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7XZ8
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BU of 7xz8 by Molmil
Mutant (K141A) of the N-terminal domain of fucoidan lyase FdlA
Descriptor: Fucoidan lyase
Authors:Wang, J, Li, M, Pan, X.
Deposit date:2022-06-02
Release date:2022-09-28
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.89 Å)
Cite:Structural and Biochemical Analysis Reveals Catalytic Mechanism of Fucoidan Lyase from Flavobacterium sp. SA-0082.
Mar Drugs, 20, 2022
7XZA
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BU of 7xza by Molmil
Mutant (Y242F) of the N-terminal domain of fucoidan lyase FdlA
Descriptor: Fucoidan lyase FdlA
Authors:Wang, J, Li, M, Pan, X.
Deposit date:2022-06-02
Release date:2022-09-28
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.08 Å)
Cite:Structural and Biochemical Analysis Reveals Catalytic Mechanism of Fucoidan Lyase from Flavobacterium sp. SA-0082.
Mar Drugs, 20, 2022
7XZ7
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BU of 7xz7 by Molmil
Mutant (D137A) of the N-terminal domain of fucoidan lyase FdlA
Descriptor: Fucoidan lyase
Authors:Wang, J, Li, M, Pan, X.
Deposit date:2022-06-02
Release date:2022-09-28
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.98 Å)
Cite:Structural and Biochemical Analysis Reveals Catalytic Mechanism of Fucoidan Lyase from Flavobacterium sp. SA-0082.
Mar Drugs, 20, 2022
7XZC
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BU of 7xzc by Molmil
Mutant (R240A) of the N-terminal domain of fucoidan lyase FdlA
Descriptor: Fucoidan lyase
Authors:Wang, J, Li, M, Pan, X.
Deposit date:2022-06-02
Release date:2022-09-28
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structural and Biochemical Analysis Reveals Catalytic Mechanism of Fucoidan Lyase from Flavobacterium sp. SA-0082.
Mar Drugs, 20, 2022
7XZB
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BU of 7xzb by Molmil
Mutant (Y242A) of the N-terminal domain of fucoidan lyase FdlA
Descriptor: Fucoidan lyase, SULFATE ION
Authors:Wang, J, Li, M, Pan, X.
Deposit date:2022-06-02
Release date:2022-09-28
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Structural and Biochemical Analysis Reveals Catalytic Mechanism of Fucoidan Lyase from Flavobacterium sp. SA-0082.
Mar Drugs, 20, 2022
3PL9
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BU of 3pl9 by Molmil
Crystal structure of spinach minor light-harvesting complex CP29 at 2.80 angstrom resolution
Descriptor: (1R,3R)-6-{(3E,5E,7E,9E,11E,13E,15E,17E)-18-[(1S,4R,6R)-4-HYDROXY-2,2,6-TRIMETHYL-7-OXABICYCLO[4.1.0]HEPT-1-YL]-3,7,12,16-TETRAMETHYLOCTADECA-1,3,5,7,9,11,13,15,17-NONAENYLIDENE}-1,5,5-TRIMETHYLCYCLOHEXANE-1,3-DIOL, (3R,3'R,6S)-4,5-DIDEHYDRO-5,6-DIHYDRO-BETA,BETA-CAROTENE-3,3'-DIOL, (3S,5R,6S,3'S,5'R,6'S)-5,6,5',6'-DIEPOXY-5,6,5',6'- TETRAHYDRO-BETA,BETA-CAROTENE-3,3'-DIOL, ...
Authors:Pan, X.W, Li, M, Wan, T, Wang, L.F, Jia, C.J, Hou, Z.Q, Zhao, X.L, Zhang, J.P, Chang, W.R.
Deposit date:2010-11-14
Release date:2011-02-09
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structural insights into energy regulation of light-harvesting complex CP29 from spinach.
Nat.Struct.Mol.Biol., 18, 2011
5ZJI
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BU of 5zji by Molmil
Structure of photosystem I supercomplex with light-harvesting complexes I and II
Descriptor: (1R,3R)-6-{(3E,5E,7E,9E,11E,13E,15E,17E)-18-[(1S,4R,6R)-4-HYDROXY-2,2,6-TRIMETHYL-7-OXABICYCLO[4.1.0]HEPT-1-YL]-3,7,12,16-TETRAMETHYLOCTADECA-1,3,5,7,9,11,13,15,17-NONAENYLIDENE}-1,5,5-TRIMETHYLCYCLOHEXANE-1,3-DIOL, (3R,3'R,6S)-4,5-DIDEHYDRO-5,6-DIHYDRO-BETA,BETA-CAROTENE-3,3'-DIOL, (3S,5R,6S,3'S,5'R,6'S)-5,6,5',6'-DIEPOXY-5,6,5',6'- TETRAHYDRO-BETA,BETA-CAROTENE-3,3'-DIOL, ...
Authors:Pan, X.W, Ma, J, Su, X.D, Cao, P, Liu, Z.F, Zhang, X.Z, Li, M.
Deposit date:2018-03-20
Release date:2018-06-20
Last modified:2019-11-06
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Structure of the maize photosystem I supercomplex with light-harvesting complexes I and II.
Science, 360, 2018
6AGF
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BU of 6agf by Molmil
Structure of the human voltage-gated sodium channel Nav1.4 in complex with beta1
Descriptor: (3beta,14beta,17beta,25R)-3-[4-methoxy-3-(methoxymethyl)butoxy]spirost-5-en, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Pan, X.J, li, Z.Q, Zhou, Q, Shen, H.Z, Wu, K, Huang, X.S, Chen, J.F, Zhang, J.R, Zhu, X.C, Lei, J.L, Xiong, W, Gong, H.P, Xiao, B.L, Yan, N.
Deposit date:2018-08-11
Release date:2018-10-10
Last modified:2020-07-29
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Structure of the human voltage-gated sodium channel Nav1.4 in complex with beta 1.
Science, 362, 2018
5YLX
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BU of 5ylx by Molmil
Integrated illustration of a valid epitope based on the SLA class I structure and tetramer technique could carry forward the development of molecular vaccine in swine species
Descriptor: Beta-2-microglobulin, MHC class I antigen, PRRSV-NSP9-TMP9 peptide
Authors:Pan, X.C, Wei, X.H, Zhang, N, Xia, C.
Deposit date:2017-10-20
Release date:2018-10-24
Last modified:2020-05-06
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Illumination of PRRSV Cytotoxic T Lymphocyte Epitopes by the Three-Dimensional Structure and Peptidome of Swine Lymphocyte Antigen Class I (SLA-I).
Front Immunol, 10, 2019
7XQ4
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BU of 7xq4 by Molmil
Drimenyl diphosphate synthase from Streptomyces showdoensis (apo)
Descriptor: SQHop_cyclase_C domain-containing protein
Authors:Pan, X.M, Du, W.Y, Yang, Q, Zhang, B, Dong, L.B.
Deposit date:2022-05-06
Release date:2023-03-15
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.58 Å)
Cite:Discovery, Structure, and Mechanism of a Class II Sesquiterpene Cyclase.
J.Am.Chem.Soc., 144, 2022
7XRU
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BU of 7xru by Molmil
Drimenyl diphosphate synthase D303E from Streptomyces showdoensis in complex with 2-fluorofarnesyl diphosphate (2F-FPP) and Mg2+
Descriptor: (2E,6E)-2-fluoro-3,7,11-trimethyldodeca-2,6,10-trien-1-yl trihydrogen diphosphate, MAGNESIUM ION, SQHop_cyclase_C domain-containing protein
Authors:Pan, X.M, Du, W.Y, Yang, Q, Zhang, B, Dong, L.B.
Deposit date:2022-05-11
Release date:2023-03-15
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Discovery, Structure, and Mechanism of a Class II Sesquiterpene Cyclase.
J.Am.Chem.Soc., 144, 2022
7XR7
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BU of 7xr7 by Molmil
Drimenyl diphosphate synthase D303E from Streptomyces showdoensis in complex with farnesyl diphosphate (FPP) and Mg2+
Descriptor: FARNESYL DIPHOSPHATE, MAGNESIUM ION, SQHop_cyclase_C domain-containing protein
Authors:Pan, X.M, Du, W.Y, Yang, Q, Zhang, B, Dong, L.B.
Deposit date:2022-05-09
Release date:2023-03-15
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.63 Å)
Cite:Discovery, Structure, and Mechanism of a Class II Sesquiterpene Cyclase.
J.Am.Chem.Soc., 144, 2022
7XQZ
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BU of 7xqz by Molmil
Drimenyl diphosphate synthase D303A from Streptomyces showdoensis in complex with 2-fluorofarnesyl diphosphate (2F-FPP) and Mg2+
Descriptor: (2Z,6E)-2-fluoro-3,7,11-trimethyldodeca-2,6,10-trien-1-yl trihydrogen diphosphate, MAGNESIUM ION, SQHop_cyclase_C domain-containing protein
Authors:Pan, X.M, Du, W.Y, Yang, Q, Zhang, B, Dong, L.B.
Deposit date:2022-05-09
Release date:2023-03-15
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2 Å)
Cite:Discovery, Structure, and Mechanism of a Class II Sesquiterpene Cyclase.
J.Am.Chem.Soc., 144, 2022
7XRA
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BU of 7xra by Molmil
Drimenyl diphosphate synthase D303A from Streptomyces showdoensis in complex with farnesyl diphosphate (FPP) and Mg2+
Descriptor: FARNESYL DIPHOSPHATE, MAGNESIUM ION, SQHop_cyclase_C domain-containing protein
Authors:Pan, X.M, Du, W.Y, Yang, Q, Zhang, B, Dong, L.B.
Deposit date:2022-05-09
Release date:2023-03-15
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Discovery, Structure, and Mechanism of a Class II Sesquiterpene Cyclase.
J.Am.Chem.Soc., 144, 2022
8HJB
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BU of 8hjb by Molmil
Crystal structure of Pseudomonas aeruginosa PvrA with coenzyme A
Descriptor: COENZYME A, TetR family transcriptional regulator
Authors:Liang, H, Bartlam, M.
Deposit date:2022-11-23
Release date:2023-02-08
Last modified:2023-08-02
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:Regulatory and structural mechanisms of PvrA-mediated regulation of the PQS quorum-sensing system and PHA biosynthesis in Pseudomonas aeruginosa.
Nucleic Acids Res., 51, 2023
7E0H
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BU of 7e0h by Molmil
LHCII-1 in the state transition supercomplex PSI-LHCI-LHCII from the LhcbM1 lacking mutant of Chlamydomonas reinhardtii
Descriptor: (1R,3R)-6-{(3E,5E,7E,9E,11E,13E,15E,17E)-18-[(1S,4R,6R)-4-HYDROXY-2,2,6-TRIMETHYL-7-OXABICYCLO[4.1.0]HEPT-1-YL]-3,7,12,16-TETRAMETHYLOCTADECA-1,3,5,7,9,11,13,15,17-NONAENYLIDENE}-1,5,5-TRIMETHYLCYCLOHEXANE-1,3-DIOL, (3R,3'R,6S)-4,5-DIDEHYDRO-5,6-DIHYDRO-BETA,BETA-CAROTENE-3,3'-DIOL, (3S,5R,6S,3'S,5'R,6'S)-5,6,5',6'-DIEPOXY-5,6,5',6'- TETRAHYDRO-BETA,BETA-CAROTENE-3,3'-DIOL, ...
Authors:Pan, X.W, Li, A.J, Liu, Z.F, Li, M.
Deposit date:2021-01-28
Release date:2021-06-30
Last modified:2021-09-01
Method:ELECTRON MICROSCOPY (3.75 Å)
Cite:Structural basis of LhcbM5-mediated state transitions in green algae.
Nat.Plants, 7, 2021
7DZ8
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BU of 7dz8 by Molmil
State transition supercomplex PSI-LHCI-LHCII from the LhcbM1 lacking mutant of Chlamydomonas reinhardtii
Descriptor: (1R,3R)-6-{(3E,5E,7E,9E,11E,13E,15E,17E)-18-[(1S,4R,6R)-4-HYDROXY-2,2,6-TRIMETHYL-7-OXABICYCLO[4.1.0]HEPT-1-YL]-3,7,12,16-TETRAMETHYLOCTADECA-1,3,5,7,9,11,13,15,17-NONAENYLIDENE}-1,5,5-TRIMETHYLCYCLOHEXANE-1,3-DIOL, (3R,3'R,6S)-4,5-DIDEHYDRO-5,6-DIHYDRO-BETA,BETA-CAROTENE-3,3'-DIOL, (3S,5R,6S,3'S,5'R,6'S)-5,6,5',6'-DIEPOXY-5,6,5',6'- TETRAHYDRO-BETA,BETA-CAROTENE-3,3'-DIOL, ...
Authors:Pan, X.W, Li, A.J, Liu, Z.F, Li, M.
Deposit date:2021-01-23
Release date:2021-06-30
Last modified:2021-09-01
Method:ELECTRON MICROSCOPY (3.16 Å)
Cite:Structural basis of LhcbM5-mediated state transitions in green algae.
Nat.Plants, 7, 2021
7E0J
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BU of 7e0j by Molmil
LHCII-1 in the state transition supercomplex PSI-LHCI-LHCII from the double phosphatase mutant pph1;pbcp of Chlamydomonas reinhardti.
Descriptor: (1R,3R)-6-{(3E,5E,7E,9E,11E,13E,15E,17E)-18-[(1S,4R,6R)-4-HYDROXY-2,2,6-TRIMETHYL-7-OXABICYCLO[4.1.0]HEPT-1-YL]-3,7,12,16-TETRAMETHYLOCTADECA-1,3,5,7,9,11,13,15,17-NONAENYLIDENE}-1,5,5-TRIMETHYLCYCLOHEXANE-1,3-DIOL, (3R,3'R,6S)-4,5-DIDEHYDRO-5,6-DIHYDRO-BETA,BETA-CAROTENE-3,3'-DIOL, (3S,5R,6S,3'S,5'R,6'S)-5,6,5',6'-DIEPOXY-5,6,5',6'- TETRAHYDRO-BETA,BETA-CAROTENE-3,3'-DIOL, ...
Authors:Pan, X.W, Li, A.J, Liu, Z.F, Li, M.
Deposit date:2021-01-28
Release date:2021-06-30
Last modified:2021-09-01
Method:ELECTRON MICROSCOPY (3.13 Å)
Cite:Structural basis of LhcbM5-mediated state transitions in green algae.
Nat.Plants, 7, 2021
7DZ7
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BU of 7dz7 by Molmil
State transition supercomplex PSI-LHCI-LHCII from double phosphatase mutant pph1;pbcp of green alga Chlamydomonas reinhardtii
Descriptor: (1R,3R)-6-{(3E,5E,7E,9E,11E,13E,15E,17E)-18-[(1S,4R,6R)-4-HYDROXY-2,2,6-TRIMETHYL-7-OXABICYCLO[4.1.0]HEPT-1-YL]-3,7,12,16-TETRAMETHYLOCTADECA-1,3,5,7,9,11,13,15,17-NONAENYLIDENE}-1,5,5-TRIMETHYLCYCLOHEXANE-1,3-DIOL, (3R,3'R,6S)-4,5-DIDEHYDRO-5,6-DIHYDRO-BETA,BETA-CAROTENE-3,3'-DIOL, (3S,5R,6S,3'S,5'R,6'S)-5,6,5',6'-DIEPOXY-5,6,5',6'- TETRAHYDRO-BETA,BETA-CAROTENE-3,3'-DIOL, ...
Authors:Pan, X.W, Li, A.J, Liu, Z.F, Li, M.
Deposit date:2021-01-23
Release date:2021-06-30
Last modified:2021-09-01
Method:ELECTRON MICROSCOPY (2.84 Å)
Cite:Structural basis of LhcbM5-mediated state transitions in green algae.
Nat.Plants, 7, 2021
7E0K
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BU of 7e0k by Molmil
LHCII-2 in the state transition supercomplex PSI-LHCI-LHCII from the double phosphatase mutant pph1;pbcp of Chlamydomonas reinhardti.
Descriptor: (1R,3R)-6-{(3E,5E,7E,9E,11E,13E,15E,17E)-18-[(1S,4R,6R)-4-HYDROXY-2,2,6-TRIMETHYL-7-OXABICYCLO[4.1.0]HEPT-1-YL]-3,7,12,16-TETRAMETHYLOCTADECA-1,3,5,7,9,11,13,15,17-NONAENYLIDENE}-1,5,5-TRIMETHYLCYCLOHEXANE-1,3-DIOL, (3R,3'R,6S)-4,5-DIDEHYDRO-5,6-DIHYDRO-BETA,BETA-CAROTENE-3,3'-DIOL, (3S,5R,6S,3'S,5'R,6'S)-5,6,5',6'-DIEPOXY-5,6,5',6'- TETRAHYDRO-BETA,BETA-CAROTENE-3,3'-DIOL, ...
Authors:Pan, X.W, Li, A.J, Liu, Z.F, Li, M.
Deposit date:2021-01-28
Release date:2021-06-30
Last modified:2021-09-01
Method:ELECTRON MICROSCOPY (3.09 Å)
Cite:Structural basis of LhcbM5-mediated state transitions in green algae.
Nat.Plants, 7, 2021
7E0I
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BU of 7e0i by Molmil
LHCII-2 in the state transition supercomplex PSI-LHCI-LHCII from the LhcbM1 lacking mutant of Chlamydomonas reinhardti
Descriptor: (1R,3R)-6-{(3E,5E,7E,9E,11E,13E,15E,17E)-18-[(1S,4R,6R)-4-HYDROXY-2,2,6-TRIMETHYL-7-OXABICYCLO[4.1.0]HEPT-1-YL]-3,7,12,16-TETRAMETHYLOCTADECA-1,3,5,7,9,11,13,15,17-NONAENYLIDENE}-1,5,5-TRIMETHYLCYCLOHEXANE-1,3-DIOL, (3R,3'R,6S)-4,5-DIDEHYDRO-5,6-DIHYDRO-BETA,BETA-CAROTENE-3,3'-DIOL, (3S,5R,6S,3'S,5'R,6'S)-5,6,5',6'-DIEPOXY-5,6,5',6'- TETRAHYDRO-BETA,BETA-CAROTENE-3,3'-DIOL, ...
Authors:Pan, X.W, Li, A.J, Liu, Z.F, Li, M.
Deposit date:2021-01-28
Release date:2021-06-30
Last modified:2021-09-01
Method:ELECTRON MICROSCOPY (3.53 Å)
Cite:Structural basis of LhcbM5-mediated state transitions in green algae.
Nat.Plants, 7, 2021
5YR0
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BU of 5yr0 by Molmil
Structure of Beclin1-UVRAG coiled coil domain complex
Descriptor: Beclin-1, UV radiation resistance associated protein
Authors:Pan, X, Zhao, Y, He, Y.
Deposit date:2017-11-08
Release date:2018-06-13
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Targeting the potent Beclin 1-UVRAG coiled-coil interaction with designed peptides enhances autophagy and endolysosomal trafficking.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
7Y0Y
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BU of 7y0y by Molmil
Crystal structure of Pseudomonas aeruginosa PvrA (SeMet)
Descriptor: TetR family transcriptional regulator
Authors:Liang, H, Zhang, Q, Bartlam, M.
Deposit date:2022-06-06
Release date:2023-02-08
Last modified:2023-08-02
Method:X-RAY DIFFRACTION (2.09 Å)
Cite:Regulatory and structural mechanisms of PvrA-mediated regulation of the PQS quorum-sensing system and PHA biosynthesis in Pseudomonas aeruginosa.
Nucleic Acids Res., 51, 2023
7Y0Z
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BU of 7y0z by Molmil
Crystal structure of Pseudomonas aeruginosa PvrA
Descriptor: TetR family transcriptional regulator
Authors:Liang, H, Zhang, Q, Bartlam, M.
Deposit date:2022-06-06
Release date:2023-02-08
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Regulatory and structural mechanisms of PvrA-mediated regulation of the PQS quorum-sensing system and PHA biosynthesis in Pseudomonas aeruginosa.
Nucleic Acids Res., 51, 2023
4WUZ
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BU of 4wuz by Molmil
Crystal structure of lambda exonuclease in complex with DNA and Ca2+
Descriptor: CALCIUM ION, DNA (5'-D(*TP*T*TP*CP*GP*GP*TP*AP*CP*AP*GP*TP*AP*G)-3'), DNA (5'-D(P*AP*GP*CP*TP*AP*CP*TP*GP*TP*AP*CP*CP*GP*A)-3'), ...
Authors:Zhang, J, Bell, C.E.
Deposit date:2014-11-04
Release date:2014-11-19
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.38 Å)
Cite:Crystal Structure of lambda Exonuclease in Complex with DNA and Ca(2+).
Biochemistry, 53, 2014

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