124D
 
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169D
 | | THE SOLUTION STRUCTURE OF THE R(GCG)D(TATACCC):D(GGGTATACGC) OKAZAKI FRAGMENT CONTAINS TWO DISTINCT DUPLEX MORPHOLOGIES CONNECTED BY A JUNCTION | | Descriptor: | DNA (5'-D(*GP*GP*GP*TP*AP*TP*AP*CP*GP*C)-3'), DNA/RNA (5'-R(*GP*CP*G)-D(P*TP*AP*TP*AP*CP*CP*C)-3') | | Authors: | Salazar, M, Fedoroff, O.Y, Zhu, L, Reid, B.R. | | Deposit date: | 1994-04-11 | | Release date: | 1994-07-31 | | Last modified: | 2024-05-22 | | Method: | SOLUTION NMR | | Cite: | The solution structure of the r(gcg)d(TATACCC):d(GGGTATACGC) Okazaki fragment contains two distinct duplex morphologies connected by a junction.
J.Mol.Biol., 241, 1994
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132D
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1GTC
 | | HUMAN IMMUNODEFICIENCY VIRUS-1 OKAZAKI FRAGMENT, DNA-RNA CHIMERA, NMR, 11 STRUCTURES | | Descriptor: | DNA (5'-D(*GP*CP*AP*GP*TP*GP*GP*C)-3'), DNA/RNA (5'-R(*GP*CP*CP*A)-D(P*CP*TP*GP*C)-3') | | Authors: | Fedoroff, O.Y, Salazar, M, Reid, B.R. | | Deposit date: | 1996-06-13 | | Release date: | 1996-12-23 | | Last modified: | 2024-05-22 | | Method: | SOLUTION NMR | | Cite: | Structural variation among retroviral primer-DNA junctions: solution structure of the HIV-1 (-)-strand Okazaki fragment r(gcca)d(CTGC).d(GCAGTGGC).
Biochemistry, 35, 1996
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1ZHU
 | | DNA (5'-D(*CP*AP*AP*TP*GP*CP*AP*AP*TP*G)-3'), NMR, 10 STRUCTURES | | Descriptor: | DNA (5'-D(*CP*AP*AP*TP*GP*CP*AP*AP*TP*G)-3') | | Authors: | Zhu, L, Chou, S.-H, Xu, J, Reid, B.R. | | Deposit date: | 1996-01-24 | | Release date: | 1996-07-11 | | Last modified: | 2024-05-22 | | Method: | SOLUTION NMR | | Cite: | Structure of a single-cytidine hairpin loop formed by the DNA triplet GCA.
Nat.Struct.Biol., 2, 1995
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1XUE
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1OKA
 | | RNA/DNA CHIMERA, NMR | | Descriptor: | RNA/DNA CHIMERA (R(CCCA)D(AATGA)(DOT)D(TCATTTGGG)) | | Authors: | Salazar, M, Fedoroff, O.Y, Reid, B.R. | | Deposit date: | 1996-04-19 | | Release date: | 1996-11-08 | | Last modified: | 2024-05-22 | | Method: | SOLUTION NMR | | Cite: | Structure of chimeric duplex junctions: solution conformation of the retroviral Okazaki-like fragment r(ccca)d(AATGA).d(TCATTTGGG) from Moloney murine leukemia virus.
Biochemistry, 35, 1996
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1NXR
 | | HIV-1 POLYPURINE HYBRID, R(GAGGACUG):D(CAGTCCTC), NMR, 18 STRUCTURES | | Descriptor: | DNA (5'-D(*CP*AP*GP*TP*CP*CP*TP*C)-3'), RNA (5'-R(*GP*AP*GP*GP*AP*CP*UP*G)-3') | | Authors: | Fedoroff, O.Y, Ge, Y, Reid, B.R. | | Deposit date: | 1997-02-21 | | Release date: | 1997-07-07 | | Last modified: | 2024-05-22 | | Method: | SOLUTION NMR | | Cite: | Solution structure of r(gaggacug):d(CAGTCCTC) hybrid: implications for the initiation of HIV-1 (+)-strand synthesis.
J.Mol.Biol., 269, 1997
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1S9N
 | | Solution structure of the nitrous acid (G)-(G) cross-linked DNA dodecamer duplex GCATCC(G)GATGC | | Descriptor: | 5'-D(*GP*CP*AP*TP*CP*CP*GP*GP*AP*TP*GP*C)-3' | | Authors: | Edfeldt, N.B.F, Harwood, E.A, Sigurdsson, S.T, Hopkins, P.B, Reid, B.R. | | Deposit date: | 2004-02-05 | | Release date: | 2005-06-21 | | Last modified: | 2024-05-22 | | Method: | SOLUTION NMR | | Cite: | Solution structure of a nitrous acid induced DNA interstrand cross-link
Nucleic Acids Res., 32, 2004
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1S9O
 | | Solution structure of the nitrous acid induced DNA interstrand cross-linked dodecamer duplex CGCTAC(G)TAGCG with the cross-linked guanines denoted (G) | | Descriptor: | 5'-D(*CP*GP*CP*TP*AP*CP*GP*TP*AP*GP*CP*G)-3' | | Authors: | Edfeldt, N.B, Harwood, E.A, Sigurdsson, S.T, Hopkins, P.B, Reid, B.R. | | Deposit date: | 2004-02-05 | | Release date: | 2005-11-01 | | Last modified: | 2024-05-22 | | Method: | SOLUTION NMR | | Cite: | Solution structure of a nitrous acid induced DNA interstrand cross-link.
Nucleic Acids Res., 32, 2004
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1CX3
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1C11
 | | INTERCALATED D(TCCCGTTTCCA) DIMER, NMR, 7 STRUCTURES | | Descriptor: | DNA (5'-D(*TP*CP*CP*CP*GP*TP*TP*TP*CP*CP*A)-3') | | Authors: | Gallego, J, Chou, S.H, Reid, B.R. | | Deposit date: | 1998-07-15 | | Release date: | 1998-07-22 | | Last modified: | 2024-05-22 | | Method: | SOLUTION NMR | | Cite: | Centromeric pyrimidine strands fold into an intercalated motif by forming a double hairpin with a novel T:G:G:T tetrad: solution structure of the d(TCCCGTTTCCA) dimer.
J.Mol.Biol., 273, 1997
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104D
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103D
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1D68
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175D
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1D69
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1DDP
 | | Solution structure of a CISPLATIN-INDUCED [CATAGCTATG]2 Interstrand cross-link | | Descriptor: | Cisplatin, DNA (5'-D(*CP*AP*TP*AP*GP*CP*TP*AP*TP*G)-3') | | Authors: | Zhu, L, Huang, H, Reid, B.R, Drobny, G.P, Hopkins, P.B. | | Deposit date: | 1995-10-26 | | Release date: | 1996-03-08 | | Last modified: | 2024-03-13 | | Method: | SOLUTION NMR | | Cite: | Solution structure of a cisplatin-induced DNA interstrand cross-link.
Science, 270, 1995
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1BJH
 | | HAIRPIN LOOPS CONSISTING OF SINGLE ADENINE RESIDUES CLOSED BY SHEARED A(DOT)A AND G(DOT)G PAIRS FORMED BY THE DNA TRIPLETS AAA AND GAG: SOLUTION STRUCTURE OF THE D(GTACAAAGTAC) HAIRPIN, NMR, 16 STRUCTURES | | Descriptor: | DNA (5'-D(*GP*TP*AP*CP*AP*AP*AP*GP*TP*AP*C)-3') | | Authors: | Chou, S.-H, Zhu, L, Gao, Z, Cheng, J.-W, Reid, B.R. | | Deposit date: | 1997-07-25 | | Release date: | 1997-12-03 | | Last modified: | 2024-05-22 | | Method: | SOLUTION NMR | | Cite: | Hairpin loops consisting of single adenine residues closed by sheared A.A and G.G pairs formed by the DNA triplets AAA and GAG: solution structure of the d(GTACAAAGTAC) hairpin.
J.Mol.Biol., 264, 1996
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2TS1
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1TYC
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1TYD
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1TYA
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1TYB
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3TS1
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