolecular crystallography at very long wavelengths.
Commun Chem, 6, 2023
8PX9
DownloadVisualize
BU of 8px9 by Molmil
Structure of the antibacterial peptide ABC transporter McjD, solved at wavelength 2.75 A
分子名称: MAGNESIUM ION, Microcin-J25 export ATP-binding/permease protein McjD, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER
著者El Omari, K, Duman, R, Mykhaylyk, V, Orr, C, Bountra, K, Beis, K, Wagner, A.
登録日2023-07-22
公開日2023-10-25
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Experimental phasing opportunities for macromolecular crystallography at very long wavelengths.
Commun Chem, 6, 2023
8PX5
DownloadVisualize
BU of 8px5 by Molmil
Structure of the RNA recognition motif (RRM) of Seb1 from S. pombe., solved at wavelength 2.75 A
分子名称: Rpb7-binding protein seb1
著者El Omari, K, Duman, R, Mykhaylyk, V, Orr, C, Wittmann, S, Renner, M, Grimes, J.M, Wagner, A.
登録日2023-07-22
公開日2023-10-25
実験手法X-RAY DIFFRACTION (1.77 Å)
主引用文献Experimental phasing opportunities for macromolecular crystallography at very long wavelengths.
Commun Chem, 6, 2023
8PX4
DownloadVisualize
BU of 8px4 by Molmil
Structure of the PAS domain code by the LIC_11128 gene from Leptospira interrogans serovar Copenhageni Fiocruz, solved at wavelength 3.09 A
分子名称: Diguanylate cyclase
著者El Omari, K, Duman, R, Mykhaylyk, V, Orr, C, Guzzo, C.R, Owens, R.J, Wagner, A.
登録日2023-07-22
公開日2023-10-25
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Experimental phasing opportunities for macromolecular crystallography at very long wavelengths.
Commun Chem, 6, 2023
8PXG
DownloadVisualize
BU of 8pxg by Molmil
Structure of Streptactin, solved at wavelength 2.75 A
分子名称: CHLORIDE ION, GLYCEROL, Streptavidin
著者El Omari, K, Duman, R, Mykhaylyk, V, Orr, C, Vecchia, L, Jones, E.Y, Wagner, A.
登録日2023-07-23
公開日2023-10-25
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Experimental phasing opportunities for macromolecular crystallography at very long wavelengths.
Commun Chem, 6, 2023
8PX1
DownloadVisualize
BU of 8px1 by Molmil
Structure of salmonella effector SseK3, solved at wavelength 2.75 A
分子名称: Non-LEE encoded effector protein NleB
著者El Omari, K, Duman, R, Mykhaylyk, V, Orr, C.M, Esposito, D, Rittinger, K, Wagner, A.
登録日2023-07-22
公開日2023-10-25
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Experimental phasing opportunities for macromolecular crystallography at very long wavelengths.
Commun Chem, 6, 2023
8PX7
DownloadVisualize
BU of 8px7 by Molmil
Structure of Bacterial Multidrug Efflux transporter AcrB, solved at wavelength 3.02 A
分子名称: Multidrug efflux pump subunit AcrB
著者El Omari, K, Duman, R, Mykhaylyk, V, Orr, C, Qu, F, Beis, K, Wagner, A.
登録日2023-07-22
公開日2023-10-25
実験手法X-RAY DIFFRACTION (3.4 Å)
主引用文献Experimental phasing opportunities for macromolecular crystallography at very long wavelengths.
Commun Chem, 6, 2023

 

12>

219140

件を2024-05-01に公開中

PDB statisticsPDBj update infoContact PDBjnumon