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2ZMZ
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BU of 2zmz by Molmil
The 1.37-A crystal structure of the hydroxylamine-induced deoxy-form of the copper-bound tyrosinase in complex with a caddie protein from Streptomyces castaneoglobisporus
Descriptor: CADDIE, COPPER (I) ION, NITRATE ION, ...
Authors:Matoba, Y, Sugiyama, M.
Deposit date:2008-04-21
Release date:2009-05-05
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.37 Å)
Cite:X-Ray Snapshots of a Hydroxylation Mechanism of Tyrosinase
To be Published
2ZWD
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BU of 2zwd by Molmil
Crystal structure of the copper-bound tyrosinase in complex with a caddie protein from streptomyces castaneoglobisporus obtained by soaking the deoxy-form crystal in dioxygen-saturated solution for 5 minutes
Descriptor: COPPER (I) ION, MelC, NITRATE ION, ...
Authors:Matoba, Y, Sugiyama, M.
Deposit date:2008-12-03
Release date:2009-12-15
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:Crystallographic evidence of drastic movement of a copper ion toward the substrate tyrosine for starting hydroxylation reaction of tyrosinase
To be Published
2ZMY
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BU of 2zmy by Molmil
Crystal structure of the met2-form of the copper-bound tyrosinase in complex with a caddie protein from Streptomyces castaneoglobisporus obtained by soaking in cupric sulfate solution for 80 hours
Descriptor: CADDIE, COPPER (II) ION, NITRATE ION, ...
Authors:Matoba, Y, Sugiyama, M.
Deposit date:2008-04-21
Release date:2009-05-05
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:X-Ray Snapshots of a Hydroxylation Mechanism of Tyrosinase
To be Published
2ZWG
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BU of 2zwg by Molmil
Crystal structure of the copper-bound tyrosinase in complex with a caddie protein from streptomyces castaneoglobisporus obtained by soaking the deoxy-form crystal in dioxygen-saturated solution for 12 hours
Descriptor: COPPER (II) ION, MelC, NITRATE ION, ...
Authors:Matoba, Y, Sugiyama, M.
Deposit date:2008-12-03
Release date:2009-12-15
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.32 Å)
Cite:Crystallographic evidence of drastic movement of a copper ion toward the substrate tyrosine for starting hydroxylation reaction of tyrosinase
To be Published
2ZW7
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BU of 2zw7 by Molmil
Crystal structure of bleomycin N-acetyltransferase complexed with bleomycin A2 and coenzyme A
Descriptor: BLEOMYCIN A2, Bleomycin acetyltransferase, COENZYME A
Authors:Oda, K, Matoba, Y, Sugiyama, M.
Deposit date:2008-12-01
Release date:2009-11-03
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Catalytic mechanism of bleomycin N-acetyltransferase proposed on the basis of its crystal structure.
J.Biol.Chem., 285, 2010
2ZW5
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BU of 2zw5 by Molmil
Crystal structure of bleomycin N-acetyltransferase complexed with coenzyme A in the trigonal crystal
Descriptor: Bleomycin acetyltransferase, COENZYME A
Authors:Oda, K, Matoba, Y, Sugiyama, M.
Deposit date:2008-12-01
Release date:2009-11-03
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Catalytic mechanism of bleomycin N-acetyltransferase proposed on the basis of its crystal structure.
J.Biol.Chem., 285, 2010
2ZW6
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BU of 2zw6 by Molmil
Crystal structure of bleomycin N-acetyltransferase from bleomycin-producing Streptomyces verticillus ATCC15003
Descriptor: Bleomycin acetyltransferase, SULFATE ION
Authors:Oda, K, Matoba, Y, Sugiyama, M.
Deposit date:2008-12-01
Release date:2009-11-03
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Catalytic mechanism of bleomycin N-acetyltransferase proposed on the basis of its crystal structure.
J.Biol.Chem., 285, 2010
2ZW4
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BU of 2zw4 by Molmil
Crystal structure of bleomycin N-acetyltransferase complexed with coenzyme A in the orthorhombic crystal
Descriptor: Bleomycin acetyltransferase, COENZYME A, SULFATE ION
Authors:Oda, K, Matoba, Y, Sugiyama, M.
Deposit date:2008-12-01
Release date:2009-11-03
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Catalytic mechanism of bleomycin N-acetyltransferase proposed on the basis of its crystal structure.
J.Biol.Chem., 285, 2010
3WSW
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BU of 3wsw by Molmil
Crystal structure of minor L-lactate dehydrogenase from Enterococcus mundtii in the ligands-bound form
Descriptor: 1,6-di-O-phosphono-beta-D-fructofuranose, GLYCEROL, L-lactate dehydrogenase, ...
Authors:Matoba, Y, Sugiyama, M.
Deposit date:2014-03-27
Release date:2014-09-10
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:An alternative allosteric regulation mechanism of an acidophilic l-lactate dehydrogenase from Enterococcus mundtii 15-1A.
Febs Open Bio, 4, 2014
3WSV
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BU of 3wsv by Molmil
Crystal structure of minor L-lactate dehydrogenase from Enterococcus mundtii in the ligands-unbound form
Descriptor: GLYCEROL, L-lactate dehydrogenase
Authors:Matoba, Y, Sugiyama, M.
Deposit date:2014-03-27
Release date:2014-09-10
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.38 Å)
Cite:An alternative allosteric regulation mechanism of an acidophilic l-lactate dehydrogenase from Enterococcus mundtii 15-1A.
Febs Open Bio, 4, 2014
5DSV
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BU of 5dsv by Molmil
Crystal structure of human proteasome alpha7 tetradecamer
Descriptor: Proteasome subunit alpha type-3
Authors:Satoh, T, Thammaporn, R, Seetaha, S, Kato, K.
Deposit date:2015-09-17
Release date:2015-12-02
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (3.75 Å)
Cite:Disassembly of the self-assembled, double-ring structure of proteasome alpha 7 homo-tetradecamer by alpha 6
Sci Rep, 5, 2015
3WA6
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BU of 3wa6 by Molmil
Crystal structure of tannase from Lactobacillus plantarum in the orthorhombic crystal
Descriptor: SULFATE ION, tannase
Authors:Matoba, Y, Tanaka, N, Sugiyama, M.
Deposit date:2013-04-27
Release date:2013-07-24
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystallographic and mutational analyses of tannase from Lactobacillus plantarum
Proteins, 81, 2013
3WA7
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BU of 3wa7 by Molmil
Crystal structure of selenomethionine-labeled tannase from Lactobacillus plantarum in the orthorhombic crystal
Descriptor: ACETATE ION, GLYCEROL, SULFATE ION, ...
Authors:Matoba, Y, Tanaka, N, Sugiyama, M.
Deposit date:2013-04-27
Release date:2013-07-24
Last modified:2013-11-06
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystallographic and mutational analyses of tannase from Lactobacillus plantarum.
Proteins, 81, 2013
3WCK
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BU of 3wck by Molmil
Crystal structure of monomeric photosensitizing fluorescent protein, Supernova
Descriptor: Monomeric photosenitizing fluorescent protein supernova
Authors:Sakai, N, Matsuda, T, Takemoto, K, Nagai, T.
Deposit date:2013-05-27
Release date:2013-10-02
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:SuperNova, a monomeric photosensitizing fluorescent protein for chromophore-assisted light inactivation
Sci Rep, 3, 2013
3AFC
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BU of 3afc by Molmil
Mouse Semaphorin 6A extracellular domain
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Semaphorin-6A
Authors:Yasui, N, Nogi, T, Mihara, E, Takagi, J.
Deposit date:2010-02-26
Release date:2010-10-06
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structural basis for semaphorin signalling through the plexin receptor.
Nature, 467, 2010
3AL8
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BU of 3al8 by Molmil
Plexin A2 / Semaphorin 6A complex
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Plexin-A2, ...
Authors:Nogi, T, Yasui, N, Mihara, E, Takagi, J.
Deposit date:2010-07-28
Release date:2010-10-06
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (3.6 Å)
Cite:Structural basis for semaphorin signalling through the plexin receptor.
Nature, 467, 2010
3AL9
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BU of 3al9 by Molmil
Mouse Plexin A2 extracellular domain
Descriptor: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, Plexin-A2
Authors:Nogi, T, Yasui, N, Mihara, E, Takagi, J.
Deposit date:2010-07-28
Release date:2010-10-06
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural basis for semaphorin signalling through the plexin receptor.
Nature, 467, 2010
2ZMX
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BU of 2zmx by Molmil
Crystal structure of the met1-form of the copper-bound tyrosinase in complex with a caddie protein from Streptomyces castaneoglobisporus obtained by soaking in cupric sulfate solution for 36 hours
Descriptor: CADDIE, COPPER (II) ION, NITRATE ION, ...
Authors:Matoba, Y, Sugiyama, M.
Deposit date:2008-04-21
Release date:2009-04-07
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.33 Å)
Cite:Crystallographic Evidence That the Dinuclear Copper Center of Tyrosinase Is Flexible during Catalysis
J.Biol.Chem., 281, 2006
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