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5E2Q
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BU of 5e2q by Molmil
Structure of human DPP3 in complex with angiotensin-II
Descriptor: Dipeptidyl peptidase 3, MAGNESIUM ION, POTASSIUM ION, ...
Authors:Kumar, P, Reisinger, M, Reithofer, V, Gruber, K.
Deposit date:2015-10-01
Release date:2016-04-13
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.404 Å)
Cite:Substrate complexes of human dipeptidyl peptidase III reveal the mechanism of enzyme inhibition.
Sci Rep, 6, 2016
1I6B
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BU of 1i6b by Molmil
STRUCTURE OF EQUINE APOLACTOFERRIN AT 3.2 A RESOLUTION USING CRYSTALS GROWN AT 303K
Descriptor: LACTOTRANSFERRIN
Authors:Kumar, P, Yadav, S, Singh, T.P.
Deposit date:2001-03-02
Release date:2002-02-13
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Crystal structure of equine apolactoferrin at 303 K providing further evidence of closed conformations of N and C lobes.
Acta Crystallogr.,Sect.D, 58, 2002
1JW1
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BU of 1jw1 by Molmil
Crystallization and structure determination of goat lactoferrin at 4.0 resolution: A new form of packing in lactoferrins with a high solvent content in crystals
Descriptor: FE (III) ION, LACTOFERRIN
Authors:Kumar, P, Yadav, S, Singh, T.P.
Deposit date:2001-09-02
Release date:2003-04-29
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (4 Å)
Cite:Crystallization and structure determonation of goat lactoferrin at 4.0A resolution: A new form of packing in lactoferrins with a high solvent content in crystals
INDIAN J.BIOCHEM.BIOPHYS., 39, 2002
2XR8
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BU of 2xr8 by Molmil
Crystal structure of biphenyl dioxygenase from Burkholderia xenovorans LB400
Descriptor: BIPHENYL DIOXYGENASE SUBUNIT ALPHA, BIPHENYL DIOXYGENASE SUBUNIT BETA, FE (II) ION, ...
Authors:Kumar, P, Bolin, J.T.
Deposit date:2010-09-12
Release date:2010-11-24
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.49 Å)
Cite:Structural Insight Into the Expanded Pcb-Degrading Abilities of a Biphenyl Dioxygenase Obtained by Directed Evolution.
J.Mol.Biol., 405, 2011
2XSO
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BU of 2xso by Molmil
CRYSTAL STRUCTURE OF P4 VARIANT OF BIPHENYL DIOXYGENASE FROM BURKHOLDERIA XENOVORANS LB400
Descriptor: BIPHENYL DIOXYGENASE SUBUNIT ALPHA, BIPHENYL DIOXYGENASE SUBUNIT BETA, FE (II) ION, ...
Authors:Kumar, P, Bolin, J.T.
Deposit date:2010-09-29
Release date:2010-11-24
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structural Insight Into the Expanded Pcb-Degrading Abilities of a Biphenyl Dioxygenase Obtained by Directed Evolution.
J.Mol.Biol., 405, 2011
2XSH
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BU of 2xsh by Molmil
CRYSTAL STRUCTURE OF P4 VARIANT OF BIPHENYL DIOXYGENASE FROM BURKHOLDERIA XENOVORANS LB400 IN COMPLEX WITH 2,6 DI CHLOROBIPHENYL
Descriptor: 2,6-DICHLOROBIPHENYL, BIPHENYL DIOXYGENASE SUBUNIT ALPHA, BIPHENYL DIOXYGENASE SUBUNIT BETA, ...
Authors:Kumar, P, Bolin, J.T.
Deposit date:2010-09-29
Release date:2010-11-24
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.29 Å)
Cite:Structural Insight Into the Expanded Pcb-Degrading Abilities of a Biphenyl Dioxygenase Obtained by Directed Evolution.
J.Mol.Biol., 405, 2011
2XRX
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BU of 2xrx by Molmil
CRYSTAL STRUCTURE OF BIPHENYL DIOXYGENASE IN COMPLEX WITH BIPHENYL FROM BURKHOLDERIA XENOVORANS LB400
Descriptor: BIPHENYL, BIPHENYL DIOXYGENASE SUBUNIT ALPHA, BIPHENYL DIOXYGENASE SUBUNIT BETA, ...
Authors:Kumar, P, Bolin, J.T.
Deposit date:2010-09-23
Release date:2010-11-24
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.42 Å)
Cite:Structural Insight Into the Expanded Pcb-Degrading Abilities of a Biphenyl Dioxygenase Obtained by Directed Evolution.
J.Mol.Biol., 405, 2011
2YFL
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BU of 2yfl by Molmil
Crystal Structure of Biphenyl dioxygenase variant RR41 with 2-chloro dibenzofuran
Descriptor: 2-CHLORODIBENZOFURAN, BIPHENYL DIOXYGENASE SUBUNIT ALPHA, BIPHENYL DIOXYGENASE SUBUNIT BETA, ...
Authors:Kumar, P, Bolin, J.T.
Deposit date:2011-04-06
Release date:2012-05-16
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structural Insights Into the Metabolism of 2-Chlorodibenzofuran by an Evolved Biphenyl Dioxygenase.
Biochem.Biophys.Res.Commun., 421, 2012
8B45
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BU of 8b45 by Molmil
Structure of CC-Tri with Aib@b,c: CC-Tri-(UbUc)4
Descriptor: 1,2-ETHANEDIOL, CC-Tri-(UbUc)4, SODIUM ION, ...
Authors:Kumar, P, Martin, F.J.O, Dawson, W.M, Zieleniewski, F, Woolfson, D.N.
Deposit date:2022-09-19
Release date:2023-09-27
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structure of CC-Tri with Aib@b,c: CC-Tri-(UbUc)4
To Be Published
8BFD
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BU of 8bfd by Molmil
Racemic structure of PK-7 (310HD-U2U5)
Descriptor: 310HD-U2U5, D-310HD-U2U5, DI(HYDROXYETHYL)ETHER, ...
Authors:Kumar, P, Paterson, N.G, Woolfson, D.N.
Deposit date:2022-10-25
Release date:2022-11-23
Method:X-RAY DIFFRACTION (2 Å)
Cite:De novo design of discrete, stable 3 10 -helix peptide assemblies.
Nature, 607, 2022
8BFE
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BU of 8bfe by Molmil
A dimeric de novo coiled-coil assembly: PK-2 (CC-TypeN-LaUbUcLd)
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, 1,2-ETHANEDIOL, CC-TypeN-LaUbUcLd, ...
Authors:Kumar, P, Paterson, N.G, Woolfson, D.N.
Deposit date:2022-10-25
Release date:2022-11-23
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:De novo design of discrete, stable 3 10 -helix peptide assemblies.
Nature, 607, 2022
3H3U
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BU of 3h3u by Molmil
Crystal structure of CRP (cAMP receptor Protein) from Mycobacterium tuberculosis
Descriptor: ADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE, PROBABLE TRANSCRIPTIONAL REGULATORY PROTEIN (PROBABLY CRP/FNR-FAMILY), SULFATE ION
Authors:Kumar, P, Joshi, D.C, Akif, M, Akhter, Y, Hasnain, S.E, Mande, S.C.
Deposit date:2009-04-17
Release date:2010-02-02
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Mapping conformational transitions in cyclic AMP receptor protein: crystal structure and normal-mode analysis of Mycobacterium tuberculosis apo-cAMP receptor protein
Biophys.J., 98, 2010
5UWV
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BU of 5uwv by Molmil
Crystal structure of Mycobacterium abscessus L,D-transpeptidase 2
Descriptor: L,D-TRANSPEPTIDASE 2
Authors:Kumar, P, Ginell, S.L, Lamichhane, G.
Deposit date:2017-02-21
Release date:2017-08-16
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.98 Å)
Cite:Mycobacterium abscessus l,d-Transpeptidases Are Susceptible to Inactivation by Carbapenems and Cephalosporins but Not Penicillins.
Antimicrob. Agents Chemother., 61, 2017
3LS6
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BU of 3ls6 by Molmil
Crystal structure of 3,4-Dihydroxy-2-butanone 4-phosphate synthase in complex with sulfate and zinc
Descriptor: 3,4-Dihydroxy-2-butanone 4-phosphate synthase, GLYCEROL, MAGNESIUM ION, ...
Authors:Kumar, P, Karthikeyan, S.
Deposit date:2010-02-12
Release date:2010-09-15
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.86 Å)
Cite:Potential anti-bacterial drug target: structural characterization of 3,4-dihydroxy-2-butanone-4-phosphate synthase from Salmonella typhimurium LT2.
Proteins, 78, 2010
3BP4
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BU of 3bp4 by Molmil
The high resolution crystal structure of HLA-B*2705 in complex with a Cathepsin A signal sequence peptide pCatA
Descriptor: Beta-2-microglobulin, GLYCEROL, HLA class I histocompatibility antigen, ...
Authors:Kumar, P, Vahedi-Faridi, A, Saenger, W, Uchanska-Ziegler, B, Ziegler, A.
Deposit date:2007-12-18
Release date:2008-12-23
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Structural basis for T cell alloreactivity among three HLA-B14 and HLA-B27 antigens
J.Biol.Chem., 284, 2009
3BP7
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BU of 3bp7 by Molmil
The high resolution crystal structure of HLA-B*2709 in complex with a Cathepsin A signal sequence peptide, pCatA
Descriptor: Beta-2-microglobulin, GLYCEROL, HLA class I histocompatibility antigen, ...
Authors:Kumar, P, Vahedi-Faridi, A, Saenger, W, Uchanska-Ziegler, B, Ziegler, A.
Deposit date:2007-12-18
Release date:2008-12-23
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural basis for T cell alloreactivity among three HLA-B14 and HLA-B27 antigens
J.Biol.Chem., 284, 2009
3BXN
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BU of 3bxn by Molmil
The high resolution crystal structure of HLA-B*1402 complexed with a Cathepsin A signal sequence peptide, pCatA
Descriptor: Cathepsin A signal sequence octapeptide, GLYCEROL, HLA-B*1402 extracellular domain, ...
Authors:Kumar, P, Vahedi-Faridi, A, Saenger, W, Uchanska-Ziegler, B, Ziegler, A.
Deposit date:2008-01-14
Release date:2009-02-03
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.864 Å)
Cite:Structural basis for T cell alloreactivity among three HLA-B14 and HLA-B27 antigens
J.Biol.Chem., 284, 2009
3D55
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BU of 3d55 by Molmil
Crystal structure of M. tuberculosis YefM antitoxin
Descriptor: SULFATE ION, Uncharacterized protein Rv3357/MT3465
Authors:Kumar, P, Issac, B, Dodson, E.J, Turkenberg, J.P, Mande, S.C.
Deposit date:2008-05-15
Release date:2008-12-02
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.13 Å)
Cite:Crystal structure of Mycobacterium tuberculosis YefM antitoxin reveals that it is not an intrinsically unstructured protein
J.Mol.Biol., 383, 2008
3CTO
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BU of 3cto by Molmil
Crystal Structure of M. tuberculosis YefM antitoxin
Descriptor: SULFATE ION, Uncharacterized protein Rv3357/MT3465
Authors:Kumar, P, Issac, B, Dodson, E.J, Turkenberg, J.P, Mande, S.C.
Deposit date:2008-04-14
Release date:2008-12-02
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal structure of Mycobacterium tuberculosis YefM antitoxin reveals that it is not an intrinsically unstructured protein
J.Mol.Biol., 383, 2008
3LQU
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BU of 3lqu by Molmil
Crystal structure of 3,4-Dihydroxy-2-butanone 4-phosphate synthase complexed with Ribulose-5 phosphate
Descriptor: 3,4-dihydroxy-2-butanone 4-phosphate synthase, 5-O-phosphono-D-xylulose
Authors:Kumar, P, Karthikeyan, S.
Deposit date:2010-02-10
Release date:2010-09-15
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.522 Å)
Cite:Potential anti-bacterial drug target: structural characterization of 3,4-dihydroxy-2-butanone-4-phosphate synthase from Salmonella typhimurium LT2.
Proteins, 78, 2010
3LRJ
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BU of 3lrj by Molmil
Crystal structure of 3,4-Dihydroxy-2-butanone 4-phosphate synthase in complex with sulfate ion.
Descriptor: 3,4-Dihydroxy-2-butanone 4-phosphate synthase, SULFATE ION
Authors:Kumar, P, Karthikeyan, S.
Deposit date:2010-02-11
Release date:2010-09-15
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.803 Å)
Cite:Potential anti-bacterial drug target: structural characterization of 3,4-dihydroxy-2-butanone-4-phosphate synthase from Salmonella typhimurium LT2.
Proteins, 78, 2010
3MK3
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BU of 3mk3 by Molmil
Crystal structure of Lumazine synthase from Salmonella typhimurium LT2
Descriptor: 6,7-dimethyl-8-ribityllumazine synthase, SULFATE ION
Authors:Kumar, P, Singh, M, Karthikeyan, S.
Deposit date:2010-04-14
Release date:2011-02-02
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (3.569 Å)
Cite:Crystal structure analysis of icosahedral lumazine synthase from Salmonella typhimurium, an antibacterial drug target.
Acta Crystallogr.,Sect.D, 67, 2011
3NQ4
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BU of 3nq4 by Molmil
30mer structure of Lumazine synthase from Salmonella typhimurium LT2
Descriptor: 6,7-dimethyl-8-ribityllumazine synthase, SULFATE ION
Authors:Kumar, P, Singh, M, Karthikeyan, S.
Deposit date:2010-06-29
Release date:2011-06-08
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (3.5 Å)
Cite:Crystal structure of Lumazine synthase from Salmonella typhimurium LT2
To be Published
5DUJ
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BU of 5duj by Molmil
Crystal structure of ldtMt2 in complex with Faropenem adduct
Descriptor: (2R,5R)-2-[(2S,3R)-3-hydroxy-1-oxobutan-2-yl]-5-[(2R)-tetrahydrofuran-2-yl]-2,5-dihydro-1,3-thiazole-4-carboxylic acid, BETA-MERCAPTOETHANOL, L,D-transpeptidase 2, ...
Authors:Kumar, P, Lamichhane, G.
Deposit date:2015-09-18
Release date:2016-09-28
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.17 Å)
Cite:Non-classical transpeptidases yield insight into new antibacterials.
Nat. Chem. Biol., 13, 2017
5DU7
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BU of 5du7 by Molmil
Crystal structure of ldtMt2 at 1.79 Angstrom resolution
Descriptor: L,D-transpeptidase 2
Authors:Kumar, P, Lamichhane, G.
Deposit date:2015-09-18
Release date:2016-09-28
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.79 Å)
Cite:Non-classical transpeptidases yield insight into new antibacterials.
Nat. Chem. Biol., 13, 2017

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