Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
3GB3
DownloadVisualize
BU of 3gb3 by Molmil
X-ray structure of genetically encoded photosensitizer KillerRed in native form
Descriptor: KillerRed, SULFATE ION
Authors:Pletnev, S, Pletneva, N.V, Pletnev, V.Z.
Deposit date:2009-02-18
Release date:2009-09-08
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Structural basis for phototoxicity of the genetically encoded photosensitizer KillerRed.
J.Biol.Chem., 284, 2009
3GL4
DownloadVisualize
BU of 3gl4 by Molmil
X-ray structure of photobleached killerred
Descriptor: KillerRed
Authors:Pletnev, S, Pletneva, N.V, Pletnev, V.Z.
Deposit date:2009-03-11
Release date:2009-09-08
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Structural basis for phototoxicity of the genetically encoded photosensitizer KillerRed.
J.Biol.Chem., 284, 2009
4EDS
DownloadVisualize
BU of 4eds by Molmil
Crystal structure of far-red fluorescent protein eqFP670
Descriptor: far-red fluorescent protein eqFP650
Authors:Pletnev, S, Pletnev, V.Z, Pletneva, N.V.
Deposit date:2012-03-27
Release date:2012-09-05
Last modified:2013-03-27
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structural basis for bathochromic shift of fluorescence in far-red fluorescent proteins eqFP650 and eqFP670.
Acta Crystallogr.,Sect.D, 68, 2012
4EDO
DownloadVisualize
BU of 4edo by Molmil
Crystal structure of far-red fluorescent protein eqFP650
Descriptor: far-red fluorescent protein eqFP650
Authors:Pletnev, S, Pletnev, V.Z, Pletneva, N.V.
Deposit date:2012-03-27
Release date:2012-09-05
Last modified:2013-03-27
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural basis for bathochromic shift of fluorescence in far-red fluorescent proteins eqFP650 and eqFP670.
Acta Crystallogr.,Sect.D, 68, 2012
4Q7R
DownloadVisualize
BU of 4q7r by Molmil
Crystal structure of large Stokes shift fluorescent protein LSSmOrange
Descriptor: ACETATE ION, LSSmOrange, ZINC ION
Authors:Pletnev, S, Dauter, Z.
Deposit date:2014-04-25
Release date:2014-07-09
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Orange Fluorescent Proteins: Structural Studies of LSSmOrange, PSmOrange and PSmOrange2.
Plos One, 9, 2014
3BX9
DownloadVisualize
BU of 3bx9 by Molmil
Monomeric Far-red Fluorescent Protein mKate Crystallized at pH 2.0
Descriptor: CITRIC ACID, Far-red fluorescent protein mKate, GLYCEROL
Authors:Pletnev, S, Pletneva, N, Pletnev, V.
Deposit date:2008-01-11
Release date:2008-07-22
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:A Crystallographic Study of Bright Far-Red Fluorescent Protein mKate Reveals pH-induced cis-trans Isomerization of the Chromophore.
J.Biol.Chem., 283, 2008
3BXA
DownloadVisualize
BU of 3bxa by Molmil
Monomeric Far-red Fluorescent Protein mKate Crystallized at pH 4.2
Descriptor: CITRIC ACID, Far-red fluorescent protein mKate
Authors:Pletnev, S, Pletneva, N, Pletnev, V.
Deposit date:2008-01-12
Release date:2008-07-22
Last modified:2017-10-25
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:A Crystallographic Study of Bright Far-Red Fluorescent Protein mKate Reveals pH-induced cis-trans Isomerization of the Chromophore.
J.Biol.Chem., 283, 2008
3BXC
DownloadVisualize
BU of 3bxc by Molmil
Monomeric Far-red Fluorescent Protein mKate Crystallized at pH 9.0
Descriptor: Far-red fluorescent protein mKate
Authors:Pletnev, S, Pletneva, N, Pletnev, V.
Deposit date:2008-01-12
Release date:2008-07-22
Last modified:2019-07-24
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:A Crystallographic Study of Bright Far-Red Fluorescent Protein mKate Reveals pH-induced cis-trans Isomerization of the Chromophore.
J.Biol.Chem., 283, 2008
3H1R
DownloadVisualize
BU of 3h1r by Molmil
Order-disorder structure of fluorescent protein FP480
Descriptor: Fluorescent protein FP480
Authors:Pletnev, S, Morozova, K.S, Verkhusha, V.V, Dauter, Z.
Deposit date:2009-04-13
Release date:2009-09-08
Last modified:2017-11-01
Method:X-RAY DIFFRACTION (2.41 Å)
Cite:Rotational order-disorder structure of fluorescent protein FP480
Acta Crystallogr.,Sect.D, 65, 2009
3BXB
DownloadVisualize
BU of 3bxb by Molmil
Monomeric Far-red Fluorescent Protein mKate Crystallized at pH 7.0
Descriptor: Far-red fluorescent protein mKate
Authors:Pletnev, S, Pletneva, N, Pletnev, V.
Deposit date:2008-01-12
Release date:2008-07-22
Last modified:2019-07-24
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:A Crystallographic Study of Bright Far-Red Fluorescent Protein mKate Reveals pH-induced cis-trans Isomerization of the Chromophore.
J.Biol.Chem., 283, 2008
3H1O
DownloadVisualize
BU of 3h1o by Molmil
The Structure of Fluorescent Protein FP480
Descriptor: Fluorescent protein FP480, GLYCEROL
Authors:Pletnev, S, Morozova, K.S, Verkhusha, V.V, Dauter, Z.
Deposit date:2009-04-13
Release date:2009-09-08
Last modified:2017-11-01
Method:X-RAY DIFFRACTION (2 Å)
Cite:Rotational order-disorder structure of fluorescent protein FP480
Acta Crystallogr.,Sect.D, 65, 2009
8SXC
DownloadVisualize
BU of 8sxc by Molmil
Crystal Structure of Fluorescent Protein Fusion Red 2
Descriptor: Far-red Fluorescent Protein Fusion Red 2, GLYCEROL, HEXAETHYLENE GLYCOL, ...
Authors:Pletnev, S, Pletneva, N, Pletnev, V.
Deposit date:2023-05-21
Release date:2024-02-07
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Crystal Structure of Fluorescent Protein Fusion Red 2
To Be Published
3LF4
DownloadVisualize
BU of 3lf4 by Molmil
Crystal Structure of Fluorescent Timer Precursor Blue102
Descriptor: Fluorescent Timer Precursor Blue102
Authors:Pletnev, S, Dauter, Z.
Deposit date:2010-01-15
Release date:2010-03-09
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.808 Å)
Cite:Understanding blue-to-red conversion in monomeric fluorescent timers and hydrolytic degradation of their chromophores
J.Am.Chem.Soc., 132, 2010
3LF3
DownloadVisualize
BU of 3lf3 by Molmil
Crystal Structure of Fast Fluorescent Timer Fast-FT
Descriptor: Fast Fluorescent Timer Fast-FT
Authors:Pletnev, S, Dauter, Z.
Deposit date:2010-01-15
Release date:2010-03-09
Last modified:2017-11-01
Method:X-RAY DIFFRACTION (1.15 Å)
Cite:Understanding blue-to-red conversion in monomeric fluorescent timers and hydrolytic degradation of their chromophores
J.Am.Chem.Soc., 132, 2010
3U8A
DownloadVisualize
BU of 3u8a by Molmil
Crystal structure of monomeric reversibly photoswitchable red fluorescent protein rsTagRFP in the OFF state
Descriptor: Fluorescent protein rsTagRFP
Authors:Pletnev, S.
Deposit date:2011-10-16
Release date:2012-02-22
Last modified:2012-05-09
Method:X-RAY DIFFRACTION (1.783 Å)
Cite:A structural basis for reversible photoswitching of absorbance spectra in red fluorescent protein rsTagRFP.
J.Mol.Biol., 417, 2012
3U8C
DownloadVisualize
BU of 3u8c by Molmil
Crystal structure of monomeric reversibly photoswitchable red fluorescent protein rsTagRFP in the ON state
Descriptor: Fluorescent protein rsTagRFP, GLYCEROL
Authors:Pletnev, S.
Deposit date:2011-10-16
Release date:2012-02-22
Last modified:2012-05-09
Method:X-RAY DIFFRACTION (2.188 Å)
Cite:A structural basis for reversible photoswitching of absorbance spectra in red fluorescent protein rsTagRFP.
J.Mol.Biol., 417, 2012
4KPI
DownloadVisualize
BU of 4kpi by Molmil
Rotational order-disorder structure of reversibly photoswitchable red fluorescent protein rsTagRFP
Descriptor: Reversibly photoswitchable red fluorescent protein rsTagRFP
Authors:Pletnev, S.
Deposit date:2013-05-13
Release date:2014-02-26
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (1.58 Å)
Cite:The rotational order-disorder structure of the reversibly photoswitchable red fluorescent protein rsTagRFP.
Acta Crystallogr.,Sect.D, 70, 2014
7LSC
DownloadVisualize
BU of 7lsc by Molmil
Crystal structure of near-infrared fluorescent protein miRFP670nano3
Descriptor: 3-[2-[(~{Z})-[5-[(~{Z})-[(3~{S},4~{R})-3-ethenyl-4-methyl-5-oxidanylidene-pyrrolidin-2-ylidene]methyl]-3-(3-hydroxy-3-oxopropyl)-4-methyl-pyrrol-2-ylidene]methyl]-5-[(~{Z})-(4-ethenyl-3-methyl-5-oxidanylidene-pyrrol-2-ylidene)methyl]-4-methyl-1~{H}-pyrrol-3-yl]propanoic acid, miRFP670nano3
Authors:Pletnev, S.
Deposit date:2021-02-18
Release date:2022-02-23
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Near-infrared fluorescent protein with enhanced brightness.
To Be Published
6U1A
DownloadVisualize
BU of 6u1a by Molmil
Crystal Structure of Fluorescent Protein FusionRed
Descriptor: CALCIUM ION, NICKEL (II) ION, Red fluorescent protein
Authors:Pletnev, S, Muslinkina, L, Pletneva, N, Pletnev, V.Z.
Deposit date:2019-08-15
Release date:2020-04-22
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.09 Å)
Cite:Two independent routes of post-translational chemistry in fluorescent protein FusionRed.
Int.J.Biol.Macromol., 155, 2020
4Q7T
DownloadVisualize
BU of 4q7t by Molmil
Crystal structure of photoswitchable fluorescent protein PSmOrange
Descriptor: PSmOrange
Authors:Malashkevich, V.N, Pletnev, S, Almo, S.C.
Deposit date:2014-04-25
Release date:2014-07-09
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (1.94 Å)
Cite:Orange Fluorescent Proteins: Structural Studies of LSSmOrange, PSmOrange and PSmOrange2.
Plos One, 9, 2014
4Q7U
DownloadVisualize
BU of 4q7u by Molmil
Crystal structure of photoswitchable fluorescent protein PSmOrange2
Descriptor: GLYCEROL, PSmOrange2
Authors:Malashkevich, V.N, Pletnev, S, Almo, S.C.
Deposit date:2014-04-25
Release date:2014-07-09
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Orange Fluorescent Proteins: Structural Studies of LSSmOrange, PSmOrange and PSmOrange2.
Plos One, 9, 2014
3PJB
DownloadVisualize
BU of 3pjb by Molmil
Crystal structure of red fluorescent protein eqFP578 crystallized at pH 4.0
Descriptor: GLYCEROL, Red fluorescent protein eqFP578
Authors:Pletnev, S, Pletneva, N.V, Pletnev, V.Z.
Deposit date:2010-11-09
Release date:2011-05-25
Last modified:2018-01-24
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Crystallographic study of red fluorescent protein eqFP578 and its far-red variant Katushka reveals opposite pH-induced isomerization of chromophore.
Protein Sci., 20, 2011
3PIB
DownloadVisualize
BU of 3pib by Molmil
Crystal structure of red fluorescent protein eqFP578 crystallized at pH 5.5
Descriptor: GLYCEROL, eqFP578 fluorescent protein
Authors:Pletnev, S, Pletneva, N.V, Pletnev, V.Z.
Deposit date:2010-11-05
Release date:2011-05-25
Last modified:2012-02-22
Method:X-RAY DIFFRACTION (1.154 Å)
Cite:Crystallographic study of red fluorescent protein eqFP578 and its far-red variant Katushka reveals opposite pH-induced isomerization of chromophore.
Protein Sci., 20, 2011
3PJ7
DownloadVisualize
BU of 3pj7 by Molmil
Crystal structure of far-red fluorescent protein Katushka crystallized at pH 8.5
Descriptor: Red fluorescent protein eqFP578
Authors:Pletnev, S, Pletneva, N.V, Pletnev, V.Z.
Deposit date:2010-11-08
Release date:2011-05-25
Last modified:2012-02-22
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Crystallographic study of red fluorescent protein eqFP578 and its far-red variant Katushka reveals opposite pH-induced isomerization of chromophore.
Protein Sci., 20, 2011
3PJ5
DownloadVisualize
BU of 3pj5 by Molmil
Crystal structure of far-red fluorescent protein Katushka crystallized at pH 5.0
Descriptor: Red fluorescent protein eqFP578, SULFATE ION
Authors:Pletnev, S, Pletneva, N.V, Pletnev, V.Z.
Deposit date:2010-11-08
Release date:2011-05-25
Last modified:2012-02-22
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Crystallographic study of red fluorescent protein eqFP578 and its far-red variant Katushka reveals opposite pH-induced isomerization of chromophore.
Protein Sci., 20, 2011

222036

PDB entries from 2024-07-03

PDB statisticsPDBj update infoContact PDBjnumon