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2VRD
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THE STRUCTURE OF THE ZINC FINGER FROM THE HUMAN SPLICEOSOMAL PROTEIN U1C
分子名称: U1 SMALL NUCLEAR RIBONUCLEOPROTEIN C, ZINC ION
著者Muto, Y, Pomeranz-Krummel, D, Oubridge, C, Hernandez, H, Robinson, C, Neuhaus, D, Nagai, K.
登録日2008-03-31
公開日2008-04-08
最終更新日2011-07-13
実験手法SOLUTION NMR
主引用文献The Structure and Biochemical Properties of the Human Spliceosomal Protein U1C
J.Mol.Biol., 341, 2004
6LR2
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SOLUTION STRUCTURE OF THE YTH DOMAIN IN YTH DOMAIN-2 CONTAINING PROTEIN 2
分子名称: YTH domain containing protein 2 (YTHDC2)
著者Muto, Y, Kobayashi, N, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2020-01-15
公開日2021-01-20
最終更新日2023-06-14
実験手法SOLUTION NMR
主引用文献SOLUTION STRUCTURE OF THE YTH DOMAIN IN YTH DOMAIN-CONTAINING PROTEIN 2
TO BE PUBLISHED
7VH9
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Solution structure of the chimeric peptide of the first SURP domain of Human SF3A1 and the interacting region of SF1.
分子名称: Splicing factor 3A subunit 1,Splicing factor 1
著者Muto, Y, Kuwasako, K, Takizawa, M, Kobayashi, N, Sakamoto, T.
登録日2021-09-21
公開日2022-09-28
最終更新日2023-10-25
実験手法SOLUTION NMR
主引用文献Structural basis for the interaction between the first SURP domain of the SF3A1 subunit in U2 snRNP and the human splicing factor SF1.
Protein Sci., 31, 2022
7FBV
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The solution structure of the second RRM domain of Matrin-3
分子名称: Matrin-3
著者Muto, Y, Kobayashi, N, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2021-07-13
公開日2022-02-16
最終更新日2023-06-14
実験手法SOLUTION NMR
主引用文献1 H, 13 C and 15 N resonance assignments and solution structures of the two RRM domains of Matrin-3.
Biomol.Nmr Assign., 16, 2022
7FBR
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Solution structure of The first RNA binding domain of Matrin-3
分子名称: Matrin-3
著者Muto, Y, Kobayashi, N, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2021-07-12
公開日2022-02-16
最終更新日2023-06-14
実験手法SOLUTION NMR
主引用文献1 H, 13 C and 15 N resonance assignments and solution structures of the two RRM domains of Matrin-3.
Biomol.Nmr Assign., 16, 2022
1AA9
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HUMAN C-HA-RAS(1-171)(DOT)GDP, NMR, MINIMIZED AVERAGE STRUCTURE
分子名称: C-HA-RAS, GUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION
著者Ito, Y, Yamasaki, Y, Muto, Y, Kawai, G, Nishimura, S, Miyazawa, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日1997-01-27
公開日1997-07-29
最終更新日2022-02-16
実験手法SOLUTION NMR
主引用文献Regional polysterism in the GTP-bound form of the human c-Ha-Ras protein.
Biochemistry, 36, 1997
1B7F
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SXL-LETHAL PROTEIN/RNA COMPLEX
分子名称: PROTEIN (SXL-LETHAL PROTEIN), RNA (5'-R(P*GP*UP*UP*GP*UP*UP*UP*UP*UP*UP*UP*U)-3')
著者Handa, N, Nureki, O, Kurimoto, K, Kim, I, Sakamoto, H, Shimura, Y, Muto, Y, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日1999-01-23
公開日1999-05-03
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Structural basis for recognition of the tra mRNA precursor by the Sex-lethal protein.
Nature, 398, 1999
7X9U
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Type-II KH motif of human mitochondrial RbfA
分子名称: Putative ribosome-binding factor A, mitochondrial
著者Kuwasako, K, Suzuki, S, Furue, M, Takizawa, M, Takahashi, M, Tsuda, K, Nagata, T, Watanabe, S, Tanaka, A, Kobayashi, N, Kigawa, T, Guntert, P, Shirouzu, M, Yokoyama, S, Muto, Y, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2022-03-16
公開日2023-01-25
実験手法SOLUTION NMR
主引用文献1 H, 13 C, and 15 N resonance assignments and solution structures of the KH domain of human ribosome binding factor A, mtRbfA, involved in mitochondrial ribosome biogenesis.
Biomol.Nmr Assign., 16, 2022
1K2G
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Structural basis for the 3'-terminal guanosine recognition by the group I intron
分子名称: 5'-R(*CP*AP*GP*AP*CP*UP*UP*CP*GP*GP*UP*CP*GP*CP*AP*GP*AP*GP*AP*UP*GP*G)-3'
著者Kitamura, Y, Muto, Y, Watanabe, S, Kim, I, Ito, T, Nishiya, Y, Sakamoto, K, Ohtsuki, T, Kawai, G, Watanabe, K, Hosono, K, Takaku, H, Katoh, E, Yamazaki, T, Inoue, T, Yokoyama, S.
登録日2001-09-27
公開日2002-05-08
最終更新日2022-02-23
実験手法SOLUTION NMR
主引用文献Solution structure of an RNA fragment with the P7/P9.0 region and the 3'-terminal guanosine of the tetrahymena group I intron.
RNA, 8, 2002
2FHO
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NMR solution structure of the human spliceosomal protein complex p14-SF3b155
分子名称: spliceosomal protein SF3b155, spliceosomal protein p14
著者Kuwasako, K, Dohmae, N, Inoue, M, Shirouzu, M, Guntert, P, Seraphin, B, Muto, Y, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2005-12-26
公開日2006-12-26
最終更新日2022-03-09
実験手法SOLUTION NMR
主引用文献NMR solution structure of the human spliceosomal protein complex p14-SF3b155
To be Published
2FC7
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Solution structure of the ZZ domain of ZZZ3 protein
分子名称: ZINC ION, ZZZ3 protein
著者Dang, W, Muto, Y, Inoue, M, Shirouzu, M, Terada, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2005-12-12
公開日2006-06-12
最終更新日2022-03-09
実験手法SOLUTION NMR
主引用文献Solution structure of the ZZ domain of ZZZ3 protein
To be published
2FC9
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Solution structure of the RRM_1 domain of NCL protein
分子名称: NCL protein
著者Dang, W, Muto, Y, Inoue, M, Kigawa, T, Shirouzu, M, Terada, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2005-12-12
公開日2006-06-12
最終更新日2022-03-09
実験手法SOLUTION NMR
主引用文献Solution structure of the RRM_1 domain of NCL protein
To be published
2FC8
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Solution structure of the RRM_1 domain of NCL protein
分子名称: NCL protein
著者Dang, W, Muto, Y, Inoue, M, Kigawa, T, Shirouzu, M, Terada, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2005-12-12
公開日2006-06-12
最終更新日2022-03-09
実験手法SOLUTION NMR
主引用文献Solution structure of the RRM_1 domain of NCL protein
To be published
2MGZ
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Solution structure of RBFOX family ASD-1 RRM and SUP-12 RRM in ternary complex with RNA
分子名称: Protein ASD-1, isoform a, Protein SUP-12, ...
著者Takahashi, M, Kuwasako, K, Unzai, S, Tsuda, K, Yoshikawa, S, He, F, Kobayashi, N, Guntert, P, Shirouzu, M, Ito, T, Tanaka, A, Yokoyama, S, Hagiwara, M, Kuroyanagi, H, Muto, Y.
登録日2013-11-12
公開日2014-08-13
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献RBFOX and SUP-12 sandwich a G base to cooperatively regulate tissue-specific splicing
Nat.Struct.Mol.Biol., 21, 2014
1HZD
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CRYSTAL STRUCTURE OF HUMAN AUH PROTEIN, AN RNA-BINDING HOMOLOGUE OF ENOYL-COA HYDRATASE
分子名称: AU-BINDING PROTEIN/ENOYL-COA HYDRATASE
著者Kurimoto, K, Fukai, S, Nureki, O, Muto, Y, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2001-01-24
公開日2001-12-12
最終更新日2023-08-09
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Crystal structure of human AUH protein, a single-stranded RNA binding homolog of enoyl-CoA hydratase.
Structure, 9, 2001
2FYH
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Solution structure of the 2'-5' RNA ligase-like protein from Pyrococcus furiosus
分子名称: putative integral membrane transport protein
著者Okada, K, Matsuda, T, Sakamoto, T, Muto, Y, Yokoyama, S, Kanai, A, Kawai, G, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2006-02-08
公開日2007-02-20
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献Characterization of a heat-stable enzyme possessing GTP-dependent RNA ligase activity from a hyperthermophilic archaeon, Pyrococcus furiosus
Rna, 15, 2009
5GVQ
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Solution structure of the first RRM domain of human spliceosomal protein SF3b49
分子名称: Splicing factor 3B subunit 4
著者Kuwasako, K, Nameki, N, Tsuda, K, Takahashi, M, Sato, A, Tochio, N, Inoue, M, Terada, T, Kigawa, T, Kobayashi, N, Shirouzu, M, Ito, T, Sakamoto, T, Wakamatsu, K, Guntert, P, Takahashi, S, Yokoyama, S, Muto, Y, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2016-09-06
公開日2017-04-12
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献Solution structure of the first RNA recognition motif domain of human spliceosomal protein SF3b49 and its mode of interaction with a SF3b145 fragment.
Protein Sci., 26, 2017
2GGF
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Solution structure of the MA3 domain of human Programmed cell death 4
分子名称: Programmed cell death 4, isoform 1
著者Nagata, T, Muto, Y, Inoue, M, Kigawa, T, Terada, T, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2006-03-24
公開日2007-04-24
最終更新日2022-03-09
実験手法SOLUTION NMR
主引用文献Solution structure of the MA3 domain of human Programmed cell death 4
To be Published
2KHE
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Solution Structure of the Bacterial Toxin Rele from Thermus Thermophilus HB8
分子名称: Toxin-like protein
著者Suzuki, S, Kawazoe, M, Kaminishi, T, Takemoto, C, Muto, Y, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2009-04-03
公開日2010-03-31
最終更新日2021-11-10
実験手法SOLUTION NMR
主引用文献Solution Structure of the Bacterial Toxin Rele from Thermus Thermophilus HB8
To be Published
1D8Z
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SOLUTION STRUCTURE OF THE FIRST RNA-BINDING DOMAIN (RBD1) OF HU ANTIGEN C (HUC)
分子名称: HU ANTIGEN C
著者Inoue, M, Muto, Y, Sakamoto, H, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日1999-10-26
公開日2000-04-07
最終更新日2022-02-16
実験手法SOLUTION NMR
主引用文献NMR studies on functional structures of the AU-rich element-binding domains of Hu antigen C.
Nucleic Acids Res., 28, 2000
1D9A
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SOLUTION STRUCTURE OF THE SECOND RNA-BINDING DOMAIN (RBD2) OF HU ANTIGEN C (HUC)
分子名称: HU ANTIGEN C
著者Inoue, M, Muto, Y, Sakamoto, H, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日1999-10-26
公開日2000-04-07
最終更新日2022-02-16
実験手法SOLUTION NMR
主引用文献NMR studies on functional structures of the AU-rich element-binding domains of Hu antigen C.
Nucleic Acids Res., 28, 2000
1FNX
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SOLUTION STRUCTURE OF THE HUC RBD1-RBD2 COMPLEXED WITH THE AU-RICH ELEMENT
分子名称: AU-RICH RNA ELEMENT, HU ANTIGEN C
著者Inoue, M, Hirao, M, Kasashima, K, Kim, I.-S, Kawai, G, Kigawa, T, Sakamoto, H, Muto, Y, Yokoyama, S.
登録日2000-08-24
公開日2003-06-24
最終更新日2022-02-23
実験手法SOLUTION NMR
主引用文献Solution structure of mouse HuC RNA-binding domains complexed with an AU-Rich element reveals determinants of neuronal differentiation
To be Published, 2000
2SXL
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SEX-LETHAL RBD1, NMR, MINIMIZED AVERAGE STRUCTURE
分子名称: SEX-LETHAL PROTEIN
著者Inoue, M, Muto, Y, Sakamoto, H, Kigawa, T, Takio, K, Shimura, Y, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日1997-07-16
公開日1998-07-22
最終更新日2021-11-03
実験手法SOLUTION NMR
主引用文献A characteristic arrangement of aromatic amino acid residues in the solution structure of the amino-terminal RNA-binding domain of Drosophila sex-lethal.
J.Mol.Biol., 272, 1997
2RNE
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Solution structure of the second RNA recognition motif (RRM) of TIA-1
分子名称: Tia1 protein
著者Takahashi, M, Kuwasako, K, Abe, C, Tsuda, K, Inoue, M, Terada, T, Shirouzu, M, Kobayashi, N, Kigawa, T, Taguchi, S, Guntert, P, Hayashizaki, Y, Tanaka, A, Muto, Y, Yokoyama, S.
登録日2007-12-19
公開日2008-11-04
最終更新日2022-03-16
実験手法SOLUTION NMR
主引用文献Solution structure of the second RNA recognition motif (RRM) domain of murine T cell intracellular antigen-1 (TIA-1) and its RNA recognition mode
Biochemistry, 47, 2008
2ROK
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Solution structure of the cap-binding domain of PARN complexed with the cap analog
分子名称: 7N-METHYL-8-HYDROGUANOSINE-5'-MONOPHOSPHATE, GUANOSINE-5'-DIPHOSPHATE, poly(A)-specific ribonuclease
著者Nagata, T, Suzuki, S, Endo, R, Shirouzu, M, Terada, T, Inoue, M, Kigawa, T, Guntert, P, Hayashizaki, Y, Muto, Y, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2008-03-28
公開日2009-02-10
最終更新日2022-03-16
実験手法SOLUTION NMR
主引用文献The RRM domain of poly(A)-specific ribonuclease has a noncanonical binding site for mRNA cap analog recognition.
Nucleic Acids Res., 36, 2008

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