Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
5GAI
DownloadVisualize
BU of 5gai by Molmil
Probabilistic Structural Models of Mature P22 Bacteriophage Portal, Hub, and Tailspike proteins
Descriptor: Peptidoglycan hydrolase gp4, Portal protein, Tail fiber protein
Authors:Pintilie, G, Chen, D.H, Haase-Pettingell, C.A, King, J.A, Chiu, W.
Deposit date:2015-12-01
Release date:2016-02-17
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (10.5 Å)
Cite:Resolution and Probabilistic Models of Components in CryoEM Maps of Mature P22 Bacteriophage.
Biophys.J., 110, 2016
6OJN
DownloadVisualize
BU of 6ojn by Molmil
Comparative Model of SGIV Major Coat Protein (MCP) Trimer Based on Cryo-EM Map
Descriptor: Major capsid protein
Authors:Pintilie, G, Chen, D.-H, Tran, B.N, Jakana, J, Wu, J, Hew, C.L, Chiu, W.
Deposit date:2019-04-11
Release date:2019-06-12
Last modified:2024-03-20
Method:ELECTRON MICROSCOPY (8.6 Å)
Cite:Segmentation and Comparative Modeling in an 8.6- angstrom Cryo-EM Map of the Singapore Grouper Iridovirus.
Structure, 27, 2019
8FR7
DownloadVisualize
BU of 8fr7 by Molmil
A hinge glycan regulates spike bending and impacts coronavirus infectivity
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein, alpha-D-mannopyranose-(1-2)-alpha-D-mannopyranose-(1-2)-[alpha-D-mannopyranose-(1-3)]alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-2)-alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Pintilie, G, Wilson, E, Chmielewski, D, Schmid, M.F, Jin, J, Chen, M, Singharoy, A, Chiu, W.
Deposit date:2023-01-06
Release date:2023-10-04
Last modified:2024-10-16
Method:ELECTRON MICROSCOPY (3.39 Å)
Cite:Structural insights into the modulation of coronavirus spike tilting and infectivity by hinge glycans.
Nat Commun, 14, 2023
9MWZ
DownloadVisualize
BU of 9mwz by Molmil
Cryo-EM Structure of Human Enterovirus D68 USA/IL/14-18952
Descriptor: viral protein 1, viral protein 2, viral protein 3, ...
Authors:Xu, L, Pintilie, G, Varanese, L, Carette, J.E, Chiu, W.
Deposit date:2025-01-17
Release date:2025-03-26
Last modified:2025-04-02
Method:ELECTRON MICROSCOPY (2 Å)
Cite:MFSD6 is an entry receptor for enterovirus D68
Nature, 2025
9MXC
DownloadVisualize
BU of 9mxc by Molmil
Cryo-EM Structure of Human Enterovirus D68 USA/IL/14-18952 in Complex with Fc-MFSD6(L3)
Descriptor: Major facilitator superfamily domain-containing protein 6, SODIUM ION, alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Xu, L, Pintilie, G, Varanese, L, Carette, J.E, Chiu, W.
Deposit date:2025-01-18
Release date:2025-03-26
Last modified:2025-04-02
Method:ELECTRON MICROSCOPY (2.1 Å)
Cite:MFSD6 is an entry receptor for enterovirus D68
Nature, 2025
6M0S
DownloadVisualize
BU of 6m0s by Molmil
3.6A Yeast Vo state3 prime
Descriptor: Uncharacterized protein YPR170W-B, V-type proton ATPase subunit a, vacuolar isoform, ...
Authors:Roh, S.H, Shekhar, M, Pintilie, G, Chipot, C, Wilkens, S, SIngharoy, A, Chiu, W.
Deposit date:2020-02-22
Release date:2020-11-04
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:Cryo-EM and MD infer water-mediated proton transport and autoinhibition mechanisms of V o complex.
Sci Adv, 6, 2020
6M0R
DownloadVisualize
BU of 6m0r by Molmil
2.7A Yeast Vo state3
Descriptor: (6~{E},10~{E},14~{E},18~{E},22~{E},26~{E},30~{R})-2,6,10,14,18,22,26,30-octamethyldotriaconta-2,6,10,14,18,22,26-heptaene, 1,2-dioleoyl-sn-glycero-3-phosphoethanolamine, PYROPHOSPHATE, ...
Authors:Roh, S.H, Shekhar, M, Pintilie, G, Chipot, C, Wilkens, S, Singharoy, A, Chiu, W.
Deposit date:2020-02-22
Release date:2020-11-04
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (2.7 Å)
Cite:Cryo-EM and MD infer water-mediated proton transport and autoinhibition mechanisms of V o complex.
Sci Adv, 6, 2020
6UES
DownloadVisualize
BU of 6ues by Molmil
Apo SAM-IV Riboswitch
Descriptor: RNA (119-MER)
Authors:Zhang, K, Li, S, Kappel, K, Pintilie, G, Su, Z, Mou, T, Schmid, M, Das, R, Chiu, W.
Deposit date:2019-09-23
Release date:2019-12-18
Last modified:2024-03-20
Method:ELECTRON MICROSCOPY (3.7 Å)
Cite:Cryo-EM structure of a 40 kDa SAM-IV riboswitch RNA at 3.7 angstrom resolution.
Nat Commun, 10, 2019
6UET
DownloadVisualize
BU of 6uet by Molmil
SAM-bound SAM-IV riboswitch
Descriptor: RNA (119-MER), S-ADENOSYLMETHIONINE
Authors:Zhang, K, Li, S, Kappel, K, Pintilie, G, Su, Z, Mou, T, Schmid, M, Das, R, Chiu, W.
Deposit date:2019-09-23
Release date:2019-12-18
Last modified:2024-03-20
Method:ELECTRON MICROSCOPY (4.1 Å)
Cite:Cryo-EM structure of a 40 kDa SAM-IV riboswitch RNA at 3.7 angstrom resolution.
Nat Commun, 10, 2019
7JM3
DownloadVisualize
BU of 7jm3 by Molmil
Full-length three-dimensional structure of the influenza A virus M1 protein and its organization into a matrix layer
Descriptor: Matrix protein 1
Authors:Su, Z, Pintilie, G, Selzer, L, Chiu, W, Kirkegaard, K.
Deposit date:2020-07-30
Release date:2020-08-12
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Full-length three-dimensional structure of the influenza A virus M1 protein and its organization into a matrix layer.
Plos Biol., 18, 2020
6C6L
DownloadVisualize
BU of 6c6l by Molmil
Yeast Vacuolar ATPase Vo in lipid nanodisc
Descriptor: V-type proton ATPase subunit a, vacuolar isoform, V-type proton ATPase subunit c, ...
Authors:Roh, S, Stam, N.J, Hryc, C, Couoh-Cardel, S, Pintilie, G, Chiu, W, Wilkens, S.
Deposit date:2018-01-19
Release date:2018-03-21
Last modified:2024-03-13
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:The 3.5- angstrom CryoEM Structure of Nanodisc-Reconstituted Yeast Vacuolar ATPase VoProton Channel.
Mol. Cell, 69, 2018
6D00
DownloadVisualize
BU of 6d00 by Molmil
Calcarisporiella thermophila Hsp104
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Calcarisporiella thermophila Hsp104
Authors:Zhang, K, Pintilie, G.
Deposit date:2018-04-09
Release date:2019-04-03
Last modified:2024-03-13
Method:ELECTRON MICROSCOPY (4 Å)
Cite:Structure of Calcarisporiella thermophila Hsp104 Disaggregase that Antagonizes Diverse Proteotoxic Misfolding Events.
Structure, 27, 2019
9CBX
DownloadVisualize
BU of 9cbx by Molmil
Tetrahymena ribozyme with automatically identified water and magnesium ions
Descriptor: MAGNESIUM ION, RNA (387-MER)
Authors:Kretsch, R.C, Li, S, Pintilie, G, Palo, M.Z, Case, D.A, Das, R, Zhang, K, Chiu, W.
Deposit date:2024-06-20
Release date:2024-11-20
Method:ELECTRON MICROSCOPY (2.2 Å)
Cite:Complex Water Networks Visualized through 2.2-2.3 Angstrom Cryogenic Electron Microscopy of RNA
To Be Published
9CBW
DownloadVisualize
BU of 9cbw by Molmil
Tetrahymena ribozyme with consensus water and magnesium ions
Descriptor: MAGNESIUM ION, RNA (387-MER)
Authors:Kretsch, R.C, Li, S, Pintilie, G, Palo, M.Z, Case, D.A, Das, R, Zhang, K, Chiu, W.
Deposit date:2024-06-20
Release date:2024-11-20
Method:ELECTRON MICROSCOPY (2.3 Å)
Cite:Complex Water Networks Visualized through 2.2-2.3 Angstrom Cryogenic Electron Microscopy of RNA
To Be Published
9CBU
DownloadVisualize
BU of 9cbu by Molmil
Tetrahymena ribozyme with consensus water and magnesium ions
Descriptor: MAGNESIUM ION, RNA (387-MER)
Authors:Kretsch, R.C, Li, S, Pintilie, G, Palo, M.Z, Case, D.A, Das, R, Zhang, K, Chiu, W.
Deposit date:2024-06-20
Release date:2024-11-20
Method:ELECTRON MICROSCOPY (2.2 Å)
Cite:Complex Water Networks Visualized through 2.2-2.3 Angstrom Cryogenic Electron Microscopy of RNA
To Be Published
9CBY
DownloadVisualize
BU of 9cby by Molmil
Tetrahymena ribozyme with automatically identified water and magnesium ions
Descriptor: MAGNESIUM ION, RNA (387-MER)
Authors:Kretsch, R.C, Li, S, Pintilie, G, Palo, M.Z, Case, D.A, Das, R, Zhang, K, Chiu, W.
Deposit date:2024-06-20
Release date:2024-11-20
Method:ELECTRON MICROSCOPY (2.3 Å)
Cite:Complex Water Networks Visualized through 2.2-2.3 Angstrom Cryogenic Electron Microscopy of RNA
To Be Published
7UPH
DownloadVisualize
BU of 7uph by Molmil
Structure of a ribosome with tethered subunits
Descriptor: 30S ribosomal protein S10, 30S ribosomal protein S11, 30S ribosomal protein S12, ...
Authors:Kim, D.S, Watkins, A, Bidstrup, E, Lee, J, Topkar, V.V, Kofman, C, Schwarz, K.J, Liu, Y, Pintilie, G, Roney, E, Das, R, Jewett, M.C.
Deposit date:2022-04-15
Release date:2022-08-17
Last modified:2025-03-19
Method:ELECTRON MICROSCOPY (4.18 Å)
Cite:Three-dimensional structure-guided evolution of a ribosome with tethered subunits.
Nat.Chem.Biol., 18, 2022
7YC8
DownloadVisualize
BU of 7yc8 by Molmil
Cryo-EM structure of Tetrahymena ribozyme conformation 1 undergoing the first-step self-splicing
Descriptor: GUANOSINE-5'-TRIPHOSPHATE, RNA (388-MER)
Authors:Zhang, X, Li, S, Pintilie, G, Palo, M.Z, Zhang, K.
Deposit date:2022-07-01
Release date:2023-07-05
Last modified:2023-08-16
Method:ELECTRON MICROSCOPY (4.14 Å)
Cite:Snapshots of the first-step self-splicing of Tetrahymena ribozyme revealed by cryo-EM.
Nucleic Acids Res., 51, 2023
7YCI
DownloadVisualize
BU of 7yci by Molmil
Cryo-EM structure of Tetrahymena ribozyme conformation 4 undergoing the first-step self-splicing
Descriptor: GUANOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, RNA (389-MER), ...
Authors:Zhang, X, Li, S, Pintilie, G, Palo, M.Z, Zhang, K.
Deposit date:2022-07-01
Release date:2023-07-05
Last modified:2023-08-16
Method:ELECTRON MICROSCOPY (2.98 Å)
Cite:Snapshots of the first-step self-splicing of Tetrahymena ribozyme revealed by cryo-EM.
Nucleic Acids Res., 51, 2023
7YCG
DownloadVisualize
BU of 7ycg by Molmil
Cryo-EM structure of Tetrahymena ribozyme conformation 2 undergoing the first-step self-splicing
Descriptor: GUANOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, RNA (393-MER), ...
Authors:Zhang, X, Li, S, Pintilie, G, Palo, M.Z, Zhang, K.
Deposit date:2022-07-01
Release date:2023-07-05
Last modified:2023-08-16
Method:ELECTRON MICROSCOPY (3.18 Å)
Cite:Snapshots of the first-step self-splicing of Tetrahymena ribozyme revealed by cryo-EM.
Nucleic Acids Res., 51, 2023
7YCH
DownloadVisualize
BU of 7ych by Molmil
Cryo-EM structure of Tetrahymena ribozyme conformation 3 undergoing the first-step self-splicing
Descriptor: GUANOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, RNA (393-MER), ...
Authors:Zhang, X, Li, S, Pintilie, G, Palo, M.Z, Zhang, K.
Deposit date:2022-07-01
Release date:2023-07-05
Last modified:2023-08-16
Method:ELECTRON MICROSCOPY (3.09 Å)
Cite:Snapshots of the first-step self-splicing of Tetrahymena ribozyme revealed by cryo-EM.
Nucleic Acids Res., 51, 2023
7WU7
DownloadVisualize
BU of 7wu7 by Molmil
Prefoldin-tubulin-TRiC complex
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Prefoldin subunit 1, Prefoldin subunit 2, ...
Authors:Gestaut, D, Zhao, Y, Park, J, Ma, B, Leitner, A, Collier, M, Pintilie, G, Roh, S.-H, Chiu, W, Frydman, J.
Deposit date:2022-02-07
Release date:2022-12-21
Last modified:2024-06-26
Method:ELECTRON MICROSCOPY (3.85 Å)
Cite:Structural visualization of the tubulin folding pathway directed by human chaperonin TRiC/CCT.
Cell, 185, 2022
7XSN
DownloadVisualize
BU of 7xsn by Molmil
Native Tetrahymena ribozyme conformation
Descriptor: RNA (387-MER)
Authors:Li, S, Palo, M, Pintilie, G, Zhang, X, Su, Z, Kappel, K, Chiu, W, Zhang, K, Das, R.
Deposit date:2022-05-14
Release date:2022-08-03
Last modified:2024-07-03
Method:ELECTRON MICROSCOPY (3.01 Å)
Cite:Topological crossing in the misfolded Tetrahymena ribozyme resolved by cryo-EM.
Proc.Natl.Acad.Sci.USA, 119, 2022
7XSL
DownloadVisualize
BU of 7xsl by Molmil
Misfolded Tetrahymena ribozyme conformation 2
Descriptor: RNA (388-MER)
Authors:Li, S, Palo, M, Pintilie, G, Zhang, X, Su, Z, Kappel, K, Chiu, W, Zhang, K, Das, R.
Deposit date:2022-05-14
Release date:2022-08-03
Last modified:2024-07-03
Method:ELECTRON MICROSCOPY (3.84 Å)
Cite:Topological crossing in the misfolded Tetrahymena ribozyme resolved by cryo-EM.
Proc.Natl.Acad.Sci.USA, 119, 2022
7XSM
DownloadVisualize
BU of 7xsm by Molmil
Misfolded Tetrahymena ribozyme conformation 3
Descriptor: RNA (388-MER)
Authors:Li, S, Palo, M, Pintilie, G, Zhang, X, Su, Z, Kappel, K, Chiu, W, Zhang, K, Das, R.
Deposit date:2022-05-14
Release date:2022-08-03
Last modified:2024-07-03
Method:ELECTRON MICROSCOPY (4.01 Å)
Cite:Topological crossing in the misfolded Tetrahymena ribozyme resolved by cryo-EM.
Proc.Natl.Acad.Sci.USA, 119, 2022

 

1234>

234136

PDB entries from 2025-04-02

PDB statisticsPDBj update infoContact PDBjnumon