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New crystal form of HIV-1 Protease/Saquinavir structure reveals carbamylation of N-terminal proline
分子名称:	(2S)-N-[(2S,3R)-4-[(2S,3S,4aS,8aS)-3-(tert-butylcarbamoyl)-3,4,4a,5,6,7,8,8a-octahydro-1H-isoquinolin-2-yl]-3-hydroxy-1 -phenyl-butan-2-yl]-2-(quinolin-2-ylcarbonylamino)butanediamide, CHLORIDE ION, DIMETHYL SULFOXIDE, ...
著者	Olajuyigbe, F.M, Demitri, N, Ajele, J.O, Maurizio, E, Randaccio, L, Geremia, S.
登録日	2009-10-06
公開日	2010-06-09
最終更新日	2023-09-06
実験手法	X-RAY DIFFRACTION (1.39 Å)
主引用文献	Carbamylation of N-terminal proline. ACS Med Chem Lett, 1, 2010

2V3N

Crystallographic analysis of upper axial ligand substitutions in cobalamin bound to transcobalamin
分子名称:	CHLORIDE ION, COBALAMIN, CYANIDE ION, ...
著者	Wuerges, J, Geremia, S, Randaccio, L.
登録日	2007-06-19
公開日	2007-10-30
最終更新日	2023-12-13
実験手法	X-RAY DIFFRACTION (2.73 Å)
主引用文献	Vitamin B12 Transport Proteins: Crystallographic Analysis of Beta-Axial Ligand Substitutions in Cobalamin Bound to Transcobalamin. Iubmb Life, 59, 2007

2V3P

Crystallographic analysis of beta-axial ligand substitutions in cobalamin bound to transcobalamin
分子名称:	CHLORIDE ION, COBALAMIN, SULFITE ION, ...
著者	Wuerges, J, Geremia, S, Randaccio, L.
登録日	2007-06-19
公開日	2007-10-30
最終更新日	2023-12-13
実験手法	X-RAY DIFFRACTION (2.9 Å)
主引用文献	Vitamin B12 Transport Proteins: Crystallographic Analysis of Beta-Axial Ligand Substitutions in Cobalamin Bound to Transcobalamin. Iubmb Life, 59, 2007

1PYZ

CRYSTALLOGRAPHIC STRUCTURE OF MIMOCHROME IV
分子名称:	CHLORIDE ION, CO(III)-(DEUTEROPORPHYRIN IX), MIMOCHROME IV, ...
著者	Di Costanzo, L, Geremia, S, Randaccio, L, Nastri, F, Maglio, O, Lombardi, A, Pavone, V.
登録日	2003-07-09
公開日	2004-12-14
最終更新日	2018-06-27
実験手法	X-RAY DIFFRACTION (1.25 Å)
主引用文献	Miniaturized heme proteins: crystal structure of Co(III)-mimochrome IV. J.Biol.Inorg.Chem., 9, 2004

2BB6

Structure of Cobalamin-complexed Bovine Transcobalamin in Monoclinic Crystal Form
分子名称:	CHLORIDE ION, COBALAMIN, Transcobalamin II
著者	Wuerges, J, Garau, G, Geremia, S, Fedosov, S.N, Petersen, T.E, Randaccio, L.
登録日	2005-10-17
公開日	2006-04-04
最終更新日	2024-04-03
実験手法	X-RAY DIFFRACTION (2 Å)
主引用文献	Structural basis for mammalian vitamin B12 transport by transcobalamin. Proc.Natl.Acad.Sci.Usa, 103, 2006

2BB5

Structure of Human Transcobalamin in complex with Cobalamin
分子名称:	COBALAMIN, Transcobalamin II
著者	Wuerges, J, Garau, G, Geremia, S, Fedosov, S.N, Petersen, T.E, Randaccio, L.
登録日	2005-10-17
公開日	2006-04-04
最終更新日	2023-08-23
実験手法	X-RAY DIFFRACTION (3.2 Å)
主引用文献	Structural basis for mammalian vitamin B12 transport by transcobalamin. Proc.Natl.Acad.Sci.Usa, 103, 2006

2BBC

Structure of Cobalamin-complexed Bovine Transcobalamin in trigonal crystal form
分子名称:	CHLORIDE ION, COBALAMIN, Transcobalamin II
著者	Wuerges, J, Garau, G, Geremia, S, Fedosov, S.N, Petersen, T.E, Randaccio, L.
登録日	2005-10-17
公開日	2006-04-04
最終更新日	2023-08-23
実験手法	X-RAY DIFFRACTION (2.4 Å)
主引用文献	Structural basis for mammalian vitamin B12 transport by transcobalamin. Proc.Natl.Acad.Sci.Usa, 103, 2006

2A1E

High resolution structure of HIV-1 PR with TS-126
分子名称:	ACETATE ION, CHLORIDE ION, DIMETHYL SULFOXIDE, ...
著者	Demitri, N, Geremia, S, Randaccio, L, Wuerges, J, Benedetti, F, Berti, F, Dinon, F, Campaner, P, Tell, G.
登録日	2005-06-20
公開日	2006-02-21
最終更新日	2023-10-25
実験手法	X-RAY DIFFRACTION (1.3 Å)
主引用文献	A potent HIV protease inhibitor identified in an epimeric mixture by high-resolution protein crystallography. Chemmedchem, 1, 2006

1LT1

SLIDING HELIX INDUCED CHANGE OF COORDINATION GEOMETRY IN A MODEL DI-MN(II) PROTEIN
分子名称:	L13G-DF1, MANGANESE (II) ION
著者	Di Costanzo, L, Geremia, S.
登録日	2002-05-20
公開日	2003-05-20
最終更新日	2023-10-25
実験手法	X-RAY DIFFRACTION (1.91 Å)
主引用文献	Sliding helix and change of coordination geometry in a model di-MnII protein Angew.Chem.Int.Ed.Engl., 42, 2003

1OVU

CRYSTAL STRUCTURE OF FOUR-HELIX BUNDLE MODEL di-Co(II)-DF1-L13A (form I)
分子名称:	COBALT (II) ION, four-helix bundle model di-Co(II)-DF1-L13A (form I)
著者	Di Costanzo, L, Geremia, S.
登録日	2003-03-27
公開日	2004-04-06
最終更新日	2019-11-20
実験手法	X-RAY DIFFRACTION (3.1 Å)
主引用文献	Response of a designed metalloprotein to changes in metal ion coordination, exogenous ligands, and active site volume determined by X-ray crystallography. J.Am.Chem.Soc., 127, 2005

1OVV

CRYSTAL STRUCTURE OF FOUR-HELIX BUNDLE MODEL di-Co(II)-DF1-L13A (form II)
分子名称:	COBALT (II) ION, FOUR-HELIX BUNDLE MODEL di-Co(II)-DF1-L13A (form II)
著者	Di Costanzo, L, Geremia, S.
登録日	2003-03-27
公開日	2004-04-06
最終更新日	2019-11-20
実験手法	X-RAY DIFFRACTION (2.9 Å)
主引用文献	Response of a designed metalloprotein to changes in metal ion coordination, exogenous ligands, and active site volume determined by X-ray crystallography. J.Am.Chem.Soc., 127, 2005

1OVR

CRYSTAL STRUCTURE OF FOUR-HELIX BUNDLE MODEL di-Mn(II)-DF1-L13
分子名称:	MANGANESE (II) ION, four-helix bundle model di-Mn(II)-DF1-L13
著者	Di Costanzo, L, Geremia, S.
登録日	2003-03-27
公開日	2004-05-18
最終更新日	2017-10-11
実験手法	X-RAY DIFFRACTION (2.99 Å)
主引用文献	Response of a designed metalloprotein to changes in metal ion coordination, exogenous ligands, and active site volume determined by X-ray crystallography. J.Am.Chem.Soc., 127, 2005

1I8O

RHODOPSEUDOMONAS PALUSTRIS CYT C2 AMMONIA COMPLEX AT 1.15 ANGSTROM RESOLUTION
分子名称:	AMMONIA, CYTOCHROME C2, HEME C, ...
著者	Garau, G, Geremia, S.
登録日	2001-03-15
公開日	2001-04-04
最終更新日	2023-08-09
実験手法	X-RAY DIFFRACTION (1.15 Å)
主引用文献	Cleavage of the iron-methionine bond in c-type cytochromes: crystal structure of oxidized and reduced cytochrome c(2) from Rhodopseudomonas palustris and its ammonia complex. Protein Sci., 11, 2002

1I8P

STRUCTURE DETERMINATION OF THE FERROCYTOCHROME C2 FROM RHODOPSEUDOMONAS PALUSTRIS
分子名称:	CYTOCHROME C2, HEME C
著者	Garau, G, Geremia, S.
登録日	2001-03-15
公開日	2001-04-04
最終更新日	2023-08-09
実験手法	X-RAY DIFFRACTION (1.95 Å)
主引用文献	Cleavage of the iron-methionine bond in c-type cytochromes: crystal structure of oxidized and reduced cytochrome c(2) from Rhodopseudomonas palustris and its ammonia complex. Protein Sci., 11, 2002

1JM0

CRYSTAL STRUCTURE OF FOUR-HELIX BUNDLE MODEL
分子名称:	DIMETHYL SULFOXIDE, MANGANESE (II) ION, PROTEIN (FOUR-HELIX BUNDLE MODEL)
著者	Di Costanzo, L, Geremia, S.
登録日	2001-07-17
公開日	2002-01-16
最終更新日	2024-04-03
実験手法	X-RAY DIFFRACTION (1.7 Å)
主引用文献	Toward the de novo design of a catalytically active helix bundle: a substrate-accessible carboxylate-bridged dinuclear metal center. J.Am.Chem.Soc., 123, 2001

1JMB

CRYSTAL STRUCTURE OF FOUR-HELIX BUNDLE MODEL
分子名称:	DIMETHYL SULFOXIDE, MANGANESE (II) ION, PROTEIN (FOUR-HELIX BUNDLE MODEL)
著者	Di Costanzo, L, Geremia, S.
登録日	2001-07-18
公開日	2002-01-16
最終更新日	2024-04-03
実験手法	X-RAY DIFFRACTION (2.2 Å)
主引用文献	Toward the de novo design of a catalytically active helix bundle: a substrate-accessible carboxylate-bridged dinuclear metal center. J.Am.Chem.Soc., 123, 2001

1FJ0

STRUCTURE DETERMINATION OF THE FERRICYTOCHROME C2 FROM RHODOPSEUDOMONAS PALUSTRIS
分子名称:	CYTOCHROME C2, GLYCEROL, HEME C, ...
著者	Geremia, S.
登録日	2000-08-07
公開日	2002-01-16
最終更新日	2023-08-09
実験手法	X-RAY DIFFRACTION (1.7 Å)
主引用文献	Cleavage of the iron-methionine bond in c-type cytochromes: Crystal structure of oxidized and reduced cytochrome c(2) from Rhodopseudomonas palustris and its ammonia complex. Protein Sci., 11, 2002

1NVO

Solution structure of a four-helix bundle model, apo-DF1
分子名称:	Homodimeric Alpha2 Four-Helix Bundle
著者	Maglio, O, Nastri, F, Pavone, V, Lombardi, A, DeGrado, W.F.
登録日	2003-02-04
公開日	2003-03-25
最終更新日	2022-02-23
実験手法	SOLUTION NMR
主引用文献	Preorganization of molecular binding sites in designed diiron proteins Proc.Natl.Acad.Sci.USA, 100, 2003

3TOF

HIV-1 Protease - Epoxydic Inhibitor Complex (pH 6 - Orthorombic Crystal form P212121)
分子名称:	(S)-N-((1R,2S)-1-((2R,3R)-3-benzyloxiran-2-yl)-1-hydroxy-3-phenylpropan-2-yl)-3-methyl-2-(2-phenoxyacetamido)butanamide, ACETATE ION, DIMETHYL SULFOXIDE, ...
著者	Geremia, S, Olajuyigbe, F.M, Ajele, J.O, Demitri, N, Randaccio, L, Wuerges, J, Benedetti, L, Campaner, P, Berti, F.
登録日	2011-09-05
公開日	2012-08-15
最終更新日	2023-09-13
実験手法	X-RAY DIFFRACTION (1.45 Å)
主引用文献	Developing HIV-1 Protease Inhibitors through Stereospecific Reactions in Protein Crystals. Molecules, 21, 2016

1HH7

REFINED CRYSTAL STRUCTURE OF CYTOCHROME C2 FROM RHODOPSEUDOMONAS PALUSTRIS AT 1.4 ANGSTROM RESOLUTION
分子名称:	AMMONIA, CYTOCHROME C2, HEME C, ...
著者	Garau, G, Geremia, S.
登録日	2000-12-21
公開日	2001-01-02
最終更新日	2023-12-13
実験手法	X-RAY DIFFRACTION (1.4 Å)
主引用文献	Crystallization and Preliminary X-Ray Analysis of Two Ph-Dependent Forms of Cytochrome C2 from Rhodopseudomonas Palustris Acta Crystallogr.,Sect.D, 56, 2000

2KIK

An artificial di-iron oxo-protein with phenol oxidase activity
分子名称:	Artificial diiron protein, ZINC ION
著者	Maglio, O, Lombardi, A.
登録日	2009-05-06
公開日	2009-11-10
最終更新日	2022-03-16
実験手法	SOLUTION NMR
主引用文献	An artificial di-iron oxo-protein with phenol oxidase activity To be Published

1EC5

CRYSTAL STRUCTURE OF FOUR-HELIX BUNDLE MODEL
分子名称:	PROTEIN (FOUR-HELIX BUNDLE MODEL), ZINC ION
著者	Geremia, S.
登録日	2000-01-25
公開日	2000-07-26
最終更新日	2024-04-03
実験手法	X-RAY DIFFRACTION (2.5 Å)
主引用文献	Inaugural article: retrostructural analysis of metalloproteins: application to the design of a minimal model for diiron proteins. Proc.Natl.Acad.Sci.USA, 97, 2000

1U7M

Solution structure of a diiron protein model: Due Ferri(II) turn mutant
分子名称:	Four-helix bundle model, ZINC ION
著者	Maglio, O, Nastri, F, Calhoun, J.R, Lahr, S, Pavone, V, DeGrado, W.F, Lombardi, A.
登録日	2004-08-04
公開日	2005-03-01
最終更新日	2022-03-02
実験手法	SOLUTION NMR
主引用文献	Analysis and Design of Turns in alpha-Helical Hairpins J.Mol.Biol., 346, 2005

1U7J

Solution structure of a diiron protein model
分子名称:	Four-helix bundle model, ZINC ION
著者	Maglio, O, Nastri, F, Calhoun, J.R, Lahr, S, Pavone, V, DeGrado, W.F, Lombardi, A.
登録日	2004-08-04
公開日	2005-03-01
最終更新日	2022-03-02
実験手法	SOLUTION NMR
主引用文献	Analysis and Design of Turns in alpha-Helical Hairpins J.Mol.Biol., 346, 2005

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